Research graph
References from Cell geometry and nuclear organization are associated with founder-cell competence for lateral root initiation in the Arabidopsis root. Local targets link to admitted publications; unresolved targets remain external evidence.
Auxin-modulated initiation of lateral roots is linked to pericycle cell length in maize
10.3389/fpls.2019.00011 · 2019 · External reference
Multiple layers of regulators emerge in the network controlling lateral root organogenesis
10.1016/j.tplants.2024.09.018 · 2025 · External reference
The peri-cell-cycle in Arabidopsis
2001 · External reference
Local, efflux-dependent auxin gradients as a common module for plant organ formation
10.1016/s0092-8674(03)00924-3 · 2003 · External reference
Spatiotemporal changes in the role of cytokinin during root development
10.1111/nph.12338 · 2013 · External reference
Spatiotemporal regulation of lateral root organogenesis in Arabidopsis by cytokinin
10.1105/tpc.112.103044 · 2012 · External reference
A tightly regulated auxin signaling landscape is required for spatial accommodation of lateral roots in Arabidopsis
10.1111/ppl.70184 · 2025 · External reference
A novel Aux/IAA28 signaling cascade activates GATA23-dependent specification of lateral root founder cell identity
10.1016/j.cub.2010.09.007 · 2010 · External reference
Auxin-dependent regulation of lateral root positioning in the basal meristem of Arabidopsis
10.1242/dev.02753 · 2007 · External reference
Lateral root initiation or the birth of a new meristem
10.1007/s11103-005-4547-2 · 2006 · External reference
Root nodulation: a paradigm for how plant-microbe symbiosis influences host developmental pathways
10.1016/j.chom.2011.09.005 · 2011 · External reference
Automated 3D bio-imaging analysis of nuclear organization by NucleusJ 2.0
10.1080/19491034.2020.1845012 · 2020 · External reference
Pericycle cell proliferation and lateral root initiation in Arabidopsis
10.1104/pp.124.4.1648 · 2000 · External reference
Lateral root initiation in Arabidopsis: developmental window, spatial patterning, density and predictability
10.1093/aob/mcj604 · 2006 · External reference
Auxin minimum defines a developmental window for lateral root initiation
10.1111/j.1469-8137.2011.03757.x · 2011 · External reference
10.1073/pnas.0712307105
10.1073/pnas.0712307105 · External reference
Parsimonious model of vascular patterning links transverse hormone fluxes to lateral root initiation: auxin leads the way, while cytokinin levels out
10.1371/journal.pcbi.1004450 · 2015 · External reference
XuvTools: free, fast and reliable stitching of large 3D datasets
10.1111/j.1365-2818.2008.03094.x · 2009 · External reference
LBD29 regulates the cell cycle progression in response to auxin during lateral root formation in Arabidopsis thaliana
10.1093/aob/mcs019 · 2012 · External reference
Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT/IAA14 gene of Arabidopsis
10.1046/j.0960-7412.2001.01201.x · 2002 · External reference
PICKLE is required for SOLITARY-ROOT/IAA14-mediated repression of ARF7 and ARF19 activity during Arabidopsis lateral root initiation
10.1111/j.1365-313x.2006.02882.x · 2006 · External reference
Remodeling chromatin to shape the development of plants
10.1016/j.yexcr.2013.11.010 · 2014 · External reference
Multiple AUX/IAA–ARF modules regulate lateral root formation: the role of Arabidopsis SHY2/IAA3-mediated auxin signalling
10.1098/rstb.2011.0232 · 2012 · External reference
Quiescent center initiation in the Arabidopsis lateral root primordia is dependent on the SCARECROW transcription factor
2016 · External reference
Expression dynamics of WOX genes mark cell fate decisions during early embryonic patterning in Arabidopsis thaliana
10.1242/dev.00963 · 2004 · External reference
Auxin-mediated cell cycle activation during early lateral root initiation
10.1105/tpc.004960 · 2002 · External reference
10.1073/pnas.0308702101
10.1073/pnas.0308702101 · External reference
Interplay of auxin and cytokinin in lateral root development
10.3390/ijms20030486 · 2019 · External reference
Lateral root initiation in cucumber (Cucumis sativus): what does the expression pattern of rapid alkalinization factor 34 (RALF34) tell us?
