Research graph
References from Replicon engineering-driven modular synthetic biology toolkit for efficiently iterative genome editing in Fusarium venenatum. Local targets link to admitted publications; unresolved targets remain external evidence.
Deciphering the landscape of cis-acting sequences in natural yeast transcript leaders
10.1093/nar/gkaf165 · 2025 · External reference
The plasmid replicator AMA1 in Aspergillus nidulans is an inverted duplication of a low-copy-number dispersed genomic repeat
10.1046/j.1365-2958.1996.400937.x · 1996 · External reference
The MEME suite
10.1093/nar/gkv416 · 2015 · External reference
2A peptides enable simplified discovery and heterologous production of fungal bioactive metabolites in Yarrowia lipolytica
10.1007/s00253-026-13797-y · 2026 · External reference
Tandem repeats finder: a program to analyze DNA sequences
10.1093/nar/27.2.573 · 1999 · External reference
CRISPR-COPIES: an in silico platform for discovery of neutral integration sites for CRISPR/Cas-facilitated gene integration
10.1093/nar/gkae062 · 2024 · External reference
Food systems are responsible for a third of global anthropogenic GHG emissions
10.1038/s43016-021-00225-9 · 2021 · External reference
Identification and characterization of the mitochondrial replication origin for stable and episomal expression in Yarrowia lipolytica
10.1021/acssynbio.0c00619 · 2021 · External reference
Autonomously replicating plasmids carrying the AMA1 region in Penicillium chrysogenum
10.1007/bf02221518 · 1996 · External reference
Mycoprotein: a healthy and sustainable source of alternative protein-based foods
10.1146/annurev-food-111523-121802 · 2025 · External reference
Mechanisms of replication and repair in mitochondrial DNA deletion formation
10.1093/nar/gkaa804 · 2020 · External reference
Biosynthesis of 3-Hydroxy-3-Methylbutyrate from l-Leucine by whole-cell catalysis
10.1021/acs.jafc.1c00494 · 2021 · External reference
Meat consumption, health, and the environment
10.1126/science.aam5324 · 2018 · External reference
Proksee: in-depth characterization and visualization of bacterial genomes
10.1093/nar/gkad326 · 2023 · External reference
Enhancing mycoprotein yield: Metabolic modulation of chitin synthase in Fusarium venenatum
10.1021/acs.jafc.4c07105 · 2024 · External reference
De novo biosynthesis of 3-hydroxy-3-methylbutyrate as anti-catabolic supplement by metabolically engineered Escherichia coli
10.1016/j.ymben.2024.05.006 · 2024 · External reference
Genetic approach to discover a valuable gene for enhanced nutritional value in the edible filamentous fungus Fusarium venenatum
10.1002/fft2.485 · 2024 · External reference
Manipulation of sterol homeostasis for the production of 24-epi-ergosterol in industrial yeast
10.1038/s41467-023-36007-z · 2023 · External reference
The basidiomycete Lentinus edodes linear mitochondrial DNA plasmid contains a segment exhibiting a high autonomously replicating sequence activity in Saccharomyces cerevisiae
10.1093/nar/18.6.1395 · 1990 · External reference
CHOPCHOP v3: expanding the CRISPR web toolbox beyond genome editing
10.1093/nar/gkz365 · 2019 · External reference
Developing polycistronic expression tool in Yarrowia lipolytica
10.1016/j.synbio.2024.09.010 · 2025 · External reference
Predicting DNA structure using a deep learning method
10.1038/s41467-024-45191-5 · 2024 · External reference
Engineering plasmids with synthetic origins of replication
2026 · External reference
Beta-hydroxy-beta-methylbutyrate (HMB) ameliorates DSS-induced colitis by inhibiting ERK/NF-κB activation in macrophages
10.1016/j.phymed.2025.156492 · 2025 · External reference
Improving cellular protein content of Saccharomyces cerevisiae based on adaptive evolution and flow cytometry-aided high throughput screening
10.1021/acs.jafc.4c09632 · 2025 · External reference
Edible mycelium bioengineered for enhanced nutritional value and sensory appeal using a modular synthetic biology toolkit
10.1038/s41467-024-46314-8 · 2024 · External reference
