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References from Comammox Nitrospira adapt to oxygen availability informing strategies for low oxygen nitrification. Local targets link to admitted publications; unresolved targets remain external evidence.
Source identification of nitrous oxide emission pathways from a single-stage nitritation-anammox granular reactor
10.1016/j.watres.2016.06.034 · 2016 · External reference
Enhancing nitrogen removal efficiency and reducing nitrate liquor recirculation ratio by improving simultaneous nitrification and denitrification in integrated fixed-film activated sludge (IFAS) process
10.2166/wst.2015.558 · 2016 · External reference
Effects of dissolved oxygen and diffusion resistances on nitrification kinetics
10.1016/0043-1354(92)90146-u · 1992 · External reference
Ecological aspects of the distribution of different autotrophic CO2 fixation pathways
10.1128/aem.02473-10 · 2011 · External reference
Cytochrome bd oxidase from Escherichia coli displays high catalase activity: an additional defense against oxidative stress
10.1016/j.febslet.2013.05.047 · 2013 · External reference
The cytochrome bd respiratory oxygen reductases
10.1016/j.bbabio.2011.06.016 · 2011 · External reference
Aerobic respiratory chain of Escherichia coli is not allowed to work in fully uncoupled mode
10.1073/pnas.1108217108 · 2011 · External reference
Genome-enabled insights into the ecophysiology of the comammox bacterium “Candidatus Nitrospira nitrosa.”
10.1128/msystems.00059-17 · 2017 · External reference
Nitrogen removal
2020 · External reference
Fastp: an ultra-fast all-in-one FASTQ preprocessor
10.1093/bioinformatics/bty560 · 2018 · External reference
Why is metabolic labour divided in nitrification?
10.1016/j.tim.2006.03.006 · 2006 · External reference
Complete nitrification by Nitrospira bacteria
10.1038/nature16461 · 2015 · External reference
Haemoglobins of mycobacteria: structural features and biological functions
10.1016/b978-0-12-407693-8.00005-4 · 2013 · External reference
The cytochrome bd quinol oxidase in Escherichia coli has an extremely high oxygen affinity and two oxygen-binding haems: implications for regulation of activity in vivo by oxygen inhibition
10.1099/00221287-142-4-755 · 1996 · External reference
Insights into nitrous oxide mitigation strategies in wastewater treatment and challenges for wider implementation
10.1021/acs.est.1c00840 · 2021 · External reference
New insights on trehalose: a multifunctional molecule
10.1093/glycob/cwg047 · 2003 · External reference
Oxidative stress, protein damage and repair in bacteria
10.1038/nrmicro.2017.26 · 2017 · External reference
Comammox Nitrospira are abundant ammonia oxidizers in diverse groundwater-fed rapid sand filter communities
10.1111/1462-2920.14033 · 2018 · External reference
The enrichment characterisation of Nitrospira under high DO conditions
10.1080/09593330.2023.2165457 · 2024 · External reference
Growth of Nitrosococcus -related ammonia oxidizing bacteria coincides with extremely low pH values in wastewater with high ammonia content
10.1021/acs.est.7b00392 · 2017 · External reference
Streamlined regulation and gene loss as adaptive mechanisms in Prochlorococcus for optimized nitrogen utilization in oligotrophic environments
10.1128/mmbr.68.4.630-638.2004 · 2004 · External reference
Adaptation of aerobic respiration to low O2 environments
10.1073/pnas.1018958108 · 2011 · External reference
Unveiling unique microbial nitrogen cycling and nitrification driver in coastal Antarctica
10.1038/s41467-024-47392-4 · 2024 · External reference
Energy conservation via electron-transferring flavoprotein in anaerobic bacteria
10.1128/jb.01422-07 · 2008 · External reference
Competitive enrichment of comammox Nitrospira in floccular sludge
10.1016/j.watres.2024.121151 · 2024 · External reference
Enrichment and kinetic profiling of Candidatus Nitrospira nitrosa culture reveal mechanisms underlying its prevalence in wastewater treatment systems
2025 · External reference
The molecular mechanisms and physiological consequences of oxidative stress: lessons from a model bacterium
10.1038/nrmicro3032 · 2013 · External reference
Unresolved reference
2023 · External reference
Kinetic characterization of nitrifying pure cultures in chemostate
2006 · External reference
Differential expression of multiple terminal oxidases for aerobic respiration in Pseudomonas aeruginosa
10.1111/j.1462-2920.2009.02109.x · 2010 · External reference
