References

Starch accumulation, activities of key enzyme and gene expression in starch synthesis of wheat endosperm with different starch contents

10.1007/s13197-011-0520-z · 2014 · External reference

Rice starch diversity: effects on structural, morphological, thermal, and physicochemical properties—A review

10.1111/j.1541-4337.2012.00193.x · 2012 · External reference

Effects of timing and severity of salinity stress on rice (Oryza sativa L.) yield, grain composition, and starch functionality

10.1021/jf503948p · 2015 · External reference

Differences in starch structure, thermal properties, and texture characteristics of rice from main stem and tiller panicles

10.1016/j.foodhyd.2019.105341 · 2020 · External reference

Factors affecting sensory quality of cooked japonica rice

10.1016/j.rsci.2018.10.003 · 2018 · External reference

Classification of rice cultivars by using chemical, physicochemical, thermal, hydration properties, and cooking quality

2019 · External reference

Physicochemical and rheological properties of flour and starch from Thai pigmented rice cultivars

10.1016/j.ijbiomac.2019.06.196 · 2019 · External reference

Effect of rice storage proteins on the physicochemical properties of indica rice during after-ripening

10.1016/j.ijbiomac.2024.138289 · 2025 · External reference

Starch chemical composition and molecular structure in relation to physicochemical characteristics and resistant starch content of four Thai commercial rice cultivars differing in pasting properties

10.3390/polym15030574 · 2023 · External reference

10.1111/j.1365-313x.2005.02348.x

10.1111/j.1365-313x.2005.02348.x · External reference

Gene expression of the biosynthetic enzymes and biosynthesis of starch during rice grain development

10.1007/bf03030587 · 2005 · External reference

Starch biosynthesis in cereal endosperm

10.1016/j.plaphy.2010.03.006 · 2010 · External reference

Physicochemical properties of starches and expression and activity of starch biosynthesis-related genes in sweet potatoes

10.1016/j.foodchem.2015.12.053 · 2016 · External reference

Towards a better understanding of the metabolic system for amylopectin biosynthesis in plants: rice endosperm as a model tissue

10.1093/pcp/pcf091 · 2002 · External reference

How amylose molecular fine structure of rice starch affects functional properties

10.1016/j.carbpol.2018.09.078 · 2019 · External reference

Starch accumulation, activities of key enzyme and gene expression in starch synthesis of wheat endosperm with different starch contents

10.1007/s13197-011-0520-z · 2014 · External reference

Resistant starch could be decisive in determining the glycemic index of rice cultivars

10.1016/j.jcs.2017.11.013 · 2018 · External reference

Conventional plant breeding principles and techniques

10.1007/978-3-319-22521-0_5 · 2015 · External reference

SSIIIa-RNAi suppression associated changes in rice grain quality and starch biosynthesis metabolism in response to high temperature

10.1016/j.plantsci.2020.110443 · 2020 · External reference

10.1093/jxb/ert187

10.1093/jxb/ert187 · External reference

10.1111/nph.17990

10.1111/nph.17990 · External reference

Starch biosynthesis in cereal endosperms: an updated review over the last decade

10.1016/j.xplc.2021.100237 · 2021 · External reference

Regulatory loops between rice transcription factors OsNAC25 and OsNAC20/26 balance starch synthesis

10.1093/plphys/kiae139 · 2024 · External reference

Genotype-dependent and heat-induced grain chalkiness in rice correlates with the expression patterns of starch biosynthesis genes

2020 · External reference

Yield, grain quality, and starch physicochemical properties of 2 elite Thai rice cultivars grown under varying production systems and soil characteristics

10.3390/foods10112601 · 2021 · External reference

Effect of high temperature on the expressions of genes encoding starch synthesis enzymes in developing rice endosperms

10.1016/s2095-3119(14)60782-6 · 2015 · External reference

10.1002/jsfa.11367

10.1002/jsfa.11367 · External reference

Granule morphological and structural variability of Thai certified glutinous rice starches in relation to thermal, pasting, and digestible properties

10.1002/cche.10389 · 2021 · External reference

A universal method for high-quality RNA extraction from plant tissues rich in starch, proteins and fiber

10.1038/s41598-020-73958-5 · 2020 · External reference

10.12688/f1000research.15931.1

10.12688/f1000research.15931.1 · External reference

MultiQC: summarize analysis results for multiple tools and samples in a single report

