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References from Vision and retina evolution: How to develop a retina. Local targets link to admitted publications; unresolved targets remain external evidence.
DNA methylation in amphioxus: from ancestral functions to new roles in vertebrates
10.1093/bfgp/els009 · 2012 · External reference
Centrifugal fibers are the only GABAergic structures of the retina of the larval sea lamprey: an immunocytochemical study
10.1016/s0006-8993(97)01330-9 · 1998 · External reference
The origin and evolution of cell types
10.1038/nrg.2016.127 · 2016 · External reference
Understanding the retinal basis of vision across species.
10.1038/s41583-019-0242-1 · 2020 · External reference
All in the family: proneural bHLH genes and neuronal diversity
2018 · External reference
Fine structure of the photoreceptor and cerebral ganglion of the tadpole larva of Amaroucium constellatum (Verrill)(Subphylum: Urochordata; Class: Ascidiacea).
10.1007/bf00331097 · 1971 · External reference
Organization of alpha‐transducin immunoreactive system in the brain and retina of larval and young adult Sea Lamprey (Petromyzon marinus), and their relationship with other neural systems.
10.1002/cne.24296 · 2017 · External reference
Phylogenetic analysis of phenotypic characters of Tunicata supports basal Appendicularia and monophyletic Ascidiacea
10.1111/cla.12405 · 2020 · External reference
Structure and ultrastructure of eyes and brains of Thalia democratica (Thaliacea, Tunicata, Chordata)
10.1002/jmor.20722 · 2017 · External reference
Morphology and evolution of the central nervous system in adult tunicates
10.1111/jzs.12246 · 2019 · External reference
Photoreceptor cell fate specification in vertebrates
10.1242/dev.127043 · 2015 · External reference
Retina development in vertebrates: systems biology approaches to understanding genetic programs: on the contribution of next‐generation sequencing methods to the characterization of the regulatory networks controlling vertebrate eye development
10.1002/bies.201900187 · 2020 · External reference
Comprehensive single-cell transcriptome lineages of a proto-vertebrate
10.1038/s41586-019-1385-y · 2019 · External reference
Early stages of zebrafish eye formation require the coordinated activity of Wnt11, Fz5, and the Wnt/β-catenin pathway
10.1016/j.neuron.2005.05.026 · 2005 · External reference
Cell fate determination in the vertebrate retina
10.1073/pnas.93.2.589 · 1996 · External reference
Cell type-and stage-specific expression of Otx2 is regulated by multiple transcription factors and cis-regulatory modules in the retina
2020 · External reference
Diversification and molecular evolution of ATOH8, a gene encoding a bHLH transcription factor
2011 · External reference
The evolution of early vertebrate photoreceptors
10.1098/rstb.2009.0099 · 2009 · External reference
Observations on the shape of the lens in the eye of the silver lamprey, Ichthyomyzon unicuspis.
10.1139/z93-006 · 1993 · External reference
Single cell sequencing of the pineal gland: the next chapter
10.3389/fendo.2019.00590 · 2019 · External reference
Genetics and development of neural tube defects
10.1002/path.2643 · 2010 · External reference
Retinoic acid influences neuronal migration from the ganglionic eminence to the cerebral cortex
10.1111/j.1471-4159.2011.07471.x · 2011 · External reference
Ganglion cells and retinopetal fibers of the larval lamprey retina: an HRP ultrastructural study
10.1016/0304-3940(89)90192-4 · 1989 · External reference
The pineal and reproduction in fish, amphibians, and reptiles
2020 · External reference
Light-transduction in melanopsin-expressing photoreceptors of Amphioxus
10.1073/pnas.0900708106 · 2009 · External reference
bHLH transcription factors in neural development, disease, and reprogramming
10.1016/j.brainres.2018.03.013 · 2019 · External reference
Identification of neural progenitor cells and their progeny reveals long distance migration in the developing octopus brain
10.7554/elife.69161 · 2021 · External reference
Atoh8 in development and disease
10.3390/biology11010136 · 2022 · External reference
Vertebrate features revealed in the rudimentary eye of the Pacific hagfish (Eptatretus stoutii)
2021 · External reference
Early ear neuronal development, but not olfactory or lens development, can proceed without SOX2
10.1016/j.ydbio.2019.09.003 · 2020 · External reference
Unresolved reference
1973 · External reference
Ultrastructure of sensory receptors in ascidian tadpoles.
