Research graph
References from REMIL-IBD: Region-filtered multiple instance learning for interpretable slide-level grading of inflammatory bowel disease. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1093/ecco-jcc/jjac146
10.1093/ecco-jcc/jjac146 · External reference
Diagnostik und therapie von morbus Crohn und colitis ulcerosa
2009 · External reference
Shaping the future of inflammatory bowel disease: a global research agenda for better management and public health response, Nature Reviews
2025 · External reference
10.1177/17562848231218615
10.1177/17562848231218615 · External reference
Epidemiology of inflammatory bowel disease across the ages in the era of advanced therapies
10.1093/ecco-jcc/jjae082 · 2024 · External reference
Extraintestinal manifestations of inflammatory bowel disease
10.1097/mpg.0b013e318093f4b0 · 2008 · External reference
A close view on histopathological changes in inflammatory bowel disease, a narrative review
10.21037/dmr-21-1 · 2021 · External reference
10.3390/jcm11040939
10.3390/jcm11040939 · External reference
Constrained multiple instance learning for ulcerative colitis prediction using histological images
10.1016/j.cmpb.2022.107012 · 2022 · External reference
10.3390/biomedicines11113090
10.3390/biomedicines11113090 · External reference
Ecco position paper: harmonization of the approach to ulcerative colitis histopathology
10.1093/ecco-jcc/jjaa110 · 2020 · External reference
Real-world use of endoscopic and histological indices in ulcerative colitis: results of a global survey
10.1002/ueg2.12423 · 2023 · External reference
Computational pathology definitions, best practices, and recommendations for regulatory guidance: a white paper from the Digital Pathology Association
10.1002/path.5331 · 2019 · External reference
Artificial intelligence enabled automated diagnosis and grading of ulcerative colitis endoscopy images
10.1038/s41598-022-06726-2 · 2022 · External reference
Clinical-grade computational pathology using weakly supervised deep learning on whole slide images
10.1038/s41591-019-0508-1 · 2019 · External reference
Using an anomaly detection approach for the segmentation of colorectal cancer tumors in whole slide images
10.1016/j.jpi.2023.100336 · 2023 · External reference
Weakly supervised deep learning-based detection of serous tubal intraepithelial carcinoma in fallopian tubes
10.1016/j.jpi.2025.100522 · 2025 · External reference
Interpretable survival prediction for colorectal cancer using deep learning
10.1038/s41746-021-00427-2 · 2021 · External reference
Predicting 5-year recurrence risk in colorectal cancer: development and validation of a histology-based deep learning approach
10.1038/s41416-024-02573-2 · 2024 · External reference
Classification of paediatric inflammatory bowel disease using machine learning
10.1038/s41598-017-02606-2 · 2017 · External reference
Early histological findings may predict the clinical phenotype in Crohn's colitis
10.1177/2050640616676435 · 2017 · External reference
Deep learning-based automated quantification of goblet cell mucus using histological images as a predictor of clinical relapse of ulcerative colitis with endoscopic remission
10.1007/s00535-022-01924-1 · 2022 · External reference
Deep learning models capture histological disease activity in Crohn's disease and ulcerative colitis with high fidelity
10.1093/ecco-jcc/jjad171 · 2024 · External reference
Artificial intelligence enables quantitative assessment of ulcerative colitis histology
10.1016/j.modpat.2023.100124 · 2022 · External reference
Are you sure it’s an artifact? Artifact detection and uncertainty quantification in histological images
10.1016/j.compmedimag.2023.102321 · 2024 · External reference
Stain normalization gives greater generalizability than stain jittering in neural network training for the classification of coeliac disease in duodenal biopsy whole slide images
10.1016/j.jpi.2023.100324 · 2023 · External reference
A multiscale approach for whole-slide image segmentation of five tissue classes in urothelial carcinoma slides
2020 · External reference
Self-contrastive weakly supervised learning framework for prognostic prediction using whole slide images
10.1371/journal.pdig.0000972 · 2025 · External reference
Artificial intelligence enabled histological prediction of remission or activity and clinical outcomes in ulcerative colitis
10.1053/j.gastro.2023.02.031 · 2023 · External reference
The development of artificial intelligence in the histological diagnosis of inflammatory bowel disease (IBD-AI)
10.1016/j.dld.2024.05.033 · 2025 · External reference
CoNIC Challenge: Pushing the frontiers of nuclear detection, segmentation, classification and counting
10.1016/j.media.2023.103047 · 2024 · External reference
IBDome: an integrated molecular, histopathological, and clinical atlas of inflammatory bowel diseases
2025 · External reference
An artificial intelligence-driven scoring system to measure histological disease activity in ulcerative colitis
10.1002/ueg2.12562 · 2024 · External reference
Clinical association between histological activity at diagnosis and endoscopic response in patients with ulcerative colitis: a retrospective study
2025 · External reference
Interrater reliability of the Nancy Histologic Index in assessing histologic remission in treated ulcerative colitis biopsies: a multi-institutional experience among gastrointestinal pathologists in the United States
10.14218/jctp.2025.00022 · 2025 · External reference
A practical guide to assess the Nancy histological index for UC
10.1136/gutjnl-2016-312722 · 2016 · External reference
A comparative evaluation of the measurement properties of three histological indices of mucosal healing in ulcerative colitis: Geboes score, Robarts histopathology index and Nancy index
10.1093/ecco-jcc/jjad087 · 2023 · External reference
H&E image analysis pipeline for quantifying morphological features
10.1016/j.jpi.2023.100339 · 2023 · External reference
One model is all you need: multi-task learning enables simultaneous histology image segmentation and classification
10.1016/j.media.2022.102685 · 2023 · External reference
Benchmarking foundation models as feature extractors for weakly supervised computational pathology
2025 · External reference
Towards a general-purpose foundation model for computational pathology
10.1038/s41591-024-02857-3 · 2024 · External reference
A clinical benchmark of public self-supervised pathology foundation models
10.1038/s41467-025-58796-1 · 2025 · External reference
Development and validation of the Nancy histological index for UC
10.1136/gutjnl-2015-310187 · 2017 · External reference
Reliability and responsiveness of histologic indices for the assessment of Crohn’s disease activity
10.1016/j.cgh.2023.11.032 · 2024 · External reference
Histologic remission is associated with lower risk of treatment failure in patients with Crohn disease in endoscopic remission
10.1093/ibd/izaa301 · 2021 · External reference
Nancy index scores of chronic inflammatory bowel disease activity associate with development of colorectal neoplasia
10.1016/j.cgh.2019.05.002 · 2020 · External reference
Histological indices and risk of recurrence in Crohn's disease: a retrospective study of a cohort of patients in endoscopic remission
10.1093/ibd/izac074 · 2022 · External reference
Prototype-based multiple instance learning for gigapixel whole slide image classification
2026 · External reference
Multiple instance learning: a survey of problem characteristics and applications
10.1016/j.patcog.2017.10.009 · 2018 · External reference
Guided-attention and gated-aggregation network for medical image segmentation
10.1016/j.patcog.2024.110812 · 2024 · External reference
Attention-based deep multiple instance learning
2018 · External reference
Attention is all you need
2017 · External reference
Greedy function approximation: a gradient boosting machine
10.1214/aos/1013203451 · 2001 · External reference
Deep residual learning for image recognition
2016 · External reference
A foundation model for clinical-grade computational pathology and rare cancers detection
10.1038/s41591-024-03141-0 · 2024 · External reference
DINOv2: learning robust visual features without supervision
2024 · External reference
