Research graph
References from Biocatalytic Synthesis of dNTPs from Bacterial Biomass. Local targets link to admitted publications; unresolved targets remain external evidence.
Nucleoside Triphosphates ─ Building Blocks for the Modification of Nucleic Acids
10.3390/molecules171113569 · 2012 · External reference
Recent Advances in the Polymerase Chain Reaction
10.1126/science.2047872 · 1991 · External reference
Studies of Phosphorylation. III. Selective Phosphorylation of Unprotected Nucleosides
10.1246/bcsj.42.3505 · 1969 · External reference
Rapid and Efficient Synthesis of Nucleoside 5′-0-(1-Thiotriphosphates), 5′-Triphosphates and 2′,3′-Cyclophosphorothioates Using 2-Chloro-4H-1,3,2-Benzodioxaphosphorin-4-One
10.1021/jo00264a024 · 1989 · External reference
A Novel Method for Phosphorylation of Nucleosides to 5′-Nucleotides
10.1016/s0040-4039(01)89915-9 · 1967 · External reference
Recent Trends in Nucleotide Synthesis
10.1021/acs.chemrev.6b00174 · 2016 · External reference
Phosphorylation of Nucleosides in Aqueous-Solution Using Trimetaphosphate-Formation of Nucleoside Triphosphates
1978 · External reference
Phosphorylation of Adenosine with Trimetaphosphate Under Simulated Prebiotic Conditions
10.1023/a:1016513114799 · 2002 · External reference
The Exceptional Solubility of Cyclic Trimetaphosphate in the Presence of Mg2+ and Ca2+
10.3390/life16010184 · 2026 · External reference
Enzymatic RNA Production from NTPs Synthesized from Nucleosides and Trimetaphosphate
10.1002/cbic.202100085 · 2021 · External reference
Abiotic Synthesis of Nucleoside 5′-Triphosphates with Nickel Borate and Cyclic Trimetaphosphate (CTMP)
10.1089/ast.2020.2264 · 2021 · External reference
Synthesis of Nucleoside Triphosphates from 2′-3′-Protected Nucleosides Using Trimetaphosphate
10.1021/acs.orglett.5b03624 · 2016 · External reference
Prebiotic Synthesis and Triphosphorylation of 3′-Amino-TNA Nucleosides
10.1038/s41557-022-00982-5 · 2022 · External reference
A Single Deoxynucleoside Kinase Variant from Drosophila Melanogaster Synthesizes Monophosphates of Nucleosides That Are Components of an Expanded Genetic System
10.1021/acssynbio.6b00228 · 2017 · External reference
Mammalian Deoxyribonucleoside Kinases
10.1016/0163-7258(95)00015-9 · 1995 · External reference
A Few Amino Acid Substitutions Can Convert Deoxyribonucleoside Kinase Specificity from Pyrimidines to Purines
10.1093/emboj/21.7.1873 · 2002 · External reference
Structure and Function of Cellular Deoxyribonucleoside Kinases
10.1007/s00018-002-8511-x · 2002 · External reference
Enzymatic Synthesis of Modified Nucleoside 5′-Monophosphates
10.3390/catal12111401 · 2022 · External reference
Biocatalytic Synthesis of 2′-deoxynucleotide 5′-triphosphates from Bacterial Genomic DNA: Proof of Principle
10.1002/bit.28374 · 2023 · External reference
Hydrolytic Approach for Production of Deoxyribonucleoside-and Ribonucleoside-5′-Monophosphates and Enzymatic Synthesis of Their Polyphosphates
10.1134/s0006297906010123 · 2006 · External reference
Characterization of the Nucleoside Monophosphate Kinase from Thermus Thermophilus Phage P23-45 and Its Application in the Biosynthesis of Deoxynucleoside Triphosphates
10.1093/bbb/zbaf018 · 2025 · External reference
Total Biosynthesis of Deoxynucleoside Triphosphates Using Deoxynucleoside Monophosphate Kinases for PCR Application
10.1002/bit.21498 · 2007 · External reference
Biosynthesis of Deoxynucleoside Triphosphates, dCTP and dTTP: Reaction Mechanism and Kinetics
10.1016/j.enzmictec.2004.09.011 · 2005 · External reference
ATP Recycling with Cell Lysate for Enzyme-Catalyzed Chemical Synthesis, Protein Expression and PCR
10.1021/acschembio.6b00838 · 2016 · External reference
Enzymatic Synthesis of Nucleoside Triphosphates and Deoxynucleoside Triphosphates by Surface-Displayed Kinases
