Research graph
References from Genomic and pathogenic characterization of Francisella salimarina associated with mortality in fourfinger threadfin (Eleutheronema tetradactylum) in Taiwan. Local targets link to admitted publications; unresolved targets remain external evidence.
List of prokaryotic names with Standing in Nomenclature (LPSN)
10.1093/nar/gkt1111 · 2020 · External reference
Reclassification of Francisella noatunensis subsp. orientalis Ottem et al. 2009 as Francisella orientalis sp. nov., Francisella noatunensis subsp. chilensis subsp. nov. and emended description of Francisella noatunensis
10.1099/ijsem.0.004009 · 2020 · External reference
Francisella salimarina sp. nov., isolated from coastal seawater
10.1099/ijsem.0.004164 · 2020 · External reference
Whole-genome relationships among Francisella bacteria of diverse origins define new species and provide specific regions for detection
10.1128/aem.02589-16 · 2017 · External reference
Francisella marina sp. nov., etiologic agent of systemic disease in cultured spotted rose snapper (Lutjanus guttatus) in Central America
10.1128/aem.00144-18 · 2018 · External reference
Unresolved reference
2004 · External reference
Revision of the Indo-West Pacific polynemid fish genus Eleutheronema (Teleostei: Perciformes)
10.1007/s102280200005 · 2002 · External reference
An emerging pathogen found in farm-cultured fourfinger threadfin (Eleutheronema tetradactylum), Edwardsiella piscicida, its genetic profile, virulent genes, and pathogenicity
10.1016/j.aquaculture.2024.740682 · 2024 · External reference
Pathogenicity and genomic characterization of a novel genospecies, Bacillus shihchuchen, of the Bacillus cereus group isolated from Chinese softshell turtle (Pelodiscus sinensis)
10.3390/ijms24119636 · 2023 · External reference
Analysis of 16S ribosomal DNA sequences of Francisella strains and utilization for determination of the phylogeny of the genus and for identification of strains by PCR
10.1099/00207713-44-1-38 · 1994 · External reference
Transcriptome and pathophysiological analysis during Bacillus cereus group infection in Pelodiscus sinensis uncovered the importance of iron and toll like receptor pathway
10.1016/j.aquaculture.2024.741424 · 2025 · External reference
Fastp: an ultra-fast all-in-one FASTQ preprocessor
10.1093/bioinformatics/bty560 · 2018 · External reference
Porechop_ABI: discovering unknown adapters in Oxford Nanopore Technology sequencing reads for downstream trimming
10.1093/bioadv/vbac085 · 2023 · External reference
Assembly of long, error-prone reads using repeat graphs
10.1038/s41587-019-0072-8 · 2019 · External reference
Fast and accurate de novo genome assembly from long uncorrected reads
10.1101/gr.214270.116 · 2017 · External reference
Pyani: Whole-genome classification using Average Nucleotide Identity
2015 · External reference
PATtyFams: protein families for the microbial genomes in the PATRIC database
10.3389/fmicb.2016.00118 · 2016 · External reference
The PATRIC Bioinformatics resource center: expanding data and analysis capabilities
2019 · External reference
Introducing the bacterial and viral bioinformatics resource center (BV-BRC): a resource combining PATRIC, IRD and ViPR
10.1093/nar/gkac1003 · 2023 · External reference
Improvements to PATRIC, the all-bacterial bioinformatics database and analysis resource center
10.1093/nar/gkw1017 · 2016 · External reference
IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets
10.1093/nar/gkx343 · 2017 · External reference
Prokka: rapid prokaryotic genome annotation
10.1093/bioinformatics/btu153 · 2014 · External reference
MvirDB, a microbial database of protein toxins, virulence factors and antibiotic resistance genes for bio-defence applications
10.1080/15257770701297000 · 2007 · External reference
AMRFinderPlus and the Reference Gene Catalog facilitate examination of the genomic links among antimicrobial resistance, stress response, and virulence
10.1038/s41598-021-91456-0 · 2021 · External reference
Isolation, identification and histopathological observation of Francisella noatunensis subsp. orientalis from Nile tilapia (Oreochromis niloticus)
10.1016/j.aquaculture.2024.741532 · 2025 · External reference
Molecular characterization and pathogenicity of Francisella noatunensis subsp. orientalis isolated from cultured tilapia (Oreochromis sp.) in Taiwan
10.1111/jfd.12964 · 2019 · External reference
Francisella noatunensis subsp. noatunensis is the aetiological agent of visceral granulomatosis in wild Atlantic cod Gadus morhua
10.3354/dao02341 · 2011 · External reference
MazF-induced growth inhibition and persister generation in Escherichia coli
10.1074/jbc.m113.510511 · 2014 · External reference
Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes
10.1093/nar/gki201 · 2005 · External reference
Bacterial toxin-antitoxin systems: more than selfish entities?
