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References from Predictive accuracy of the DEB model: forecasting Escherichia coli growth and its uncertainty following substrate shifts. Local targets link to admitted publications; unresolved targets remain external evidence.
Sustainable bioprocess technologies for urban waste valorization
10.1016/j.cscee.2021.100166 · 2021 · External reference
Emergent lag phase in flux-regulation models of bacterial growth
10.1007/s11538-023-01189-6 · 2023 · External reference
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A quantitative approach to catabolite repression in Escherichia coli
10.1074/jbc.m508090200 · 2006 · External reference
Making predictive modelling ART: accurate, reliable, and transparent
10.1002/ecs2.3160 · 2020 · External reference
Practical identifiability analysis of large environmental simulation models
10.1029/2000wr900350 · 2001 · External reference
Fundamental Escherichia coli biochemical pathways for biomass and energy production: identification of reactions
10.1002/bit.10812 · 2004 · External reference
Rewiring of glycerol metabolism in Escherichia coli for effective production of recombinant proteins
10.1186/s13068-020-01848-z · 2020 · External reference
A strategy to improve production of recombinant proteins in Escherichia coli based on a glucose–glycerol mixture and glutamate
10.1021/acs.jafc.0c03671 · 2020 · External reference
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Understanding and harnessing the microaerobic metabolism of glycerol in Escherichia coli
10.1002/bit.22246 · 2009 · External reference
A dynamic energy budget (DEB) model to describe population dynamics of the marine cyanobacterium prochlorococcus marinus
10.1016/j.ecolmodel.2017.06.011 · 2017 · External reference
Digital models in biotechnology: towards multi-scale integration and implementation
10.1016/j.biotechadv.2022.108015 · 2022 · External reference
Bioprocessing of waste for renewable chemicals and fuels to promote bioeconomy
10.3390/en16093873 · 2023 · External reference
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The standard dynamic energy budget model has no plausible alternatives
10.1016/j.ecolmodel.2020.109106 · 2020 · External reference
A DEB-based approach of modeling dissolved organic matter release by phytoplankton
10.1016/j.seares.2018.07.016 · 2019 · External reference
Stylized facts in microalgal growth: interpretation in a dynamic energy budget context
10.1098/rstb.2010.0101 · 2010 · External reference
Bioprocess systems analysis, modeling, estimation, and control
10.1016/j.coche.2021.100705 · 2021 · External reference
Hybrid modeling in bioprocess dynamics: structural variabilities, implementation strategies, and practical challenges
10.1002/bit.28503 · 2023 · External reference
The AmP project: comparing species on the basis of dynamic energy budget parameters
10.1371/journal.pcbi.1006100 · 2018 · External reference
Sublethal effects of binary mixtures of Cu2+ and Cd2+ on Daphnia magna: Standard Dynamic Energy Budget (DEB) model analysis
10.1016/j.envpol.2023.122142 · 2023 · External reference
Standard dynamic energy budget model parameter sensitivity
10.1016/j.ecolmodel.2023.110304 · 2023 · External reference
Reducing parameter uncertainty in kinetic models: a new strategy for experimental design
10.1016/j.ecolmodel.2025.111424 · 2026 · External reference
Dynamic Energy Budget model for E. coli growth in carbon and nitrogen limitation conditions
10.1007/s00253-024-13245-9 · 2024 · External reference
The role of artificial intelligence-driven soft sensors in advanced sustainable process industries: a critical review
10.1016/j.engappai.2023.105988 · 2023 · External reference
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Effective production of n -butanol in Escherichia coli utilizing the glucose–glycerol mixture
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Towards a digital bioprocess replica: computational approaches in biopharmaceutical development and manufacturing
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Recent advances on the microbiological and enzymatic processing for conversion of food wastes to valuable bioproducts
10.1016/j.cofs.2020.11.002 · 2021 · External reference
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On the duration of the microbial lag phase
10.1007/s00294-019-00938-2 · 2019 · External reference