10.1007/bf02584045 · 1970 · External reference
Rab23 is an essential negative regulator of the mouse Sonic hedgehog signalling pathway
10.1038/35084089 · 2001 · External reference
Development in the mammalian auditory system depends on transcription factors
10.3390/ijms22084189 · 2021 · External reference
An integrated perspective of communalities and difference across sensory receptors and their distinct central input
2022 · External reference
Lamprey vision: photoreceptors and organization of the retina
2019 · External reference
Lamprey vision: photoreceptors and organization of the retina
10.1016/j.semcdb.2019.10.008 · 2020 · External reference
Transitional chordates and vertebrate origins: Tunicates
10.1016/bs.ctdb.2020.10.001 · 2021 · External reference
Ontogenetic clues to the phylogeny of the visual system
1991 · External reference
An integrated perspective of evolution and development: from genes to function to ear, lateral line and electroreception
10.3390/d13080364 · 2021 · External reference
Dendritic distribution of two populations of ganglion cells and the retinopetal fibers in the retina of the silver lamprey (Ichthyomyzon unicuspis)
10.1017/s0952523800005745 · 1990 · External reference
The role of bHLH genes in ear development and evolution: revisiting a 10-year-old hypothesis
10.1007/s00018-010-0403-x · 2010 · External reference
Gene, cell, and organ multiplication drives inner ear evolution
10.1016/j.ydbio.2017.08.034 · 2017 · External reference
10.1016/b0-12-370878-8/00125-7
10.1016/b0-12-370878-8/00125-7 · External reference
Evolving gene regulatory networks into cellular networks guiding adaptive behavior: an outline how single cells could have evolved into a centralized neurosensory system
10.1007/s00441-014-2043-1 · 2015 · External reference
Ancestry of photic and mechanic sensation?
10.1126/science.308.5725.1113 · 2005 · External reference
Organization of the six motor nuclei innervating the ocular muscles in lamprey
10.1002/cne.902940402 · 1990 · External reference
Eye morphogenesis and patterning of the optic vesicle
10.1016/b978-0-12-385044-7.00003-5 · 2010 · External reference
Reporter analyses reveal redundant enhancers that confer robustness on cis-regulatory mechanisms
2018 · External reference
In vivo neuroregeneration to treat ischemic stroke through NeuroD1 AAV-based gene therapy in adult non-human primates
10.3389/fcell.2020.590008 · 2020 · External reference
Wilhelm His’ lasting insights into hindbrain and cranial ganglia development and evolution
10.1016/j.ydbio.2018.02.001 · 2018 · External reference
Open brain, a new mouse mutant with severe neural tube defects, shows altered gene expression patterns in the developing spinal cord
10.1242/dev.120.11.3119 · 1994 · External reference
Open brain gene product Rab23: expression pattern in the adult mouse brain and functional characterization
10.1002/jnr.20788 · 2006 · External reference
Early evolution of multifocal optics for well-focused colour vision in vertebrates
10.1242/jeb.016048 · 2008 · External reference
Inner ear development in cyclostomes and evolution of the vertebrate semicircular canals
10.1038/s41586-018-0782-y · 2019 · External reference
Invertebrate origins of vertebrate nervous systems
2020 · External reference
The amphioxus genome illuminates vertebrate origins and cephalochordate biology
10.1101/gr.073676.107 · 2008 · External reference
A new look at an old question: when did the second whole genome duplication occur in vertebrate evolution?