Pilot plant demonstration of stable and efficient high rate biological nutrient removal with low dissolved oxygen conditions
10.1016/j.watres.2017.05.029 · 2017 · External reference
HISAT: a fast spliced aligner with low memory requirements
10.1038/nmeth.3317 · 2015 · External reference
Low yield and abiotic origin of N2O formed by the complete nitrifier Nitrospira inopinata
10.1038/s41467-019-09790-x · 2019 · External reference
Kinetic analysis of a complete nitrifier reveals an oligotrophic lifestyle
10.1038/nature23679 · 2017 · External reference
Single cell analyses reveal contrasting life strategies of the two main nitrifiers in the ocean
10.1038/s41467-020-14542-3 · 2020 · External reference
Expanded metabolic versatility of ubiquitous nitrite-oxidizing bacteria from the genus Nitrospira
10.1073/pnas.1506533112 · 2015 · External reference
Full-scale partial nitritation/anammox experiences – an application survey
10.1016/j.watres.2014.02.032 · 2014 · External reference
Complete ammonia oxidation: an important control on nitrification in engineered ecosystems?
10.1016/j.copbio.2018.01.015 · 2018 · External reference
Cellular adaptation to hypoxia through hypoxia inducible factors and beyond
10.1038/s41580-020-0227-y · 2020 · External reference
Selective enrichment and metagenomic analysis of three novel comammox Nitrospira in a urine-fed membrane bioreactor
10.1038/s43705-021-00005-3 · 2021 · External reference
Revealing taxon-specific heavy metal-resistance mechanisms in denitrifying phosphorus removal sludge using genome-centric metaproteomics
10.1186/s40168-021-01016-x · 2021 · External reference
Long-term low DO enriches and shifts nitrifier community in activated sludge
10.1021/es304647y · 2013 · External reference
Hemoglobin based oxygen carrier and its application in biomedicine
10.1016/j.ccr.2025.216508 · 2025 · External reference
Sustainable wastewater management through nitrogen-cycling microorganisms
10.1038/s44221-024-00307-5 · 2024 · External reference
The genome of Nitrospina gracilis illuminates the metabolism and evolution of the major marine nitrite oxidizer
10.3389/fmicb.2013.00027 · 2013 · External reference
A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria
10.1073/pnas.1003860107 · 2010 · External reference
Consequences of mass transfer effects on the kinetics of nitrifiers
10.1016/j.watres.2005.09.020 · 2005 · External reference
Domestic wastewater treatment as a net energy producer — can this be achieved?
10.1021/es2014264 · 2011 · External reference
A non-sense mutation in the putative anti-mutator gene ada/alkA of Mycobacterium tuberculosis and M. bovis isolates suggests convergent evolution
10.1186/1471-2180-7-39 · 2007 · External reference
Nitrification in wastewater treatment
2014 · External reference
Cyanate as an energy source for nitrifiers
10.1038/nature14856 · 2015 · External reference
Evolutionary ecology of natural comammox Nitrospira populations
10.1128/msystems.01139-21 · 2022 · External reference
Comparative genomics sheds light on niche differentiation and the evolutionary history of comammox Nitrospira
10.1038/s41396-018-0083-3 · 2018 · External reference
Evaluating the effect of dissolved oxygen on ammonia-oxidizing bacterial communities in activated sludge
10.1016/j.watres.2004.04.047 · 2004 · External reference
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
10.1038/nbt.3122 · 2015 · External reference
Exploring the ecological niche of comammox Nitrospira by in-situ enrichment within mainstream nitrification systems
10.1016/j.watres.2025.123810 · 2025 · External reference
Combining continuous flow aerobic granulation using an external selector and carbon-efficient nutrient removal with AvN control in a full-scale simultaneous nitrification-denitrification process
10.1016/j.watres.2021.117991 · 2022 · External reference
Unresolved reference
2018 · External reference
Comammox Nitrospira are the dominant ammonia oxidizers in a mainstream low dissolved oxygen nitrification reactor
10.1016/j.watres.2019.03.060 · 2019 · External reference
Enrichment and physiological characterization of a novel comammox Nitrospira indicates ammonium inhibition of complete nitrification
10.1038/s41396-020-00827-4 · 2021 · External reference
Gene expression changes and community turnover differentially shape the global ocean metatranscriptome
10.1016/j.cell.2019.10.014 · 2019 · External reference
Are respiratory enzymes the primary sources of Intracellular hydrogen peroxide?