10.1093/bioinformatics/btw354 · 2016 · External reference

fastp: an ultra-fast all-in-one FASTQ preprocessor

10.1093/bioinformatics/bty560 · 2018 · External reference

Trimmomatic: a flexible trimmer for Illumina sequence data

10.1093/bioinformatics/btu170 · 2014 · External reference

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

10.1093/bioinformatics/bts611 · 2012 · External reference

An RNA family database

2005 · External reference

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

10.1093/nar/gks1219 · 2012 · External reference

A draft sequence of the rice genome (Oryza sativa L. ssp. indica)

10.1126/science.1068037 · 2002 · External reference

10.1038/nmeth.3317

10.1038/nmeth.3317 · External reference

10.1038/nprot.2012.016

10.1038/nprot.2012.016 · External reference

Automated eukaryotic gene structure annotation using EVidenceModeler and the Program to Assemble Spliced Alignments

2008 · External reference

BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs

10.1093/bioinformatics/btv351 · 2015 · External reference

Evolution and expression analysis of starch synthase III and IV in rice

10.1093/jxb/eri065 · 2005 · External reference

A comprehensive expression analysis of the starch synthase gene family in rice (Oryza sativa L.)

10.1007/s00425-004-1314-6 · 2004 · External reference

10.1007/s11103-007-9153-z

10.1007/s11103-007-9153-z · External reference

10.1016/s0022-2836(05)80360-2

10.1016/s0022-2836(05)80360-2 · External reference

10.1093/molbev/msab293

10.1093/molbev/msab293 · External reference

Data processing solutions to render metabolomics more quantitative: case studies in food and clinical metabolomics using Metabox 2.0

10.1093/gigascience/giae005 · 2024 · External reference

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

10.1093/bioinformatics/btp616 · 2010 · External reference

STEM: a tool for the analysis of short time series gene expression data

10.1186/1471-2105-7-191 · 2006 · External reference

10.1101/gr.1239303

10.1101/gr.1239303 · External reference

Construction of light-responsive gene regulatory network for growth, development and secondary metabolite production in Cordyceps militaris

10.3390/biology11010071 · 2022 · External reference

Regulatory sequence analysis tools

10.1093/nar/gkg567 · 2003 · External reference

10.1016/j.cell.2014.08.009

10.1016/j.cell.2014.08.009 · External reference

Accurate structure prediction of biomolecular interactions with AlphaFold 3

10.1038/s41586-024-07487-w · 2024 · External reference

Plant bZIP G-box binding factors. Modular structure and activation mechanisms

10.1046/j.0014-2956.2001.02552.x · 2001 · External reference

HADDOCK: a protein− protein docking approach based on biochemical or biophysical information

10.1021/ja026939x · 2003 · External reference

Organ specificity of isoforms of starch branching enzyme (Q-enzyme) in rice

1992 · External reference

Diverse activities and biochemical properties of amylase and proteases from six freshwater fish species

10.1038/s41598-021-85258-7 · 2021 · External reference

Biochemical and genetic analysis of the effects of amylose-extender mutation in rice endosperm

10.1104/pp.010127 · 2001 · External reference

Extraction and assays of ADP-glucose pyrophosphorylase, soluble starch synthase and granule bound starch synthase from wheat (Triticum aestivum L.) grains

2016 · External reference

10.1111/j.1365-313x.2006.02731.x

10.1111/j.1365-313x.2006.02731.x · External reference

Double DAP-seq uncovered synergistic DNA binding of interacting bZIP transcription factors

10.1038/s41467-023-38096-2 · 2023 · External reference

The rice bZIP transcriptional activator RITA-1 is highly expressed during seed development

1994 · External reference

10.1104/pp.107.112821

10.1104/pp.107.112821 · External reference

10.1074/jbc.m007405200

10.1074/jbc.m007405200 · External reference

CRISPR/Cas9 mutations in the rice Waxy/GBSSI gene induce allele-specific and zygosity-dependent feedback effects on endosperm starch biosynthesis

10.1007/s00299-019-02388-z · 2019 · External reference

Different isoforms of starch-synthesizing enzymes controlling amylose and amylopectin content in rice (Oryza sativa L.)