10.1186/s13059-018-1592-0 · 2018 · External reference
The invertebrate chordate amphioxus gives clues to vertebrate origins
10.1016/bs.ctdb.2021.12.011 · 2022 · External reference
The hagfish retina: electron microscopic study comparing receptor and epithelial cells in the Pacific hagfish, Polistotrema stouti, with those in the Atlantic hagfish, Myxine glutinosa
10.1007/bf00340676 · 1971 · External reference
The cyclostome retina
1977 · External reference
Pigmented and nonpigmented ocelli in the brain vesicle of the ascidian larva
10.1002/cne.21733 · 2008 · External reference
bHLH-dependent and-independent modes of Ath5 gene regulation during retinal development
10.1242/dev.01653 · 2005 · External reference
Selective projection patterns from subtypes of retinal ganglion cells to tectum and pretectum: distribution and relation to behavior
10.1002/cne.22154 · 2009 · External reference
Beta-arrestin functionally regulates the non-bleaching pigment parapinopsin in lamprey pineal
10.1371/journal.pone.0016402 · 2011 · External reference
Effects of Neurod1 expression on mouse and human schwannoma cells
10.1002/lary.28671 · 2021 · External reference
Melatonin attenuates RANKL-induced osteoclastogenesis via inhibition of Atp6v0d2 and DC-STAMP through MAPK and NFATc1 signaling pathways
2022 · External reference
Distribution and structural diversity of cilia in tadpole larvae of the ascidian Ciona intestinalis
10.1016/j.ydbio.2009.10.012 · 2010 · External reference
Parallel visual circuitry in a basal chordate
10.7554/elife.44753 · 2019 · External reference
Bistable UV pigment in the lamprey pineal.
10.1073/pnas.0400819101 · 2004 · External reference
Cephalochordate melanopsin: evolutionary linkage between invertebrate visual cells and vertebrate photosensitive retinal ganglion cells
10.1016/j.cub.2005.04.063 · 2005 · External reference
Ci-opsin1, a vertebrate-type opsin gene, expressed in the larval ocellus of the ascidian Ciona intestinalis.
10.1016/s0014-5793(01)02877-0 · 2001 · External reference
Amphioxus, motion detection, and the evolutionary origin of the vertebrate retinotectal map.
10.1186/s13227-018-0093-2 · 2018 · External reference
The developing dorsal ganglion of the salp Thalia democratica, and the nature of the ancestral chordate brain
10.1098/rstb.1998.0347 · 1998 · External reference
Landmarks in the anterior central nervous system of amphioxus larvae
10.1098/rstb.1994.0059 · 1994 · External reference
Evolution of phototransduction, vertebrate photoreceptors and retina
10.1016/j.preteyeres.2013.06.001 · 2013 · External reference
Evolution of the vertebrate eye: opsins, photoreceptors, retina and eye cup
10.1038/nrn2283 · 2007 · External reference
Foxg specifies sensory neurons in the anterior neural plate border of the ascidian embryo
2019 · External reference
The genetic program to specify ectodermal cells in ascidian embryos
10.1111/dgd.12660 · 2020 · External reference
The eyes of hagfishes
1998 · External reference
Can we see with melanopsin?
2020 · External reference
Hindbrain neuropore tissue geometry determines asymmetric cell-mediated closure dynamics in mouse embryos
10.1073/pnas.2023163118 · 2021 · External reference
The eye in the brain: retinoic acid effects morphogenesis of the eye and pathway selection of axons but not the differentiation of the retina in Xenopus laevis.
10.1016/0304-3940(91)90782-o · 1991 · External reference
Vision and retina information processing: from opsins to the visual cortex
2022 · External reference
Early development of the retina and pineal complex in the sea lamprey: comparative immunocytochemical study
10.1002/cne.10090 · 2002 · External reference
A Paleozoic stem hagfish Myxinikela siroka—revised anatomy and implications for evolution of the living jawless vertebrate lineages
10.1139/cjz-2020-0046 · 2020 · External reference
Transcriptional regulation of cranial sensory placode development
10.1016/bs.ctdb.2014.11.009 · 2015 · External reference
Light adaptation and the evolution of vertebrate photoreceptors
10.1113/jp274211 · 2017 · External reference
Pupillary light reflex of lamprey Petromyzon marinus
10.1016/j.cub.2020.11.021 · 2021 · External reference
The development of the human brain, the closure of the caudal neuropore, and the beginning of secondary neurulation at stage 12
10.1007/bf00310083 · 1987 · External reference
NeuroD1: developmental expression and regulated genes in the rodent pineal gland.
