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References from Quantitative and genomic epidemiology of Staphylococcus aureus in retail foods: insights into foodborne risk and clinically relevant lineages. Local targets link to admitted publications; unresolved targets remain external evidence.
Molecular characterization of Staphylococcus aureus isolated from human and food samples in northern Algeria
10.3390/pathogens10101276 · 2021 · External reference
Prevalence and genetic characteristics of Staphylococcus aureus and Staphylococcus argenteus isolates harboring Panton-Valentine leukocidin, enterotoxins, and TSST-1 genes from food handlers in Myanmar
10.3390/toxins9080241 · 2017 · External reference
ResFinder 4.0 for predictions of phenotypes from genotypes
10.1093/jac/dkaa345 · 2020 · External reference
Food safety in home kitchens: a synthesis of the literature
10.3390/ijerph10094060 · 2013 · External reference
Waves of resistance: Staphylococcus aureus in the antibiotic era
10.1038/nrmicro2200 · 2009 · External reference
Livestock-associated methicillin-resistant Staphylococcus aureus in Asia: an emerging issue?
10.1016/j.ijantimicag.2014.12.007 · 2015 · External reference
Unresolved reference
2017 · External reference
Food-borne outbreak investigation and molecular typing: high diversity of Staphylococcus aureus strains and importance of toxin detection
10.3390/toxins9120407 · 2017 · External reference
The European Union one health 2024 zoonoses report
2025 · External reference
Clinical and molecular characteristics of methicillin-resistant Staphylococcus aureus in bone and joint infection among children
2023 · External reference
Genomic surveillance reveals distinct clonal lineages and antibiotic resistance patterns in Staphylococcus aureus from retail pork in Beijing versus Copenhagen
10.3390/microbiolres17020034 · 2026 · External reference
Occurrence and characteristics of toxigenic Staphylococcus aureus in retail foods in Iran
10.1089/fpd.2023.0122 · 2024 · External reference
Genome-wide comparative analysis of CC1 Staphylococcus aureus between colonization and infection
10.1186/s40001-024-02076-z · 2024 · External reference
Population structure and characterisation of Staphylococcus aureus from bacteraemia at multiple hospitals in China: association between antibiotic resistance, toxin genes and genotypes
10.1016/j.ijantimicag.2013.04.031 · 2013 · External reference
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
10.1093/nar/gkw1004 · 2017 · External reference
Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli
10.1128/jcm.03617-13 · 2014 · External reference
The emerging threat of methicillin-resistant Staphylococcus aureus (MRSA) clone ST22-PT, carrying both Panton-Valentine leucocidin and toxic shock syndrome toxin 1 genes
10.1093/jac/dkad039 · 2023 · External reference
Host-pathogen interactions between the skin and Staphylococcus aureus
10.1016/j.mib.2011.11.003 · 2012 · External reference
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
10.1093/nar/gkab301 · 2021 · External reference
VFDB 2022: a general classification scheme for bacterial virulence factors
10.1093/nar/gkab1107 · 2022 · External reference
Multidrug-resistant, extensively drug-resistant and pandrug-resistant bacteria: an international expert proposal for interimstandard definitions for acquired resistance
10.1111/j.1469-0691.2011.03570.x · 2012 · External reference
Unresolved reference
2021 · External reference
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies
10.1093/molbev/msu300 · 2015 · External reference
Production of staphylococcal enterotoxin D in foods by low-enterotoxin-producing staphylococci
10.1016/0168-1605(91)90033-l · 1991 · External reference
Genetic characterization of Staphylococcus aureus isolated from retail meat in Riyadh, Saudi Arabia
10.3389/fmicb.2016.00911 · 2016 · External reference
Foods confiscated from non-EU flights as a neglected route of potential methicillin-resistant Staphylococcus aureus transmission
10.1016/j.ijfoodmicro.2014.08.016 · 2015 · External reference
Foodborne illness acquired in the United States--major pathogens
10.3201/eid1701.p11101 · 2011 · External reference
Investigating a rare methicillin-resistant Staphylococcus aureus strain: first description of genome sequencing and molecular characterization of CC15-MRSA
10.2147/idr.s145394 · 2017 · External reference
Molecular epidemiology and geographical variation of methicillin-resistant Staphylococcus aureus: a multicentre study across Xinjiang, China
10.1186/s12866-025-04502-6 · 2025 · External reference
Unresolved reference
2016 · External reference
Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: implications for the microbial “pan-genome”
10.1073/pnas.0506758102 · 2005 · External reference
Producing polished prokaryotic pangenomes with the Panaroo pipeline
10.1186/s13059-020-02090-4 · 2020 · External reference
Emergence of methicillin-resistant Staphylococcus aureus belonging to clonal complex 15 (CC15-MRSA) in Kuwait hospitals
10.2147/idr.s237319 · 2020 · External reference
Evolutionary and mobile genetic element analysis of a multidrug-resistant ST398-MRSA-Vc isolate from ready-to-eat pork products
10.3390/antibiotics15030314 · 2026 · External reference
Antibiotic susceptibility and molecular typing of methicillin-resistant Staphylococcus aureus in retail foods in Shaanxi, China
10.1089/fpd.2013.1643 · 2014 · External reference
Enterotoxigenicity and antibiotic resistance of Staphylococcus aureus isolated from retail food in China
10.3389/fmicb.2017.02256 · 2017 · External reference
Accurate detection of recombinant breakpoints in whole-genome alignments
10.1371/journal.pcbi.1000318 · 2009 · External reference
Prevalence and characterization of food-related methicillin-resistant Staphylococcus aureus (MRSA) in China
2019 · External reference
Evolutionary dynamics of the novel ST22-PT methicillin-resistant Staphylococcus aureus clone co-harbouring Panton–Valentine leucocidin and duplicated toxic shock syndrome toxin 1 genes
10.1016/j.cmi.2024.02.020 · 2024 · External reference
Prevalence and characterization of Staphylococcus aureus and methicillin-resistant Staphylococcus aureus isolated from retail yak butter in Tibet, China
10.3168/jds.2020-19604 · 2021 · External reference