Research graph
References from Benchmarking sample preservation strategies for clinical single-cell proteomics. Local targets link to admitted publications; unresolved targets remain external evidence.
SCoPE-MS: mass spectrometry of single mammalian cells quantifies proteome heterogeneity during cell differentiation
10.1186/s13059-018-1547-5 · 2018 · External reference
Multiplexed single-cell proteomics using SCoPE2
10.1038/s41596-021-00616-z · 2021 · External reference
Easy and Accessible Workflow for Label-Free Single-Cell Proteomics
10.1021/jasms.3c00240 · 2023 · External reference
Nanodroplet processing platform for deep and quantitative proteome profiling of 10–100 mammalian cells
10.1038/s41467-018-03367-w · 2018 · External reference
Initial recommendations for performing, benchmarking and reporting single-cell proteomics experiments
10.1038/s41592-023-01785-3 · 2023 · External reference
Single-cell Proteomics: Progress and Prospects
10.1074/mcp.r120.002234 · 2020 · External reference
Quantitative single-cell proteomics as a tool to characterize cellular hierarchies
10.1038/s41467-021-23667-y · 2021 · External reference
Single-cell proteomics defines the cellular heterogeneity of localized prostate cancer
2022 · External reference
Single-cell proteomics
10.1038/s41592-018-0273-y · 2019 · External reference
Single cell proteomic analysis defines discrete neutrophil functional states in human glioblastoma
10.1038/s41467-025-67367-3 · 2025 · External reference
Making single-cell proteomics biologically relevant
10.1038/s41592-023-01771-9 · 2023 · External reference
Mapping early human blood cell differentiation using single-cell proteomics and transcriptomics
10.1126/science.adr8785 · 2025 · External reference
Comprehensive peripheral blood immunoprofiling reveals five immunotypes with immunotherapy response characteristics in patients with cancer
10.1016/j.ccell.2024.04.008 · 2024 · External reference
Proteomic analysis of peripheral blood mononuclear cells from OSCC patients reveals potential immune checkpoints to enable personalized treatment
10.1039/d4mo00112e · 2024 · External reference
Human peripheral blood mononuclear cells as a valuable source of disease-related biomarkers: Evidence from comparative proteomics studies
10.1002/prca.202300072 · 2024 · External reference
From HeLa to human blood: extending single-cell proteomics to the smallest immune cells
2025 · External reference
Cell Storage Conditions Impact Single-Cell Proteomic Landscapes
10.1021/acs.jproteome.4c00632 · 2025 · External reference
Formaldehyde Fixation Helps Preserve the Proteome State during Single-Cell Proteomics Sample Processing and Analysis
10.1021/acs.jproteome.4c00656 · 2025 · External reference
High-Throughput Single-Cell Proteomics of In Vivo Cells
10.1016/j.mcpro.2025.101018 · 2025 · External reference
Overcoming Preservation Challenges to Enable Single-Cell Proteomics of Fixed Cells and Tissue Samples with Retained Proteome Integrity
10.1021/acs.jproteome.5c00268 · 2025 · External reference
Formaldehyde Crosslinking: A Tool for the Study of Chromatin Complexes
10.1074/jbc.r115.651679 · 2015 · External reference
Cryopreservation: An Overview of Principles and Cell-Specific Considerations
10.1177/0963689721999617 · 2021 · External reference
Robust and Easy-to-Use One-Pot Workflow for Label-Free Single-Cell Proteomics
10.1021/acs.analchem.2c05022 · 2023 · External reference
Challenging the Astral mass analyzer to quantify up to 5,300 proteins per single cell at unseen accuracy to uncover cellular heterogeneity
10.1038/s41592-024-02559-1 · 2025 · External reference
seaborn: statistical data visualization
10.21105/joss.03021 · 2021 · External reference
InteractiVenn: A web-based tool for the analysis of sets through Venn diagrams
10.1186/s12859-015-0611-3 · 2015 · External reference
SCANPY: Large-scale single-cell gene expression data analysis
10.1186/s13059-017-1382-0 · 2018 · External reference
From Louvain to Leiden: guaranteeing well-connected communities
10.1038/s41598-019-41695-z · 2019 · External reference
g:Profiler—a web-based toolset for functional profiling of gene lists from large-scale experiments
10.1093/nar/gkm226 · 2007 · External reference
g:Profiler: a web server for functional enrichment analysis and conversions of gene lists (2019 update)
10.1093/nar/gkz369 · 2019 · External reference
Gene Set Knowledge Discovery with Enrichr
10.1002/cpz1.90 · 2021 · External reference
DIA-NN: neural networks and interference correction enable deep proteome coverage in high throughput
10.1038/s41592-019-0638-x · 2020 · External reference
Benchmarking commonly used software suites and analysis workflows for DIA proteomics and phosphoproteomics
10.1038/s41467-022-35740-1 · 2023 · External reference
Common Repository of FBS Proteins (cRFP) To Be Added to a Search Database for Mass Spectrometric Analysis of Cell Secretome
10.1021/acs.jproteome.9b00475 · 2019 · External reference
Cyclin-dependent protein kinases and cell cycle regulation in biology and disease
10.1038/s41392-024-02080-z · 2025 · External reference
MCM proteins in DNA replication
10.1146/annurev.biochem.68.1.649 · 1999 · External reference
Multiple Roles of PLK1 in Mitosis and Meiosis
10.3390/cells12010187 · 2023 · External reference
The Aurora B Kinase in Chromosome Bi-Orientation and Spindle Checkpoint Signaling
10.3389/fonc.2015.00225 · 2015 · External reference
Cdc20: At the Crossroads between Chromosome Segregation and Mitotic Exit
10.1016/j.tibs.2016.12.001 · 2017 · External reference
Exploring the function of cell shape and size during mitosis
10.1016/j.devcel.2014.04.009 · 2014 · External reference
Cell Size Contributes to Single-Cell Proteome Variation
10.1021/acs.jproteome.3c00441 · 2023 · External reference
Inflammation switches the chemoattractant requirements for naive lymphocyte entry into lymph nodes
10.1016/j.cell.2024.11.031 · 2025 · External reference
Resolving Immune Lineage and Cell-State Heterogeneity in Human PBMCs via Mass Spectrometry-Based Single-Cell Proteomics
2026 · External reference
Single-cell proteomics reveals cell-type-specific functional coordination in PBMCs
2026 · External reference
Single-cell proteomics maps circulating monocyte dynamics in advanced head and neck squamous cell carcinoma
2026 · External reference
The clinical promise of mass spectrometry based single-cell proteomics: from bedside to bench
10.1080/14789450.2026.2701811 · 2026 · External reference
Limiting the impact of protein leakage in single-cell proteomics
10.1038/s41467-025-56736-7 · 2025 · External reference
Single-Cell Proteomics
10.1016/j.tibs.2021.01.013 · 2021 · External reference
Single-Cell Proteomics of Human Peripheral Blood Mononuclear Cells Exceeding 600 Cells per Day
2026 · External reference
Single-Cell Proteomic Profiling of Human Primary CD8+ T Cells
2025 · External reference
An Ultrasensitive Spatial Tissue Proteomics Workflow Exceeding 100 Proteomes per Day
10.1016/j.mcpro.2025.101489 · 2026 · External reference
Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome
10.1038/s41592-023-02007-6 · 2023 · External reference
Single-cell spatial proteomics maps human liver zonation patterns and their vulnerability to disruption in tissue architecture
10.1038/s42255-026-01459-2 · 2026 · External reference