10.1371/journal.pgen.1000437 · 2009 · External reference
The mazEF toxin-antitoxin system as a novel antibacterial target in Acinetobacter baumannii
10.1590/0074-0276130601 · 2014 · External reference
The variation of O antigens in gram-negative bacteria
10.1007/978-90-481-9078-2_6 · 2010 · External reference
Structures and mechanisms of glycosyltransferases
10.1093/glycob/cwj016 · 2006 · External reference
Peptidoglycan association of murein lipoprotein is required for KpsD-dependent group 2 capsular polysaccharide expression and serum resistance in a uropathogenic Escherichia coli isolate
10.1128/mbio.00603-17 · 2017 · External reference
Assembly of bacterial capsular polysaccharides and exopolysaccharides
10.1146/annurev-micro-011420-075607 · 2020 · External reference
The Francisella pathogenicity island
10.1196/annals.1409.000 · 2007 · External reference
The biochemical properties of the Francisella pathogenicity island (FPI)-encoded proteins IglA, IglB, IglC, PdpB and DotU suggest roles in type VI secretion
10.1099/mic.0.052308-0 · 2011 · External reference
Disruption of Francisella tularensis Schu S4 iglI, iglJ, and pdpC genes results in attenuation for growth in human macrophages and in vivo virulence in mice and reveals a unique phenotype for pdpC
10.1128/iai.00822-12 · 2013 · External reference
The Francisella tularensis pathogenicity island protein IglC and its regulator MglA are essential for modulating phagosome biogenesis and subsequent bacterial escape into the cytoplasm
10.1111/j.1462-5822.2005.00526.x · 2005 · External reference
Molecular evolutionary consequences of niche restriction in Francisella tularensis, a facultative intracellular pathogen
10.1371/journal.ppat.1000472 · 2009 · External reference
Whole genome sequencing of the fish pathogen Francisella noatunensis subsp. orientalis Toba04 gives novel insights into Francisella evolution and pathogenecity
10.1186/1471-2164-13-598 · 2012 · External reference
Role of Pathogenicity determinant protein C (PdpC) in determining the virulence of the Francisella tularensis subspecies tularensis SCHU
10.1371/journal.pone.0089075 · 2014 · External reference
A Francisella tularensis pathogenicity island required for intramacrophage growth
10.1128/jb.186.19.6430-6436.2004 · 2004 · External reference
The Francisella pathogenicity island protein PdpD is required for full virulence and associates with homologues of the type VI secretion system
10.1128/jb.00198-08 · 2008 · External reference
Variability of chromosomally encoded beta-lactamases from Klebsiella oxytoca
10.1128/aac.41.8.1641 · 1997 · External reference
The active-site-serine penicillin-recognizing enzymes as members of the Streptomyces R61 DD-peptidase family
10.1042/bj2500313 · 1988 · External reference
Role of the conserved amino acids of the 'SDN' loop (Ser130, Asp131 and Asn132) in a class A beta-lactamase studied by site-directed mutagenesis
10.1042/bj2710399 · 1990 · External reference
The Class A β-Lactamase FTU-1 is native to Francisella tularensis
10.1128/aac.05305-11 · 2012 · External reference
Class A carbapenemases
10.1093/jac/dkm226 · 2007 · External reference
Class A carbapenemase FPH-1 from Francisella philomiragia
10.1128/aac.00223-12 · 2012 · External reference
