Contact and support
Need help, have a question, or want to contact the ResearchHub team?
© 2026 ResearchHub. Built for responsible scholarly connection.
Privacy-aware community infrastructureResearch graph
References from A quartet-based approach for inferring phylogenetically informative features from genomic and phenomic data. Local targets link to admitted publications; unresolved targets remain external evidence.
Primer, pipelines, parameters: issues in 16s rrna gene sequencing
10.1128/msphere.01202-20 · 2021 · External reference
Deep learning approaches to the phylogenetic placement of extinct pollen morphotypes
10.1093/pnasnexus/pgad419 · 2024 · External reference
Split decomposition: a new and useful approach to phylogenetic analysis of distance data
10.1016/1055-7903(92)90021-8 · 1992 · External reference
10.1109/tpami.2013.50
10.1109/tpami.2013.50 · External reference
Unresolved reference
2013 · External reference
10.1371/journal.pcbi.1010240
10.1371/journal.pcbi.1010240 · External reference
Unresolved reference
1994 · External reference
10.1093/molbev/msh018
10.1093/molbev/msh018 · External reference
Unresolved reference
2017 · External reference
10.1101/gr.849004
10.1101/gr.849004 · External reference
Ghost: recovering historical signal from heterotachously evolved sequence alignments
2020 · External reference
A new method for counting reproductive structures in digitized herbarium specimens using mask r-cnn
10.3389/fpls.2020.01129 · 2020 · External reference
10.1016/j.cell.2022.03.034
10.1016/j.cell.2022.03.034 · External reference
Unresolved reference
2018 · External reference
Opportunities and challenges in applying ai to evolutionary morphology
10.1093/iob/obae036 · 2024 · External reference
10.1016/s0022-2836(02)00308-x
10.1016/s0022-2836(02)00308-x · External reference
10.1007/bf00818163
10.1007/bf00818163 · External reference
10.1126/sciadv.aaw4967
10.1126/sciadv.aaw4967 · External reference
10.1093/molbev/msj030
10.1093/molbev/msj030 · External reference
10.1080/10635150490468648
10.1080/10635150490468648 · External reference
10.1038/s41586-021-03819-2
10.1038/s41586-021-03819-2 · External reference
Machine learning can be as good as maximum likelihood when reconstructing phylogenetic trees and determining the best evolutionary model on four taxon alignments
10.1016/j.ympev.2024.108181 · 2024 · External reference
Models of molecular evolution and phylogeny
10.1101/gr.8.12.1233 · 1998 · External reference
10.1006/jmbi.1999.2700
10.1006/jmbi.1999.2700 · External reference
10.1016/j.sbi.2006.05.010
10.1016/j.sbi.2006.05.010 · External reference
Applications of machine learning in phylogenetics
10.1016/j.ympev.2024.108066 · 2024 · External reference
A review of deep learning applications for genomic selection
10.1186/s12864-020-07319-x · 2021 · External reference
10.1093/gbe/evz193
10.1093/gbe/evz193 · External reference
Phyloformer: fast, accurate, and versatile phylogenetic reconstruction with deep neural networks
10.1093/molbev/msaf051 · 2025 · External reference
10.1038/s41576-022-00532-2
10.1038/s41576-022-00532-2 · External reference
10.1093/nar/gks1219
10.1093/nar/gks1219 · External reference
Unresolved reference
2000 · External reference
10.1101/2022.11.09.515828
10.1101/2022.11.09.515828 · External reference
The neighbor-joining method: a new method for reconstructing phylogenetic trees
1987 · External reference
Unresolved reference
2015 · External reference
Unresolved reference
External reference
Clustal omega
10.1002/0471250953.bi0313s48 · 2014 · External reference
Distributions of tree comparison metrics—some new results
1993 · External reference
Reconstructing trees when sequence sites evolve at variable rates
10.1089/cmb.1994.1.153 · 1994 · External reference
Quartet puzzling: a quartet maximum-likelihood method for reconstructing tree topologies
10.1093/oxfordjournals.molbev.a025664 · 1996 · External reference
Accurate inference of tree topologies from multiple sequence alignments using deep learning
10.1093/sysbio/syz060 · 2020 · External reference
10.1093/bioinformatics/btz921
10.1093/bioinformatics/btz921 · External reference
Some probabilistic and statistical problems in the analysis of dna sequences
1986 · External reference
A deep learning approach for morphological feature extraction based on variational auto-encoder: an application to mandible shape
10.1038/s41540-023-00293-6 · 2023 · External reference
10.1111/2041-210x.13075
10.1111/2041-210x.13075 · External reference
Fusang: a framework for phylogenetic tree inference via deep learning
10.1093/nar/gkad805 · 2023 · External reference
10.1093/molbev/msz307
10.1093/molbev/msz307 · External reference
