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References from Generation of 12 major-terms for interpretating human cellular processes. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1038/75556
10.1038/75556 · External reference
10.1093/bib/bbr002
10.1093/bib/bbr002 · External reference
The gene ontology knowledgebase in 2023
2023 · External reference
Graph-based exploitation of gene ontology using GOxploreR for scrutinizing biological significance
10.1038/s41598-020-73326-3 · 2020 · External reference
GoMiner: a resource for biological interpretation of genomic and proteomic data
10.1186/gb-2003-4-4-r28 · 2003 · External reference
BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks
10.1093/bioinformatics/bti551 · 2005 · External reference
GOLEM: an interactive graph-based gene-ontology navigation and analysis tool
10.1186/1471-2105-7-443 · 2006 · External reference
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
10.1186/1471-2105-10-48 · 2009 · External reference
NaviGO: interactive tool for visualization and functional similarity and coherence analysis with gene ontology
10.1186/s12859-017-1600-5 · 2017 · External reference
10.1093/nar/gki475
10.1093/nar/gki475 · External reference
WebGestalt 2017: a more comprehensive, powerful, flexible and interactive gene set enrichment analysis toolkit
10.1093/nar/gkx356 · 2017 · External reference
GOnet: a tool for interactive Gene Ontology analysis
10.1186/s12859-018-2533-3 · 2018 · External reference
Using GOstats to test gene lists for GO term association
2007 · External reference
RedundancyMiner: De-replication of redundant GO categories in microarray and proteomics analysis
10.1186/1471-2105-12-52 · 2011 · External reference
10.1371/journal.pone.0021800
10.1371/journal.pone.0021800 · External reference
10.1371/journal.pone.0013984
10.1371/journal.pone.0013984 · External reference
ClueGO: a cytoscape plug-in to decipher functionally grouped gene ontology and pathway annotation networks
2009 · External reference
Improved detection of overrepresentation of Gene-Ontology annotations with parent child analysis
2007 · External reference
GOToolBox: functional analysis of gene datasets based on gene ontology
10.1186/gb-2004-5-12-r101 · 2004 · External reference
The STRING database in 2023: protein-protein association networks and functional enrichment analyses for any sequenced genome of interest
10.1093/nar/gkac1000 · 2023 · External reference
AnimalTFDB 4.0: a comprehensive animal transcription factor database updated with variation and expression annotations
2023 · External reference
A subcellular map of the human kinome
10.7554/elife.64943 · 2021 · External reference
10.1038/nature11412
10.1038/nature11412 · External reference
10.1038/nature13385
10.1038/nature13385 · External reference
10.1038/nature11252
10.1038/nature11252 · External reference
10.1056/nejmoa1301689
10.1056/nejmoa1301689 · External reference
10.1038/nature12634
10.1038/nature12634 · External reference
AmiGO: online access to ontology and annotation data
2009 · External reference
10.1101/gr.1239303
10.1101/gr.1239303 · External reference
Data structures for statistical computing in python
10.25080/majora-92bf1922-00a · 2010 · External reference
Gephi: an open source software for exploring and manipulating networks
2009 · External reference
Genenames.org: the HGNC resources in 2023
2023 · External reference