Research graph
References from Beyond sequence: A physics-informed machine learning framework for predicting DNA mutations. Local targets link to admitted publications; unresolved targets remain external evidence.
Unresolved reference
2009 · External reference
Individual-specific ‘fingerprints’ of human dna
10.1038/316076a0 · 1985 · External reference
Two-dimensional dna fingerprinting of human individuals
10.1073/pnas.86.8.2742 · 1989 · External reference
10.1038/nrg3539
10.1038/nrg3539 · External reference
10.1016/j.neuron.2024.12.001
10.1016/j.neuron.2024.12.001 · External reference
Women twice as likely to develop Alzheimer's disease as men-but scientists do not know why
2025 · External reference
Epilepsy, psychiatry, and neurology
10.1111/j.1528-1167.2009.02039.x · 2009 · External reference
10.1016/s0300-483x(03)00150-1
10.1016/s0300-483x(03)00150-1 · External reference
10.1126/science.373122
10.1126/science.373122 · External reference
Side effects of gadolinium MRI contrast agents
10.15557/pimr.2020.0008 · 2020 · External reference
10.1007/s12026-019-9066-3
10.1007/s12026-019-9066-3 · External reference
10.3390/biology10020070
10.3390/biology10020070 · External reference
The effect of magnetic field gradient and gadolinium-based mri contrast agent dotarem on mouse macrophages
10.3390/cells11050757 · 2022 · External reference
10.1101/cshperspect.a012559
10.1101/cshperspect.a012559 · External reference
10.1007/978-3-540-72494-0
10.1007/978-3-540-72494-0 · 2007 · External reference
Some effective tight-binding models for electrons in dna conduction: a review
10.1155/2010/380710 · 2010 · External reference
10.1021/ja9609821
10.1021/ja9609821 · External reference
10.1038/382731a0
10.1038/382731a0 · External reference
10.1021/ja907669c
10.1021/ja907669c · External reference
Charge transport in dna, current opinion in structural
2002 · External reference
10.1146/annurev.biochem.71.083101.134037
10.1146/annurev.biochem.71.083101.134037 · External reference
10.1371/journal.pgen.1003816
10.1371/journal.pgen.1003816 · External reference
Proton tunneling in dna and its biological implications
10.1103/revmodphys.35.724 · 1963 · External reference
Oxidized, deaminated cytosines are a source of c→ t transitions in vivo
10.1073/pnas.95.7.3578 · 1998 · External reference
10.1016/j.mrrev.2014.11.002
10.1016/j.mrrev.2014.11.002 · External reference
10.1016/j.ebiom.2017.04.022
10.1016/j.ebiom.2017.04.022 · External reference
Binary complex crystal structure of dna polymerase β reveals multiple conformations of the templating 8-oxoguanine lesion
10.1073/pnas.1112235108 · 2012 · External reference
10.1038/s12276-022-00822-z
10.1038/s12276-022-00822-z · External reference
10.3390/ijms21218360
10.3390/ijms21218360 · External reference
The structure of crystals containing a hydrogen-bonded complex of 1-methylthymine and 9-methyladenine
10.1107/s0365110x59002389 · 1959 · External reference
Relation between dna ionization potentials, single base substitutions and pathogenic variants
10.1186/s12864-019-5867-y · 2019 · External reference
10.1016/j.pbiomolbio.2019.03.004
10.1016/j.pbiomolbio.2019.03.004 · External reference
10.1021/acs.jcim.2c01525
10.1021/acs.jcim.2c01525 · External reference
10.1007/s13538-018-0554-z
10.1007/s13538-018-0554-z · External reference
Tuning the optical properties of phenanthriplatin: towards new photoactivatable analogues
10.1002/cptc.201700090 · 2017 · External reference
10.1126/science.1088759
10.1126/science.1088759 · External reference
10.1038/171737a0
10.1038/171737a0 · External reference
10.3390/molecules24224044
10.3390/molecules24224044 · External reference
10.1073/pnas.1619809114
10.1073/pnas.1619809114 · External reference
Localization of electronic states in finite ladder models: participation ratio and localization length as measures of the wave-function extension
