Research graph
References from DrugDomain 2.0: Comprehensive database of protein domains-ligands/drugs interactions across the whole Protein Data Bank. Local targets link to admitted publications; unresolved targets remain external evidence.
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10.1006/jsbi.2001.4335 · External reference
10.1016/j.str.2006.11.009
10.1016/j.str.2006.11.009 · External reference
10.1093/nar/gkz1064
10.1093/nar/gkz1064 · External reference
CATH 2024: CATH-AlphaFlow doubles the number of structures in CATH and reveals nearly 200 new folds
10.1016/j.jmb.2024.168551 · 2024 · External reference
10.1093/nar/gkae1029
10.1093/nar/gkae1029 · External reference
10.1371/journal.pcbi.1011586
10.1371/journal.pcbi.1011586 · External reference
10.1038/s41586-024-07487-w
10.1038/s41586-024-07487-w · External reference
Classification of domains in predicted structures of the human proteome
10.1073/pnas.2214069120 · 2023 · External reference
10.1126/science.adq4946
10.1126/science.adq4946 · External reference
10.1093/nar/gkad1011
10.1093/nar/gkad1011 · External reference
Pan-cancer structurome reveals overrepresentation of beta sandwiches and underrepresentation of alpha helical domains
10.1038/s41598-023-39273-5 · 2023 · External reference
10.1038/s41594-022-00849-w
10.1038/s41594-022-00849-w · External reference
DrugDomain: the evolutionary context of drugs and small molecules bound to domains
10.1002/pro.5116 · 2024 · External reference
Leveraging AI to explore structural contexts of post-translational modifications in drug binding
10.1186/s13321-025-01019-y · 2025 · External reference
10.1093/nar/28.1.235
10.1093/nar/28.1.235 · External reference
The chemical component dictionary: complete descriptions of constituent molecules in experimentally determined 3D macromolecules in the protein data bank
10.1093/bioinformatics/btu789 · 2015 · External reference
rcsb-api: python toolkit for streamlining access to RCSB protein data bank APIs
10.1016/j.jmb.2025.168970 · 2025 · External reference
10.1093/nar/gkad976
10.1093/nar/gkad976 · External reference
PubChem 2025 update
10.1093/nar/gkae1059 · 2025 · External reference
10.1093/nar/gkad1004
10.1093/nar/gkad1004 · External reference
BindingDB in 2024: a FAIR knowledgebase of protein-small molecule binding data
10.1093/nar/gkae1075 · 2025 · External reference
ClassyFire: automated chemical classification with a comprehensive, computable taxonomy
10.1186/s13321-016-0174-y · 2016 · External reference
10.1021/ci200227u
10.1021/ci200227u · External reference
10.1093/bioinformatics/btp163
10.1093/bioinformatics/btp163 · External reference
10.1038/s41592-022-01685-y
10.1038/s41592-022-01685-y · External reference
10.1126/science.adl2528
10.1126/science.adl2528 · External reference
Chai-1: decoding the molecular interactions of life
2024 · External reference
10.1093/nar/gkac1052
10.1093/nar/gkac1052 · External reference
Unresolved reference
2024 · External reference
10.1155/2017/9351507
10.1155/2017/9351507 · External reference
The Firmicutes/Bacteroidetes ratio: a relevant marker of gut dysbiosis in obese patients?
10.3390/nu12051474 · 2020 · External reference
10.1038/4441022a
10.1038/4441022a · External reference
Antibiotics produced by streptomyces
10.1016/j.bjid.2012.08.014 · 2012 · External reference
In vitro efficacy of extracts and isolated bioactive compounds from ascomycota fungi in the treatment of colorectal cancer: a systematic review
2022 · External reference
10.1371/journal.pcbi.1007569
10.1371/journal.pcbi.1007569 · External reference
10.1016/j.jmb.2020.166788
10.1016/j.jmb.2020.166788 · External reference
10.1042/bcj20220217
10.1042/bcj20220217 · External reference
Pathogenic mutation hotspots in protein kinase domain structure
10.1002/pro.4750 · 2023 · External reference
Macrocyclic lactams as potent Hsp90 inhibitors with excellent tumor exposure and extended biomarker activity
10.1016/j.bmcl.2011.03.112 · 2011 · External reference
2018 American heart Association/American college of cardiology multisociety guideline on the management of blood cholesterol: primary prevention
10.1001/jamacardio.2019.0777 · 2019 · External reference
10.1038/35101544
10.1038/35101544 · External reference
10.1126/scitranslmed.abg7859
10.1126/scitranslmed.abg7859 · External reference
Mapping small molecule binding data to structural domains
10.1186/1471-2105-13-s17-s11 · 2012 · External reference
Molecular basis of Mg(2+) permeation through the human mitochondrial Mrs2 channel
10.1038/s41467-023-40516-2 · 2023 · External reference
Mg(2+) transporters in digestive cancers
10.3390/nu13010210 · 2021 · External reference
10.1038/s41594-024-01432-1
10.1038/s41594-024-01432-1 · External reference
Structural basis of Atg8 activation by a homodimeric E1, Atg7
10.1016/j.molcel.2011.08.035 · 2011 · External reference
Sacrificial Cobalt-Carbon bond homolysis in coenzyme B(12) as a cofactor conservation strategy
10.1021/jacs.8b08659 · 2018 · External reference
10.1038/s41586-018-0680-3
10.1038/s41586-018-0680-3 · External reference
A dimeric catalytic core relates the short and long forms of ATP-phosphoribosyltransferase
10.1042/bcj20170762 · 2018 · External reference
