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References from Regulation of DbaM modifies the disulfide bond formation system in Escherichia coli. Local targets link to admitted publications; unresolved targets remain external evidence.
Stress-responsively modulated ymdAB-clsC operon plays a role in biofilm formation and apramycin susceptibility in Escherichia coli
10.1093/femsle/fnx114 · 2017 · External reference
CsrA-mediated translational activation of ymdA expression in Escherichia coli
10.1128/mbio.00849-20 · 2020 · External reference
Protein folding in the cell envelope of Escherichia coli
10.1038/nmicrobiol.2016.107 · 2016 · External reference
Complete set of ORF clones of Escherichia coli ASKA library (a complete set of E. Coli K-12 ORF archive): unique resources for biological research
10.1093/dnares/dsi012 · 2005 · External reference
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
10.1038/msb4100050 · 2006 · External reference
Systematic analysis of the role of bacterial Hfq-interacting sRNAs in the response to antibiotics
10.1093/jac/dkv042 · 2015 · External reference
YmdB: a stress-responsive ribonuclease-binding regulator of E. Coli RNase III activity
10.1101/gad.1729508 · 2008 · External reference
SignalP 6.0 predicts all five types of signal peptides using protein language models
10.1038/s41587-021-01156-3 · 2022 · External reference
UniProt: the universal protein knowledgebase in 2023
10.1093/nar/gkac1052 · 2023 · External reference
Jalview Version 2--a multiple sequence alignment editor and analysis workbench
10.1093/bioinformatics/btp033 · 2009 · External reference
PEPPI: whole-proteome protein-protein interaction prediction through structure and sequence similarity, functional association, and machine learning
10.1016/j.jmb.2022.167530 · 2022 · External reference
Accurate structure prediction of biomolecular interactions with AlphaFold 3
10.1038/s41586-024-07487-w · 2024 · External reference
Evaluation of methods for the quantitation of cysteines in proteins
10.1006/abio.1998.2858 · 1998 · External reference
An amplified assay for thiols based on reactivation of papain
10.1006/abio.1993.1384 · 1993 · External reference
The release of enzymes from Escherichia coli by osmotic shock and during the formation of spheroplasts
10.1016/s0021-9258(18)97200-5 · 1965 · External reference
Vaccination with Klebsiella pneumoniae-derived extracellular vesicles protects against bacteria-induced lethality via both humoral and cellular immunity
10.1038/emm.2015.59 · 2015 · External reference
Extracellular vesicle sizing and enumeration by nanoparticle tracking analysis
10.3402/jev.v2i0.19671 · 2013 · External reference
Significant increase in the secretion of extracellular vesicles and antibiotics resistance from methicillin-resistant Staphylococcus aureus induced by ampicillin stress
10.1038/s41598-020-78121-8 · 2020 · External reference
The EcoCyc database (2025)
10.1128/ecosalplus.esp-0019-2024 · 2025 · External reference
A comprehensive review of signal peptides: structure, roles, and applications
10.1016/j.ejcb.2018.06.003 · 2018 · External reference
Disulfide bond formation in prokaryotes
10.1038/s41564-017-0106-2 · 2018 · External reference
Disulfide bond formation in the periplasm of Escherichia coli
10.1128/ecosalplus.esp-0012-2018 · 2019 · External reference
SHuffle, a novel Escherichia coli protein expression strain capable of correctly folding disulfide bonded proteins in its cytoplasm
10.1186/1475-2859-11-56 · 2012 · External reference
Envelope-stress sensing mechanism of Rcs and Cpx signaling pathways in gram-negative Bacteria
10.1007/s12275-023-00030-y · 2023 · External reference
The role of disulfide bond isomerase a (DsbA) of Escherichia coli O157:H7 in biofilm formation and virulence
10.1111/j.1574-6968.2007.00993.x · 2008 · External reference
Modulation of biofilm-formation in salmonella enterica serovar typhimurium by the periplasmic DsbA/DsbB oxidoreductase system requires the GGDEF-EAL domain protein STM3615
10.1371/journal.pone.0106095 · 2014 · External reference
