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References from MIPDH: A Novel Computational Model for Predicting microRNA–mRNA Interactions by DeepWalk on a Heterogeneous Network. Local targets link to admitted publications; unresolved targets remain external evidence.
The enigmatic world of mRNA-like ncRNAs: their role in human evolution and in human diseases
2008 · External reference
The functions of animal microRNAs
10.1038/nature02871 · 2004 · External reference
The microRNA. org resource: targets and expression
10.1093/nar/gkm995 · 2008 · External reference
Modular regulatory principles of large non-coding RNAs
10.1038/nature10887 · 2012 · External reference
psRNATarget: a plant small RNA target analysis server (2017 release)
10.1093/nar/gky316 · 2018 · External reference
MicroRNAs: target recognition and regulatory functions
10.1016/j.cell.2009.01.002 · 2009 · External reference
MicroRNA functions in animal development and human disease
10.1242/dev.02073 · 2005 · External reference
Computational Tools for microRNA Target Prediction
10.1016/b978-0-12-814513-5.00006-4 · 2019 · External reference
Safety and activity of microRNA-loaded minicells in patients with recurrent malignant pleural mesothelioma: a first-in-man, phase 1, open-label, dose-escalation study
10.1016/s1470-2045(17)30621-6 · 2017 · External reference
Targeting miR-155 to treat experimental scleroderma
10.1038/srep20314 · 2016 · External reference
Exosome miR-335 as a novel therapeutic strategy in hepatocellular carcinoma
10.1002/hep.29586 · 2018 · External reference
Role of MicroRNA miR-27a and miR-451 in the regulation of MDR1/P-glycoprotein expression in human cancer cells
10.1016/j.bcp.2008.06.007 · 2008 · External reference
Loss of miR-122 expression in liver cancer correlates with suppression of the hepatic phenotype and gain of metastatic properties
10.1038/onc.2009.211 · 2009 · External reference
Dysregulation of microRNAs after myocardial infarction reveals a role of miR-29 in cardiac fibrosis
10.1073/pnas.0805038105 · 2008 · External reference
The tumor suppressor roles of miR-433 and miR-127 in gastric cancer
10.3390/ijms140714171 · 2013 · External reference
Comprehensive modeling of microRNA targets predicts functional non-conserved and non-canonical sites
10.1186/gb-2010-11-8-r90 · 2010 · External reference
Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
10.1016/j.cell.2004.12.035 · 2005 · External reference
Efficient use of accessibility in microRNA target prediction
10.1093/nar/gkq768 · 2010 · External reference
mRNA secondary structures fold sequentially but exchange rapidly in vivo
10.1371/journal.pbio.1000307 · 2010 · External reference
A pattern-based method for the identification of MicroRNA binding sites and their corresponding heteroduplexes
10.1016/j.cell.2006.07.031 · 2006 · External reference
Prediction of mammalian microRNA targets
10.1016/s0092-8674(03)01018-3 · 2003 · External reference
Specificity of microRNA target selection in translational repression
10.1101/gad.1184404 · 2004 · External reference
Survey of computational algorithms for microRNA target prediction
10.2174/138920209789208219 · 2009 · External reference
Composition of seed sequence is a major determinant of microRNA targeting patterns
10.1093/bioinformatics/btu045 · 2014 · External reference
The role of site accessibility in microRNA target recognition
10.1038/ng2135 · 2007 · External reference
TargetSpy: a supervised machine learning approach for microRNA target prediction
10.1186/1471-2105-11-292 · 2010 · External reference
TarBase: A comprehensive database of experimentally supported animal microRNA targets
10.1261/rna.2239606 · 2006 · External reference
Experimental strategies for microRNA target identification
10.1093/nar/gkr330 · 2011 · External reference
LNRLMI: Linear neighbour representation for predicting lncRNA-miRNA interactions
10.1111/jcmm.14583 · 2020 · External reference
Prediction of Self-Interacting Proteins from Protein Sequence Information Based on Random Projection Model and Fast Fourier Transform
10.3390/ijms20040930 · 2019 · External reference
Predicting Drug-Disease Associations via Using Gaussian Interaction Profile and Kernel-Based Autoencoder
10.1155/2019/2426958 · 2019 · External reference
LMTRDA: Using logistic model tree to predict MiRNA-disease associations by fusing multi-source information of sequences and similarities
10.1371/journal.pcbi.1006865 · 2019 · External reference