10.1074/jbc.m408754200 · 2004 · External reference
The Yersinia pseudotuberculosis Yut protein, a new type of urea transporter homologous to eukaryotic channels and functionally interchangeable in vitro with the Helicobacter pylori UreI protein
10.1046/j.1365-2958.2002.03096.x · 2002 · External reference
Comammox Nitrospira species dominate in an efficient partial nitrification–anammox bioreactor for treating ammonium at low loadings
10.1021/acs.est.0c05777 · 2021 · External reference
Nitrate-nitrite fate and oxygen sensing in dormant Mycobacterium tuberculosis: a bioinorganic approach highlighting the importance of transition metals
10.1016/j.ccr.2020.213476 · 2020 · External reference
The effect of dissolved oxygen concentration on nitrification
10.1016/0043-1354(80)90122-0 · 1980 · External reference
The OxyR regulon
10.1007/bf00548927 · 1990 · External reference
Electron transfer flavoproteins
2021 · External reference
Complete nitrification by a single microorganism
10.1038/nature16459 · 2015 · External reference
Loss of OxyR reduces efficacy of oxygen respiration in Shewanella oneidensis
2017 · External reference
Comammox in drinking water systems
10.1016/j.watres.2017.03.042 · 2017 · External reference
A 20-year journey of partial nitritation and anammox (PN/A): from sidestream toward mainstream
10.1021/acs.est.1c06107 · 2022 · External reference
Different oxygen affinities of methanotrophs and comammox Nitrospira inform an electrically induced symbiosis for nitrogen loss
10.1016/j.watres.2024.121606 · 2024 · External reference
Comammox rather than AOB dominated the efficient autotrophic nitrification-denitrification process in an extremely oxygen-limited environment
10.1016/j.watres.2024.122572 · 2025 · External reference
Explaining the coexistence of complete ammonium-oxidizing bacteria and canonical nitrite-oxidizing bacteria under mainstream wastewater conditions from a substrate affinity perspective
10.1016/j.envres.2025.123341 · 2026 · External reference
Activity and metabolic versatility of complete ammonia oxidizers in full-scale wastewater treatment systems
10.1128/mbio.03175-19 · 2020 · External reference
Comammox activity dominates nitrification process in the sediments of plateau wetland
10.1016/j.watres.2021.117774 · 2021 · External reference
Unique characteristics of acid-tolerant comammox bacteria revealed by multi-omics analyses
10.1093/ismeco/ycag070 · 2026 · External reference
Hot spring distribution and survival mechanisms of thermophilic comammox Nitrospira
10.1038/s41396-023-01409-w · 2023 · External reference
Selective enrichment of comammox Nitrospira in a moving bed biofilm reactor with sufficient oxygen supply
10.1021/acs.est.2c03299 · 2022 · External reference
Crystal structure of a nitrate/nitrite exchanger
10.1038/nature12139 · 2013 · External reference
Combined effect of loss of the caa3 oxidase and Crp regulation drives Shewanella to thrive in redox-stratified environments
10.1038/ismej.2013.62 · 2013 · External reference