Mycoprotein: production and nutritional aspects: a review
10.1039/d3fb00169e · 2024 · External reference
Genomic deletions in Aureobasidium pullulans by an AMA1 plasmid for gRNA and CRISPR/Cas9 expression
10.1186/s40694-024-00175-4 · 2024 · External reference
Incorporation of novel foods in European diets can reduce global warming potential, water use and land use by over 80%
10.1038/s43016-022-00489-9 · 2022 · External reference
Efficient CRISPR/Cas9 system based on autonomously replicating plasmid with an AMA1 sequence and precisely targeted gene deletion in the edible fungus, Cordyceps militaris
10.1111/1751-7915.14107 · 2022 · External reference
Systematic identification and characterization of eukaryotic and viral 2A peptide-bond-skipping sequences
10.1016/j.celrep.2025.115822 · 2025 · External reference
Next-generation AMA1-based plasmids for enhanced heterologous expression in filamentous fungi
10.1111/1751-7915.70010 · 2024 · External reference
Plant-based and cell-based approaches to meat production
10.1038/s41467-020-20061-y · 2020 · External reference
A mitochondrial autonomously replicating sequence from Pichia pastoris for uniform high level recombinant protein production
2017 · External reference
Mechanisms and regulation of human mitochondrial transcription
10.1038/s41580-023-00661-4 · 2024 · External reference
Engineered bacterial orthogonal DNA replication system for continuous evolution
10.1038/s41589-023-01387-2 · 2023 · External reference
Identification of neutral genome integration sites with high expression and high integration efficiency in Fusarium venenatum TB01
10.1016/j.synbio.2022.12.006 · 2023 · External reference
Evasion of Cas9 toxicity to develop an efficient genome editing system and its application to increase ethanol yield in Fusarium venenatum TB01
10.1007/s00253-022-12178-5 · 2022 · External reference
Establishment of high-efficiency screening system for gene deletion in Fusarium venenatum TB01
10.3390/jof8020169 · 2022 · External reference
Efficient mycoprotein production with low CO(2) emissions through metabolic engineering and fermentation optimization of Fusarium venenatum
10.1021/acs.jafc.3c08509 · 2024 · External reference
Synchronous bioproduction of betanin and mycoprotein in the engineered edible fungus Fusarium venenatum
10.1021/acs.jafc.4c06071 · 2024 · External reference
Edible fungus Fusarium venenatum: advances, challenges, and engineering strategies for future food production
10.1016/j.ymben.2025.09.009 · 2026 · External reference
Quantitative characterization of filamentous fungal promoters on a single-cell resolution to discover cryptic natural products
10.1007/s11427-022-2175-0 · 2023 · External reference
CRISPR/Cas9 mediated editing of the Quorn fungus Fusarium venenatum A3/5 by transient expression of Cas9 and sgRNAs targeting endogenous marker gene PKS12
10.1186/s40694-021-00121-8 · 2021 · External reference
Dual enhancement of mycoprotein nutrition and sustainability via CRISPR-mediated metabolic engineering of Fusarium venenatum
10.1016/j.tibtech.2025.09.016 · 2026 · External reference
Cell wall engineering-guided strategy for high-efficiency biosynthesis of nutrient-fortified Fusarium venenatum mycoprotein
10.1016/j.biortech.2025.133005 · 2025 · External reference
Autonomously replicating fragments of mitochondrial DNA from Penicillium urticae in Saccharomyces cerevisiae
10.1016/0922-338x(91)90281-k · 1991 · External reference
Formation mechanism of yeast-soy protein extrudates during high-moisture extrusion and their digestive properties
10.1016/j.foodhyd.2023.109093 · 2023 · External reference
Physiological benefits, applications, and future directions of β-Hydroxy-β-Methylbutyrate (HMB) in food and health industries
2025 · External reference
Comparative efficacy of amino acid availability and peptidomic analysis of alternative proteins from different sources under dynamic in vitro protein digestion
10.1016/j.foodhyd.2024.110665 · 2025 · External reference