10.1016/j.biotechadv.2012.08.011 · 2012 · External reference

10.1073/pnas.1804774115

10.1073/pnas.1804774115 · External reference

Genome-wide identification and characterization of ABA receptor PYL gene family in rice

10.1186/s12864-020-07083-y · 2020 · External reference

Sucrose and ABA regulate starch biosynthesis in maize through a novel transcription factor, ZmEREB156

10.1038/srep27590 · 2016 · External reference

Rice starch biotechnology: Rice endosperm as a model of cereal endosperms

10.1002/star.201600375 · 2018 · External reference

Transcriptomics analysis of hulless barley during grain development with a focus on starch biosynthesis

10.1007/s10142-016-0537-5 · 2017 · External reference

Critical and speculative review of the roles of multi-protein complexes in starch biosynthesis in cereals

10.1016/j.plantsci.2017.05.007 · 2017 · External reference

Starch-branching enzyme I-deficient mutation specifically affects the structure and properties of starch in rice endosperm

10.1104/pp.103.021527 · 2003 · External reference

Resistant starch formation and changes in physicochemical properties of waxy and non-waxy rice starches by autoclaving-cooling treatment

10.1080/10942912.2024.2332357 · 2024 · External reference

10.1002/star.201500027

10.1002/star.201500027 · External reference

Geometrical formation of compound starch grains in rice implements Voronoi diagram

2015 · External reference

Unresolved reference

1999 · External reference

OPAQUE3, encoding a transmembrane bZIP transcription factor, regulates endosperm storage protein and starch biosynthesis in rice

2022 · External reference

10.1104/pp.108.125633

10.1104/pp.108.125633 · External reference

10.1111/tpj.13970

10.1111/tpj.13970 · External reference

10.3390/agronomy7040081

10.3390/agronomy7040081 · External reference

Pho1a (plastid starch phosphorylase) is duplicated and essential for normal starch granule phenotype in tubers of Solanum tuberosum L

10.3389/fpls.2023.1220973 · 2023 · External reference

10.3390/life14010161

10.3390/life14010161 · External reference

A sucrose non-fermenting-1-related protein kinase 1 gene from wheat, TaSnRK1α regulates starch biosynthesis by modulating AGPase activity

10.1016/j.plaphy.2024.108407 · 2024 · External reference

Unresolved reference

External reference

Posttranslational modification of waxy to genetically improve starch quality in rice grain

10.3390/ijms22094845 · 2021 · External reference

Competition between granule bound starch synthase and starch branching enzyme in starch biosynthesis

2019 · External reference

10.1016/j.cj.2023.03.015

10.1016/j.cj.2023.03.015 · External reference

RNA-binding protein RBP-P is required for glutelin and prolamine mRNA localization in rice endosperm cells

10.1105/tpc.18.00321 · 2018 · External reference

The role of RNA-binding protein Os Tudor-SN in post-transcriptional regulation of seed storage proteins and endosperm development

10.1093/pcp/pcz113 · 2019 · External reference

Unique glutelin expression patterns and seed endosperm structure facilitate glutelin accumulation in polyploid rice seed

2021 · External reference

10.1016/s0031-9422(97)00319-1

10.1016/s0031-9422(97)00319-1 · External reference

10.1111/pbi.12025

10.1111/pbi.12025 · External reference

Improving the content of essential amino acids in crop plants: goals and opportunities

10.1104/pp.108.118091 · 2008 · External reference

10.1093/jexbot/53.370.947

10.1093/jexbot/53.370.947 · External reference

The molecular basis of cereal grain proteostasis

10.1042/ebc20210041 · 2022 · External reference

10.1104/pp.103.024703

10.1104/pp.103.024703 · External reference

10.1038/s41598-017-17756-6

10.1038/s41598-017-17756-6 · External reference

Functional characterization of wheat histone H2B monoubiquitination enzyme TaHUB2 in response to vernalization in Keumkang (Triticum aestivum L

2021 · External reference

10.1111/nph.19706

10.1111/nph.19706 · External reference

Lack of globulin synthesis during seed development alters accumulation of seed storage proteins in rice

10.3390/ijms160714717 · 2015 · External reference

Unresolved reference

2012 · External reference

Dynamic change in starch biosynthetic enzymes complexes during grain-filling stages in BEIIb active and deficient rice

10.3390/ijms231810714 · 2022 · External reference

Exploring the synergy of enzymes, nutrients, and gene networks in rice starch granule biogenesis

10.3389/fnut.2024.1448450 · 2024 · External reference

Deficiencies in both starch synthase IIIa and branching enzyme IIb lead to a significant increase in amylose in SSIIa-inactive japonica rice seeds

10.1093/jxb/eru310 · 2014 · External reference

Dynamics of starch formation and gene expression during grain filling and its possible influence on grain quality

10.1038/s41598-024-57010-4 · 2024 · External reference

Pregelatinized glutinous rice starch as a sustained release agent for tablet preparations

10.1016/j.carbpol.2009.12.006 · 2010 · External reference