10.1103/physrevb.78.235404 · 2008 · External reference
Computational DNA hole spectroscopy: a new tool to predict mutation hotspots, critical base pairs and disease ‘driver’ mutations
10.1038/srep13571 · 2015 · External reference
Influence of electron–holes on dna sequence-specific mutation rates
10.1093/gbe/evy060 · 2018 · External reference
Sequencing-independent delocalization in a dna-like double chain with base pairing
10.1103/physrevlett.95.126601 · 2005 · External reference
Unresolved reference
2022 · External reference
Seismic compressive sensing by generative inpainting network: toward an optimized acquisition survey
10.1190/tle38120923.1 · 2019 · External reference
10.1023/a:1010933404324
10.1023/a:1010933404324 · External reference
10.1007/978-0-387-84858-7
10.1007/978-0-387-84858-7 · 2009 · External reference
10.1016/j.mssp.2024.109002
10.1016/j.mssp.2024.109002 · External reference
Unresolved reference
2019 · External reference
Deep learning for 3d seismic compressive-sensing technique: a novel approach
10.1190/tle38090698.1 · 2019 · External reference
10.1038/s41576-021-00389-x
10.1038/s41576-021-00389-x · External reference
Predicting gene expression from dna sequence using deep learning models
2025 · External reference
10.1038/s41576-023-00636-3
10.1038/s41576-023-00636-3 · External reference
10.1073/pnas.97.1.262
10.1073/pnas.97.1.262 · External reference
10.1142/9789812799623_0053
10.1142/9789812799623_0053 · 2001 · External reference
10.1101/gr.121905.111
10.1101/gr.121905.111 · External reference
Random forests for genetic association studies, statistical applications in genetics and molecular
2011 · External reference
10.1007/978-3-540-71701-0_21
10.1007/978-3-540-71701-0_21 · 2007 · External reference
Gene selection and classification of microarray data using random forest
10.1186/1471-2105-7-3 · 2006 · External reference
Transformers and genome language models
2025 · External reference
Attention is all you need
2017 · External reference
10.1038/s41592-024-02523-z
10.1038/s41592-024-02523-z · External reference
A transformer architecture based on bert and 2d convolutional neural network to identify dna enhancers from sequence information
10.1093/bib/bbab005 · 2021 · External reference
mtdna variation and analysis using mitomap and mitomaster
2013 · External reference
10.1126/science.287.5460.2017
10.1126/science.287.5460.2017 · External reference
10.1002/ijc.1375
10.1002/ijc.1375 · External reference
Extensive somatic mitochondrial mutations in primary prostate cancer using laser capture microdissection
2002 · External reference
Mitochondrial dna mutations and mitochondrial dna depletion in gastric cancer
10.1002/gcc.20213 · 2005 · External reference
10.1038/sj.onc.1209607
10.1038/sj.onc.1209607 · External reference
Limited clinical relevance of mitochondrial dna mutation and gene expression analyses in ovarian cancer
10.1186/1471-2407-8-292 · 2008 · External reference
10.1038/jhg.2010.76
10.1038/jhg.2010.76 · External reference
Heteroplasmic substitutions in the mitochondrial dna control region in mother and child samples
10.1007/s004140050193 · 1998 · External reference
10.1038/sj.onc.1204646
10.1038/sj.onc.1204646 · External reference
10.1016/s1567-7249(03)00028-x
10.1016/s1567-7249(03)00028-x · External reference
10.1111/j.1474-9726.2009.00505.x
10.1111/j.1474-9726.2009.00505.x · External reference
Site-specific somatic mitochondrial dna point mutations in patients with thymidine phosphorylase deficiency
10.1172/jci17828 · 2003 · External reference
High incidence of somatic mitochondrial dna mutations in human ovarian carcinomas
2001 · External reference
Mitochondrial dna mutations and mitochondrial dna depletion in breast cancer
10.1002/gcc.20326 · 2006 · External reference
10.1038/s41588-019-0557-x
10.1038/s41588-019-0557-x · External reference
