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References from Risk assessment of antibiotic-resistant bacteria in global lakes and their hotspots. Local targets link to admitted publications; unresolved targets remain external evidence.
Antimicrobial resistance: a concise update
10.1016/j.lanmic.2024.07.010 · 2025 · External reference
Call of the wild: antibiotic resistance genes in natural environments
10.1038/nrmicro2312 · 2010 · External reference
Antibiotic resistance in the environment
10.1038/s41579-021-00649-x · 2022 · External reference
Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis
10.1016/s0140-6736(21)02724-0 · 2022 · External reference
Tackling drug-resistant infections globally: final report and
2016 · External reference
The One Health resistome: Integrating environmental, microbial, and human antimicrobial resistance surveillance and risk analysis in the digital age
10.1016/j.jhazmat.2026.142431 · 2026 · External reference
Integrated surveillance systems for antibiotic resistance in a One Health context: a scoping review
10.1186/s12889-024-19158-6 · 2024 · External reference
Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment
10.1038/s41591-020-0894-4 · 2020 · External reference
Antibiotic use and its consequences for the normal microbiome
10.1126/science.aad9358 · 2016 · External reference
Comprehensive Evaluation of Antibiotics Emission and Fate in the River Basins of China: Source Analysis, Multimedia Modeling, and Linkage to Bacterial Resistance
10.1021/acs.est.5b00729 · 2015 · External reference
Global diversity, coexistence and consequences of resistome in inland waters
10.1016/j.watres.2024.121253 · 2024 · External reference
Global biogeography and projection of soil antibiotic resistance genes
10.1126/sciadv.abq8015 · 2022 · External reference
A global atlas of marine antibiotic resistance genes and their expression
10.1016/j.watres.2023.120488 · 2023 · External reference
A global metagenomic map of urban microbiomes and antimicrobial resistance
10.1016/j.cell.2021.05.002 · 2021 · External reference
Insight into environmental adaptability of antibiotic resistome from surface water to deep sediments in anthropogenic lakes by metagenomics
10.1016/j.watres.2024.121583 · 2024 · External reference
Accumulation of Clinically Relevant Antibiotic-Resistance Genes, Bacterial Load, and Metals in Freshwater Lake Sediments in Central Europe
10.1021/acs.est.5b01031 · 2015 · External reference
Antibiotics and antibiotic resistance genes in global lakes: A review and meta-analysis
10.1016/j.envint.2018.04.011 · 2018 · External reference
Understanding human health risks caused by antibiotic resistant bacteria (ARB) and antibiotic resistance genes (ARG) in water environments: Current knowledge and questions to be answered
10.1080/10643389.2019.1692611 · 2020 · External reference
Antibiotic resistance genes are transferred from manure-contaminated water bodies to the gut microbiota of animals through the food chain
10.1016/j.envpol.2024.125087 · 2024 · External reference
Data-driven discoveries on widespread contamination of freshwater reservoirs by dominant antibiotic resistance genes
10.1016/j.watres.2022.119466 · 2023 · External reference
Environmental risk characterization and ecological process determination of bacterial antibiotic resistome in lake sediments
10.1016/j.envint.2020.106345 · 2021 · External reference
Assessment of global health risk of antibiotic resistance genes
10.1038/s41467-022-29283-8 · 2022 · External reference
Inter-plasmid transfer of antibiotic resistance genes accelerates antibiotic resistance in bacterial pathogens
10.1093/ismejo/wrad032 · 2024 · External reference
High-risk plasmid-borne resistance genes from swine farm environments infiltrate deep soil and interact with the human gut microbiome via horizontal transfer
10.1016/j.jhazmat.2025.139281 · 2025 · External reference
Global marine microbial diversity and its potential in bioprospecting
10.1038/s41586-024-07891-2 · 2024 · External reference
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database
10.1093/nar/gkw1004 · 2017 · External reference
Global health risks lurking in livestock resistome
10.1126/sciadv.adt8073 · 2025 · External reference
PlasFlow: predicting plasmid sequences in metagenomic data using genome signatures
10.1093/nar/gkx1321 · 2018 · External reference
PlasClass improves plasmid sequence classification
10.1371/journal.pcbi.1007781 · 2020 · External reference
PPR-Meta: a tool for identifying phages and plasmids from metagenomic fragments using deep learning
10.1093/gigascience/giz066 · 2019 · External reference
