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References from Evolutionary trajectory estimation via replication simulation of coronavirus spike gene based on random mutation and similarity-based selection. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/nature12861
10.1038/nature12861 · External reference
10.1128/jvi.00593-16
10.1128/jvi.00593-16 · External reference
10.21105/joss.03773
10.21105/joss.03773 · External reference
10.1093/molbev/msab327
10.1093/molbev/msab327 · External reference
10.1093/molbev/msp063
10.1093/molbev/msp063 · External reference
10.1093/bioinformatics/btp163
10.1093/bioinformatics/btp163 · External reference
10.1073/pnas.2010146117
10.1073/pnas.2010146117 · External reference
10.1371/journal.pbio.3000003
10.1371/journal.pbio.3000003 · External reference
10.1093/nar/gkh340
10.1093/nar/gkh340 · External reference
10.1128/jvi.79.18.11555-11558.2005
10.1128/jvi.79.18.11555-11558.2005 · External reference
10.1002/gch2.1018
10.1002/gch2.1018 · External reference
Genotype to phenotype Japan (G2P-Japan) consortium; ito J, sato K. Determination of the factors responsible for the tropism of SARS-CoV-2-related bat coronaviruses to rhinolophus bat ACE2
10.1128/jvi.00990-23 · 2023 · External reference
10.1534/genetics.112.141291
10.1534/genetics.112.141291 · External reference
10.1016/j.celrep.2022.110770
10.1016/j.celrep.2022.110770 · External reference
10.1093/bioinformatics/bty407
10.1093/bioinformatics/bty407 · External reference
Predicting the antigenic evolution of SARS-COV-2 with deep learning
10.1038/s41467-023-39199-6 · 2023 · External reference
10.1109/mcse.2007.55
10.1109/mcse.2007.55 · External reference
COG-UK) consortium; loman NJ, connor TR, robertson DL, pybus OG, rambaut A. Generation and transmission of interlineage recombinants in the SARS-CoV-2 pandemic
10.1016/j.cell.2021.08.014 · 2021 · External reference
10.1093/ve/vez003
10.1093/ve/vez003 · External reference
Comparison of genome replication fidelity between SARS-CoV-2 and influenza a virus in cell culture
10.1038/s41598-023-40463-4 · 2023 · External reference
GISAID's role in pandemic response
10.46234/ccdcw2021.255 · 2021 · External reference
10.1038/s41586-020-2180-5
10.1038/s41586-020-2180-5 · External reference
10.1093/nar/gkab301
10.1093/nar/gkab301 · External reference
10.1126/sciadv.abb9153
10.1126/sciadv.abb9153 · External reference
Genomic comparisons of alphacoronaviruses and betacoronaviruses from Korean bats
10.3390/v14071389 · 2022 · External reference
10.1093/genetics/28.6.491
10.1093/genetics/28.6.491 · External reference
10.1016/j.coviro.2017.10.008
10.1016/j.coviro.2017.10.008 · External reference
10.1016/j.celrep.2019.11.070
10.1016/j.celrep.2019.11.070 · External reference
Salvador luria and max Delbrück on random mutation and fluctuation tests
10.1534/genetics.115.186163 · 2016 · External reference
10.1093/molbev/msu300
10.1093/molbev/msu300 · External reference
Molecular basis of cross-species ACE2 interactions with SARS-CoV-2-like viruses of pangolin origin
10.15252/embj.2021109962 · 2022 · External reference
SARS-CoV-2 omicron variants harbor spike protein mutations responsible for their attenuated fusogenic phenotype
10.1038/s42003-023-04923-x · 2023 · External reference
10.1038/s41564-021-00908-w
10.1038/s41564-021-00908-w · External reference
10.1038/s41564-020-0770-5
10.1038/s41564-020-0770-5 · External reference
10.1007/s00018-016-2299-6
10.1007/s00018-016-2299-6 · External reference
10.1128/jvi.00694-10
10.1128/jvi.00694-10 · External reference
10.1002/j.1538-7305.1948.tb01338.x
10.1002/j.1538-7305.1948.tb01338.x · External reference
GISAID: global initiative on sharing all influenza data - from vision to reality
2017 · External reference
10.1371/journal.pbio.0050094
10.1371/journal.pbio.0050094 · External reference
10.1038/s41579-018-0120-2
10.1038/s41579-018-0120-2 · External reference
10.1038/s41586-022-04532-4
10.1038/s41586-022-04532-4 · External reference
Molecular characterization and phylogenetic analysis of new variants of the porcine epidemic diarrhea virus in gansu, China in 2012
10.3390/v5081991 · 2013 · External reference
10.1016/j.coviro.2012.07.007
10.1016/j.coviro.2012.07.007 · External reference
10.1038/s41467-021-21006-9
10.1038/s41467-021-21006-9 · External reference
Broad host range of SARS-CoV-2 and the molecular basis for SARS-CoV-2 binding to cat ACE2
10.1038/s41421-020-00210-9 · 2020 · External reference
Global dynamics of porcine enteric coronavirus PEDV epidemiology, evolution, and transmission
10.1093/molbev/msad052 · 2023 · External reference
10.1038/s41586-020-2012-7
10.1038/s41586-020-2012-7 · External reference