10.3390/ijms24098440 · 2023 · External reference
Cytokinins act directly on lateral root founder cells to inhibit root initiation
10.1105/tpc.107.055863 · 2007 · External reference
Natural variation in plant pluripotency and regeneration
10.3390/plants9101261 · 2020 · External reference
Lateral root development in Arabidopsis: fifty shades of auxin
10.1016/j.tplants.2013.04.006 · 2013 · External reference
Lateral organ boundaries domain16 and 18 act downstream of the AUXIN1 and LIKE-AUXIN3 auxin influx carriers to control lateral root development in Arabidopsis
10.1104/pp.15.00578 · 2015 · External reference
Cytokinins as phytohormones—sites of biosynthesis, translocation, and function of translocated cytokinin
2019 · External reference
10.1073/pnas.1210807110
10.1073/pnas.1210807110 · External reference
Organization and cell differentiation in lateral roots of Arabidopsis thaliana
10.1242/dev.124.1.33 · 1997 · External reference
The emerging role of reactive oxygen species signaling during lateral root development
10.1104/pp.114.238873 · 2014 · External reference
Mechanisms and flexibility in plant asymmetric cell division
10.1016/j.pbi.2026.102896 · 2026 · External reference
Oscillating gene expression determines competence for periodic Arabidopsis root branching
10.1126/science.1191937 · 2010 · External reference
Pickle recruits retinoblastoma related 1 to control lateral root formation in Arabidopsis
10.3390/ijms22083862 · 2021 · External reference
Diarch symmetry of the vascular bundle in Arabidopsis root encompasses the pericycle and is reflected in distich lateral root initiation
10.1104/pp.107.107870 · 2008 · External reference
Protocol: an improved and universal procedure for whole-mount immunolocalization in plants
10.1186/s13007-015-0094-2 · 2015 · External reference
Deep-resolution plant phenotyping platform description
2021 · External reference
Methods of in situ quantitative root biology
2021 · External reference
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence
10.1038/msb.2013.43 · 2013 · External reference
Shaping the root system architecture in plants for adaptation to drought stress
10.1111/ppl.13651 · 2022 · External reference
PHYTOCHROME AND FLOWERING TIME1/MEDIATOR25 regulates lateral root formation via auxin signaling in Arabidopsis
10.1104/pp.114.239806 · 2014 · External reference
Environmental control of root system biology
10.1146/annurev-arplant-043015-111848 · 2016 · External reference
Beyond the barrier: communication in the root through the endodermis
10.1104/pp.114.244871 · 2014 · External reference
An auxin-dependent distal organizer of pattern and polarity in the Arabidopsis root
10.1016/s0092-8674(00)81535-4 · 1999 · External reference
Canalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity
10.1101/gad.390806 · 2006 · External reference
The iRoCS Toolbox—3D analysis of the plant root apical meristem at cellular resolution
10.1111/tpj.12429 · 2014 · External reference
High-resolution whole-mount imaging of three-dimensional tissue organization and gene expression enables the study of phloem development and structure in Arabidopsis
10.1105/tpc.107.056069 · 2008 · External reference
The synthesis, transport and metabolism of endogenous cytokinins
10.1111/j.1365-3040.1979.tb00780.x · 1979 · External reference
Lateral root initiation and the analysis of gene function using genome editing with CRISPR in Arabidopsis
10.3390/genes12060884 · 2021 · External reference
Cell cycle progression in the pericycle is not sufficient for SOLITARY ROOT/IAA14-mediated lateral root initiation in Arabidopsis thaliana
10.1105/tpc.105.035493 · 2005 · External reference
Auxin regulation of cell cycle and its role during lateral root initiation
10.1111/j.1399-3054.2005.00466.x · 2005 · External reference
Lateral root initiation in Arabidopsis thaliana: a force awakens
2015 · External reference
Genes and networks regulating root anatomy and architecture
10.1111/nph.13469 · 2015 · External reference
Hormonal regulation of cell fate plasticity of xylem-pole-pericycle lineage in Arabidopsis roots
10.1016/j.molp.2025.09.006 · 2025 · External reference
Developmental transitions: integrating environmental cues with hormonal signaling in the chromatin landscape in plants
10.1186/s13059-017-1228-9 · 2017 · External reference
The dynamic nature and regulation of the root clock
10.1242/dev.181446 · 2020 · External reference
Auxin transporters—why so many?
10.1101/cshperspect.a001552 · 2010 · External reference
A gain-of-function mutation in OsIAA11 affects lateral root development in rice
10.1093/mp/ssr074 · 2012 · External reference