Accurate plasmid reconstruction from metagenomics data using assembly–alignment graphs and contrastive learning
10.1038/s41587-026-03005-7 · 2026 · External reference
Circling in on plasmids: benchmarking plasmid detection and reconstruction tools for short-read data from diverse species
10.1093/bib/bbaf589 · 2025 · External reference
Ecological dynamics of Enterobacteriaceae in the human gut microbiome across global populations
10.1038/s41564-024-01912-6 · 2025 · External reference
ERA5-Land: a state-of-the-art global reanalysis dataset for land applications
10.5194/essd-13-4349-2021 · 2021 · External reference
Unresolved reference
2018 · External reference
Estimating the volume and age of water stored in global lakes using a geo-statistical approach
10.1038/ncomms13603 · 2016 · External reference
M. Delgado-Baquerizo, Global hotspots for soil nature conservation
10.1038/s41586-022-05292-x · 2022 · External reference
Characterization and source identification of antibiotic resistance genes in the sediments of an interconnected river-lake system
10.1016/j.envint.2020.105538 · 2020 · External reference
Wastewater as a point source of antibiotic-resistance genes in the sediment of a freshwater lake
10.1038/ismej.2014.8 · 2014 · External reference
Integron cassettes integrate into bacterial genomes via widespread non-classical attG sites
10.1038/s41564-023-01548-y · 2024 · External reference
The Role of Integrative and Conjugative Elements in Antibiotic Resistance Evolution
10.1016/j.tim.2020.05.011 · 2021 · External reference
Towards a better understanding of antimicrobial resistance dissemination: what can be learnt from studying model conjugative plasmids?
2022 · External reference
Emergence of plasmid stability under non-selective conditions maintains antibiotic resistance
10.1038/s41467-019-10600-7 · 2019 · External reference
Multicopy plasmids allow bacteria to escape from fitness trade-offs during evolutionary innovation
10.1038/s41559-018-0529-z · 2018 · External reference
Regional antimicrobial resistance gene flow among the One Health sectors in China
10.1186/s40168-024-01983-x · 2025 · External reference
Duplicated antibiotic resistance genes reveal ongoing selection and horizontal gene transfer in bacteria
10.1038/s41467-024-45638-9 · 2024 · External reference
Genomic Epidemiology and Evolution of Escherichia coli in Wild Animals in Mexico
10.1128/msphere.00738-20 · 2021 · External reference
Host adaptation in Salmonella enterica serovar Typhimurium: population structure, pathovariants, and genomic mechanisms
10.1128/aem.02201-25 · 2026 · External reference
Fate of antibiotic resistance genes and their associations with bacterial community in livestock breeding wastewater and its receiving river water
10.1016/j.watres.2017.07.061 · 2017 · External reference
Antibiotic-Resistance Genes in Waste Water
10.1016/j.tim.2017.09.005 · 2018 · External reference
Antibiotic resistance genes from livestock waste: occurrence, dissemination, and treatment
10.1038/s41545-020-0051-0 · 2020 · External reference
Toward a Comprehensive Strategy to Mitigate Dissemination of Environmental Sources of Antibiotic Resistance
10.1021/acs.est.7b03623 · 2017 · External reference
Antimicrobial Resistance in Agriculture
10.1128/mbio.02227-15 · 2016 · External reference
The interplay of environmental and human microbiomes: A review of diversity, functions, and implications for one health
10.59717/j.xinn-life.2026.100208 · 2026 · External reference
Physical, chemical and biological processes in Lake Vostok and other Antarctic subglacial lakes
10.1038/414603a · 2001 · External reference
Residual chlorine disrupts the microbial communities and spreads antibiotic resistance in freshwater
10.1016/j.jhazmat.2021.127152 · 2022 · External reference
Metabolic rearrangement enables adaptation of microbial growth rate to temperature shifts
10.1038/s41564-024-01841-4 · 2025 · External reference
A temperature-induced metabolic shift in the emerging human pathogen Photorhabdus asymbiotica
2024 · External reference
Seasonality modulates wind-driven mixing pathways in a large lake
10.1038/s43247-021-00288-3 · 2021 · External reference
Stratification and mixing in large floodplain lakes along the lower Amazon River
10.1016/j.jglr.2018.11.001 · 2019 · External reference
Response of water temperatures and stratification to changing climate in three lakes with different morphometry
10.5194/hess-21-6253-2017 · 2017 · External reference
Unresolved reference
External reference
Improving biodiversity protection through artificial intelligence
10.1038/s41893-022-00851-6 · 2022 · External reference