Quorum sensing in Pseudomonas aeruginosa controls expression of catalase and superoxide dismutase genes and mediates biofilm susceptibility to hydrogen peroxide
10.1046/j.1365-2958.1999.01672.x · 1999 · External reference
Global gene expression in Staphylococcus aureus biofilms
10.1128/jb.186.14.4665-4684.2004 · 2004 · External reference
Differential gene expression profiling of Staphylococcus aureus cultivated under biofilm and planktonic conditions
10.1128/aem.71.5.2663-2676.2005 · 2005 · External reference
Bacterial biofilms: a common cause of persistent infections
10.1126/science.284.5418.1318 · 1999 · External reference
Structure and mechanisms of the DsbB-DsbA disulfide bond generation machine
10.1016/j.bbamcr.2007.11.006 · 2008 · External reference
Prediction of protein assemblies, the next frontier: the CASP14-CAPRI experiment
10.1002/prot.26222 · 2021 · External reference
Protein disulfide bond formation in prokaryotes
10.1146/annurev.biochem.72.121801.161459 · 2003 · External reference
Disulfide bond formation in the bacterial periplasm: major achievements and challenges ahead
10.1089/ars.2012.4864 · 2013 · External reference
Fundamentals of protein interaction network mapping
10.15252/msb.20156351 · 2015 · External reference
Transient protein-protein interactions: structural, functional, and network properties
10.1016/j.str.2010.08.007 · 2010 · External reference
DsbA and DsbC-catalyzed oxidative folding of proteins with complex disulfide bridge patterns in vitro and in vivo
10.1016/s0022-2836(02)01248-2 · 2003 · External reference
Differential bacterial surface display of peptides by the transmembrane domain of OmpA
10.1371/journal.pone.0006739 · 2009 · External reference
A rapid protein folding assay for the bacterial periplasm
10.1002/pro.388 · 2010 · External reference
Molecular insights into RmcA-mediated c-di-GMP consumption: linking redox potential to biofilm morphogenesis in Pseudomonas aeruginosa
10.1016/j.micres.2023.127498 · 2023 · External reference
Redox-based regulation of bacterial development and behavior
10.1146/annurev-biochem-061516-044453 · 2017 · External reference
Effect of changes in the redox status on biofilm formation in Escherichia coli
10.1007/s10517-023-05727-z · 2023 · External reference
Paradoxical redox properties of DsbB and DsbA in the protein disulfide-introducing reaction cascade
10.1093/emboj/21.11.2646 · 2002 · External reference
Redox properties of protein disulfide isomerase (DsbA) from Escherichia coli
10.1002/pro.5560020503 · 1993 · External reference
Structure and function of DsbA, a key bacterial oxidative folding catalyst
10.1089/ars.2010.3344 · 2011 · External reference
Bacterial protein disulfide isomerase: efficient catalysis of oxidative protein folding at acidic pH
10.1021/bi00096a039 · 1993 · External reference
Capturing of extracellular vesicles derived from single cells of Escherichia coli
10.1039/d3lc00707c · 2024 · External reference
Extracellular vesicle production and membrane uptake promote repair and antibiotic tolerance in E. coli
2025 · External reference
Dual role for DsbA in attacking and targeted bacterial cells during type VI secretion system-mediated competition
10.1016/j.celrep.2017.12.075 · 2018 · External reference
Synthetic effect between envelope stress and lack of outer membrane vesicle production in Escherichia coli
10.1128/jb.02192-12 · 2013 · External reference
Identification of a protein required for disulfide bond formation in vivo
10.1016/0092-8674(91)90532-4 · 1991 · External reference
Catalysis of disulfide bond formation and isomerization in the Escherichia coli periplasm
10.1016/j.bbamcr.2004.02.012 · 2004 · External reference
Oxidative protein folding is driven by the electron transport system
10.1016/s0092-8674(00)81016-8 · 1999 · External reference
Outer-membrane vesicles from gram-negative bacteria: biogenesis and functions
10.1038/nrmicro3525 · 2015 · External reference
Vesicle-mediated export and assembly of pore-forming oligomers of the enterobacterial ClyA cytotoxin
10.1016/s0092-8674(03)00754-2 · 2003 · External reference