10.1111/j.1471-4159.2007.04605.x · 2007 · External reference
Helix–loop–helix proteins and the advent of cellular diversity: 30 years of discovery
10.1101/gad.320663.118 · 2019 · External reference
Ascidian arrestin (Ci‐arr), the origin of the visual and nonvisual arrestins of vertebrate
10.1046/j.1432-1033.2002.03240.x · 2002 · External reference
Transcription factors of the bHLH family delineate vertebrate landmarks in the nervous system of a simple chordate
10.3390/genes11111262 · 2020 · External reference
The genetics of cone opsin based vision disorders
2021 · External reference
Eye evolution in animals.
2021 · External reference
NeuroD1 is required for survival of photoreceptors but not pinealocytes: results from targeted gene deletion studies
10.1111/j.1471-4159.2012.07870.x · 2012 · External reference
The history of scientific endeavors towards understanding hagfish embryology
10.2108/zsj.23.403 · 2006 · External reference
The role of transposable elements in functional evolution of amphioxus genome: the case of opsin gene family
10.1038/s41598-018-20683-9 · 2018 · External reference
The opsin repertoire of the European lancelet: a window into light detection in a basal chordate.
10.1387/ijdb.170139zk · 2017 · External reference
Computational studies towards the identification of novel rhodopsin-binding compounds as chemical chaperones for misfolded opsins
10.3390/molecules25214904 · 2020 · External reference
Amphioxus photoreceptors-insights into the evolution of vertebrate opsins, vision and circadian rhythmicity
10.1387/ijdb.170230zk · 2017 · External reference
Sensory neuroscience: a taste for light and the origin of animal vision
10.1016/j.cub.2020.05.009 · 2020 · External reference
Origin and evolution of retinoid isomerization machinery in vertebrate visual cycle: hint from jawless vertebrates
10.1371/journal.pone.0049975 · 2012 · External reference
Development and functional organization of the cranial nerves in lampreys
10.1002/ar.23821 · 2019 · External reference
Anatomical and physiological characteristics of pineal photoreceptor cell in the larval lamprey, Petromyzon marinus
10.1152/jn.1981.46.5.1018 · 1981 · External reference
Central projections of the pineal complex in the silver lamprey Ichthyomyzon unicuspis
10.1007/bf00224108 · 1989 · External reference
The transcription factor Atonal homolog 8 regulates Gata4 and Friend of Gata-2 during vertebrate development
10.1074/jbc.m113.463083 · 2013 · External reference
The pineal and its hormones in the control of reproduction in mammals
10.1210/edrv-1-2-109 · 1980 · External reference
Developmental anatomy of lampreys
10.1111/j.1469-185x.2009.00092.x · 2010 · External reference
The zebrafish eye—a paradigm for investigating human ocular genetics
10.1038/eye.2016.198 · 2017 · External reference
Pineal eye and behaviour in Xenopus tadpoles
10.1038/273774a0 · 1978 · External reference
Novel mouse model of encephalocele: post-neurulation origin and relationship to open neural tube defects.
2019 · External reference
The peripheral nervous system of the ascidian tadpole larva: types of neurons and their synaptic networks
10.1002/cne.24353 · 2018 · External reference
Axes establishment during eye morphogenesis in Xenopus by coordinate and antagonistic actions of BMP4, Shh, and RA
10.1002/gene.10095 · 2002 · External reference
Insights from a sea lamprey into the evolution of neural crest gene regulatory network
10.2307/25470671 · 2008 · External reference
Unresolved reference
2021 · External reference
The evolution of eyes: major steps. The Keeler lecture 2017: centenary of Keeler Ltd
10.1038/eye.2017.226 · 2018 · External reference
Caspases and matrix metalloproteases facilitate collective behavior of non-neural ectoderm after hindbrain neuropore closure.