Synergetic fermentation of glucose and glycerol for high-yield N-acetylglucosamine production in Escherichia coli
10.3390/ijms23020773 · 2022 · External reference
Unresolved reference
2020 · External reference
Fundamental Escherichia coli biochemical pathways for biomass and energy production: identification of reactions
10.1002/bit.10812 · ExternalCitation · doi-reference
Understanding and harnessing the microaerobic metabolism of glycerol in Escherichia coli
10.1002/bit.22246 · ExternalCitation · doi-reference
Hybrid modeling in bioprocess dynamics: structural variabilities, implementation strategies, and practical challenges
10.1002/bit.28503 · ExternalCitation · doi-reference
Making predictive modelling ART: accurate, reliable, and transparent
10.1002/ecs2.3160 · ExternalCitation · doi-reference
Dynamic Energy Budget model for E. coli growth in carbon and nitrogen limitation conditions
10.1007/s00253-024-13245-9 · ExternalCitation · doi-reference
On the duration of the microbial lag phase
10.1007/s00294-019-00938-2 · ExternalCitation · doi-reference
Emergent lag phase in flux-regulation models of bacterial growth
10.1007/s11538-023-01189-6 · ExternalCitation · doi-reference
Digital models in biotechnology: towards multi-scale integration and implementation
10.1016/j.biotechadv.2022.108015 · ExternalCitation · doi-reference
Bioprocess systems analysis, modeling, estimation, and control
10.1016/j.coche.2021.100705 · ExternalCitation · doi-reference
Recent advances on the microbiological and enzymatic processing for conversion of food wastes to valuable bioproducts
10.1016/j.cofs.2020.11.002 · ExternalCitation · doi-reference
Sustainable bioprocess technologies for urban waste valorization
10.1016/j.cscee.2021.100166 · ExternalCitation · doi-reference
A dynamic energy budget (DEB) model to describe population dynamics of the marine cyanobacterium prochlorococcus marinus
10.1016/j.ecolmodel.2017.06.011 · ExternalCitation · doi-reference
The standard dynamic energy budget model has no plausible alternatives
10.1016/j.ecolmodel.2020.109106 · ExternalCitation · doi-reference
Standard dynamic energy budget model parameter sensitivity
10.1016/j.ecolmodel.2023.110304 · ExternalCitation · doi-reference
Reducing parameter uncertainty in kinetic models: a new strategy for experimental design
10.1016/j.ecolmodel.2025.111424 · ExternalCitation · doi-reference
The role of artificial intelligence-driven soft sensors in advanced sustainable process industries: a critical review
10.1016/j.engappai.2023.105988 · ExternalCitation · doi-reference
Sublethal effects of binary mixtures of Cu2+ and Cd2+ on Daphnia magna: Standard Dynamic Energy Budget (DEB) model analysis
10.1016/j.envpol.2023.122142 · ExternalCitation · doi-reference
Effective production of n -butanol in Escherichia coli utilizing the glucose–glycerol mixture
10.1016/j.jtice.2017.09.039 · ExternalCitation · doi-reference
A DEB-based approach of modeling dissolved organic matter release by phytoplankton
10.1016/j.seares.2018.07.016 · ExternalCitation · doi-reference
Towards a digital bioprocess replica: computational approaches in biopharmaceutical development and manufacturing
10.1016/j.tibtech.2020.05.008 · ExternalCitation · doi-reference
A strategy to improve production of recombinant proteins in Escherichia coli based on a glucose–glycerol mixture and glutamate
10.1021/acs.jafc.0c03671 · ExternalCitation · doi-reference
Practical identifiability analysis of large environmental simulation models
10.1029/2000wr900350 · ExternalCitation · doi-reference
A quantitative approach to catabolite repression in Escherichia coli
10.1074/jbc.m508090200 · ExternalCitation · doi-reference
Stylized facts in microalgal growth: interpretation in a dynamic energy budget context
10.1098/rstb.2010.0101 · ExternalCitation · doi-reference
Rewiring of glycerol metabolism in Escherichia coli for effective production of recombinant proteins
10.1186/s13068-020-01848-z · ExternalCitation · doi-reference
The AmP project: comparing species on the basis of dynamic energy budget parameters
10.1371/journal.pcbi.1006100 · ExternalCitation · doi-reference
Bioprocessing of waste for renewable chemicals and fuels to promote bioeconomy
10.3390/en16093873 · ExternalCitation · doi-reference
Synergetic fermentation of glucose and glycerol for high-yield N-acetylglucosamine production in Escherichia coli
10.3390/ijms23020773 · ExternalCitation · doi-reference