ACP-DL: A Deep Learning Long Short-Term Memory Model to Predict Anticancer Peptides Using High-Efficiency Feature Representation
10.1016/j.omtn.2019.04.025 · 2019 · External reference
MLMDA: a machine learning approach to predict and validate MicroRNA–disease associations by integrating of heterogenous information sources
10.1186/s12967-019-2009-x · 2019 · External reference
10.1007/978-3-030-26766-7_36
10.1007/978-3-030-26766-7_36 · External reference
miRDB: an online resource for microRNA target prediction and functional annotations
10.1093/nar/gku1104 · 2014 · External reference
Improving microRNA target prediction by modeling with unambiguously identified microRNA-target pairs from CLIP-ligation studies
10.1093/bioinformatics/btw002 · 2016 · External reference
STarMir Tools for Prediction of microRNA binding sites
10.1007/978-1-4939-6433-8_6 · 2016 · External reference
Constructing prediction models from expression profiles for large scale lncRNA–miRNA interaction profiling
10.1093/bioinformatics/btx672 · 2017 · External reference
Inferring potential small molecule–miRNA association based on triple layer heterogeneous network
10.1186/s13321-018-0284-9 · 2018 · External reference
A novel method for identifying potential disease-related miRNAs via a disease–miRNA–target heterogeneous network
10.1039/c7mb00485k · 2017 · External reference
Construction and Comprehensive Analysis of a Molecular Association Network via lncRNA–miRNA–Disease–Drug–Protein Graph
10.3390/cells8080866 · 2019 · External reference
10.1145/2623330.2623732
10.1145/2623330.2623732 · External reference
circRNA disease: a manually curated database of experimentally supported circRNA-disease associations
10.1038/s41419-018-0503-3 · 2018 · External reference
NPInter v2. 0: an updated database of ncRNA interactions
10.1093/nar/gkt1057 · 2013 · External reference
DrugBank 5.0: a major update to the DrugBank database for 2018
10.1093/nar/gkx1037 · 2018 · External reference
TransmiR v2. 0: an updated transcription factor-microRNA regulation database
10.1093/nar/gky1023 · 2018 · External reference
The pharmacomicrobiomics portal: a database for drug-microbiome interactions
10.2174/187569212802510030 · 2012 · External reference
DisGeNET: a comprehensive platform integrating information on human disease-associated genes and variants
10.1093/nar/gkw943 · 2017 · External reference
lncRNASNP2: an updated database of functional SNPs and mutations in human and mouse lncRNAs
10.1093/nar/gkx1004 · 2017 · External reference
An analysis of human microbe–disease associations
10.1093/bib/bbw005 · 2016 · External reference
SM2miR: a database of the experimentally validated small molecules’ effects on microRNA expression
10.1093/bioinformatics/bts698 · 2012 · External reference
HMDD v2. 0: a database for experimentally supported human microRNA and disease associations
10.1093/nar/gkt1023 · 2013 · External reference
PharmGKB: the pharmacogenetics knowledge base
10.1093/nar/30.1.163 · 2002 · External reference
CircR2Disease: a manually curated database for experimentally supported circular RNAs associated with various diseases
10.1093/database/bay044 · 2018 · External reference
The comparative toxicogenomics database: update 2019
10.1093/nar/gky868 · 2018 · External reference
miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions
10.1093/nar/gkx1067 · 2017 · External reference
LncRNA2Target v2. 0: a comprehensive database for target genes of lncRNAs in human and mouse
10.1093/nar/gky1051 · 2018 · External reference
LncRNADisease: a database for long-non-coding RNA-associated diseases
10.1093/nar/gks1099 · 2012 · External reference
SomamiR 2.0: a database of cancer somatic mutations altering microRNA–ceRNA interactions
10.1093/nar/gkv1220 · 2015 · External reference
LncRNADisease 2.0: an updated database of long non-coding RNA-associated diseases
10.1093/nar/gky905 · 2018 · External reference
Can peripheral MicroRNA expression data serve as epigenomic (upstream) biomarkers of Alzheimer’s disease?
10.1089/omi.2016.0099 · 2016 · External reference
Profiling of miRNAs in serum of children with attention-deficit hyperactivity disorder shows significant alterations
10.1016/j.jpsychires.2018.12.013 · 2019 · External reference
Extract of Stellerachamaejasme L (ESC) inhibits growth and metastasis of human hepatocellular carcinoma via regulating microRNA expression
10.1186/s12906-018-2123-y · 2018 · External reference