10.1186/s12861-018-0175-3 · 2018 · External reference
Origin and diversification of the basic helix-loop-helix gene family in metazoans: insights from comparative genomics.
10.1186/1471-2148-7-33 · 2007 · External reference
Generation of the melatonin endocrine message in mammals: a review of the complex regulation of melatonin synthesis by norepinephrine, peptides, and other pineal transmitters
10.1124/pr.55.2.2 · 2003 · External reference
Sequencing of the sea lamprey (Petromyzon marinus) genome provides insights into vertebrate evolution
10.1038/ng.2568 · 2013 · External reference
The only known jawed vertebrate with four eyes and the bauplan of the pineal complex
2018 · External reference
Molecular phylogeny and classification of the family Myxinidae (Cyclostomata: Myxiniformes) using the supermatrix method
10.1016/j.japb.2020.09.006 · 2020 · External reference
Migratory neuronal progenitors arise from the neural plate borders in tunicates
10.1038/nature15758 · 2015 · External reference
Genetic mechanism for the cyclostome cerebellar neurons reveals early evolution of the vertebrate cerebellum
10.3389/fcell.2021.700860 · 2021 · External reference
The stepwise development of the lamprey visual system and its evolutionary implications
10.1111/brv.12403 · 2018 · External reference
Targeted deletion of Atoh8 results in severe hearing loss in mice
10.1002/dvg.23442 · 2021 · External reference
Transcriptional regulation of the peripheral nervous system in Ciona intestinalis
10.1016/j.ydbio.2013.03.016 · 2013 · External reference
The opsins
10.1186/gb-2005-6-3-213 · 2005 · External reference
Quantitative and in toto imaging in ascidians: working toward an image‐centric systems biology of chordate morphogenesis
10.1002/dvg.22828 · 2015 · External reference
The ascidian mouth opening is derived from the anterior neuropore: reassessing the mouth/neural tube relationship in chordate evolution
10.1016/j.ydbio.2010.04.028 · 2010 · External reference
Opsin-immunoreactive outer segments in the pineal and parapineal organs of the lamprey (Lampetra fluviatilis), the eel (Anguilla anguilla), and the rainbow trout (Salmo gairdneri)
10.1007/bf00213806 · 1983 · External reference
Calbindin and calretinin immunoreactivity in the retina of adult and larval sea lamprey
10.1016/j.brainres.2005.11.014 · 2006 · External reference
Molecular analysis of the amphioxus frontal eye unravels the evolutionary origin of the retina and pigment cells of the vertebrate eye
10.1073/pnas.1207580109 · 2012 · External reference
Visual opsin expression and morphological characterization of retinal photoreceptors in the pouched lamprey (Geotria australis, Gray).
10.1002/cne.25092 · 2021 · External reference
The brains of lampreys and hagfishes: characteristics, characters, and comparisons.
10.1159/000113204 · 1996 · External reference
Early steps in the development of the forebrain
10.1016/s1534-5807(04)00027-9 · 2004 · External reference
Tunicate gastrulation
10.1016/bs.ctdb.2019.09.001 · 2020 · External reference
Single cell transcriptomics reveals lineage trajectory of retinal ganglion cells in wild-type and Atoh7-null retinas
2021 · External reference
The Lhx9 homeobox gene controls pineal gland development and prevents postnatal hydrocephalus
10.1007/s00429-014-0740-x · 2015 · External reference
Dynamic transcriptome analysis reveals potential long non-coding RNAs governing postnatal pineal development in pig
10.3389/fgene.2019.00409 · 2019 · External reference
Eya2 expression during mouse embryonic development revealed by Eya2(lacZ) knockin reporter and homozygous mice show mild hearing loss
10.1002/dvdy.326 · 2021 · External reference
Comparison of differentiation gene batteries for migratory mechanosensory neurons across bilaterians
10.1111/ede.12331 · 2020 · External reference
Regulatory mechanisms of retinal photoreceptors development at single cell resolution
10.3390/ijms22168357 · 2021 · External reference
