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References from Tokenization and deep learning architectures in genomics: A comprehensive review. Local targets link to admitted publications; unresolved targets remain external evidence.
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2025 · External reference
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Prokaryotic gene prediction using Genemark and Genemark.hmm
2003 · External reference
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Genome modeling and design across all domains of life with Evo 2
2025 · External reference
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2020 · External reference
Quantized multi-task learning for context-specific representations of gene network dynamics
2024 · External reference
Self-supervised learning on millions of primary RNA sequences from 72 vertebrates improves sequence-based RNA splicing prediction
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Novel transformer networks for improved sequence labeling in genomics
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10.18653/v1/p19-1285
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Nucleotide transformer: building and evaluating robust foundation models for human genomics
2024 · External reference
Unresolved reference
2019 · External reference
Protein2Text: providing rich descriptions for protein sequences
2024 · External reference
Prottrans: toward understanding the language of life through self-supervised learning
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External reference
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External reference
ViBE: a hierarchical BERT model to identify eukaryotic viruses using metagenome sequencing data
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2024 · External reference
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2022 · External reference
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2023 · External reference
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2001 · External reference
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2023 · External reference
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2025 · External reference
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10.1093/nar/gkw226 · 2016 · External reference
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2018 · External reference
Exploring the limits of transfer learning with a unified text-to-text transformer
2020 · External reference
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10.1007/s40484-019-0187-4 · External reference
Use of profile hidden Markov models in viral discovery: current insights
10.2147/agg.s136574 · 2017 · External reference
Biological structure and function emerge from scaling unsupervised learning to 250 million protein sequences
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2024 · External reference
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2012 · External reference
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2016 · External reference
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10.1093/bioinformatics/btae243 · 2024 · External reference
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10.1016/j.neucom.2023.127063 · External reference
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2017 · External reference
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10.1162/neco.1989.1.2.270 · External reference
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2007 · External reference
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2019 · External reference
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2025 · External reference
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2024 · External reference
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