10.1007/s12010-019-03138-3 · 2020 · External reference
Recent Developments and Challenges for the Industrial Implementation of Polyphosphate Kinases
10.1002/cctc.202100688 · 2021 · External reference
Polyphosphate - an Ancient Energy Source and Active Metabolic Regulator
10.1186/1475-2859-10-63 · 2011 · External reference
A New Subfamily of Polyphosphate Kinase 2 (Class III PPK2) Catalyzes Both Nucleoside Monophosphate Phosphorylation and Nucleoside Diphosphate Phosphorylation
10.1128/aem.03971-13 · 2014 · External reference
Polyphosphate Kinase 2 (PPK2) Enzymes: Structure, Function, and Roles in Bacterial Physiology and Virulence
10.3390/ijms23020670 · 2022 · External reference
Substrate Recognition and Mechanism Revealed by Ligand-Bound Polyphosphate Kinase 2 Structures
10.1073/pnas.1710741115 · 2018 · External reference
Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases
10.1021/acscatal.8b03151 · 2018 · External reference
Polyphosphate-Dependent Synthesis of ATP and ADP by the Family-2 Polyphosphate Kinases in Bacteria
10.1073/pnas.0807563105 · 2008 · External reference
Characterization of Polyphosphate Kinases for the Synthesis of GSH with ATP Regeneration from AMP
10.1016/j.enzmictec.2021.109853 · 2021 · External reference
Immobilization of a Polyphosphate Kinase 2 by Coordinative Self-Assembly of His-Tagged Units with Metal-Organic Frameworks and Its Application in ATP Regeneration from AMP
10.1016/j.colsurfb.2019.05.054 · 2019 · External reference
Structural Insights into Broad-Range Polyphosphate Kinase 2-II Enzymes Applicable for Pyrimidine Nucleoside Diphosphate Synthesis
10.1002/cbic.202400970 · 2025 · External reference
The Minimum Energy Required to Build a Cell
10.1038/s41598-024-54303-6 · 2024 · External reference
Biocatalytic Cascade of Polyphosphate Kinase and Sucrose Synthase for Synthesis of Nucleotide-Activated Derivatives of Glucose
10.1002/adsc.201601078 · 2017 · External reference
A Multi-enzyme Cascade for the Biosynthesis of AICA Ribonucleoside Di- and Triphosphate
10.1002/cbic.202100596 · 2022 · External reference
Broadening the Substrate Scope of a Polyphosphate Kinase for Canonical and Non-Canonical Nucleotides
10.1002/cctc.202400181 · 2024 · External reference
Characterization of Saccharomyces Cerevisiae Thymidylate Kinase, the CDC8 Gene Product. General Properties, Kinetic Analysis, and Subcellular Localization
10.1016/s0021-9258(17)42612-3 · 1984 · External reference
Characterization of Human UMP/CMP Kinase and Its Phosphorylation of d- and l-Form Deoxycytidine Analogue Monophosphates
2002 · External reference
DNA Synthesis from Diphosphate Substrates by DNA Polymerases
10.1073/pnas.1712193115 · 2018 · External reference
Substrate Recognition and Mechanism Revealed by Ligand-Bound Polyphosphate Kinase 2 Structures
10.1073/pnas.1710741115 · 2018 · External reference
The PyMOL molecular graphics system
2015 · External reference
Improved Treatment of Ligands and Coupling Effects in Empirical Calculation and Rationalization of pKa Values
10.1021/ct200133y · 2011 · External reference
PROPKA3: Consistent Treatment of Internal and Surface Residues in Empirical pKa Predictions
10.1021/ct100578z · 2011 · External reference
ff19SB: Amino-Acid-Specific Protein Backbone Parameters Trained against Quantum Mechanics Energy Surfaces in Solution
10.1021/acs.jctc.9b00591 · 2020 · External reference
Development and testing of a general amber force field
10.1002/jcc.20035 · 2004 · External reference
Automatic Atom Type and Bond Type Perception in Molecular Mechanical Calculations
10.1016/j.jmgm.2005.12.005 · 2006 · External reference
Comparison of Simple Potential Functions for Simulating Liquid Water
10.1063/1.445869 · 1983 · External reference
Langevin Stabilization of Molecular Dynamics
10.1063/1.1332996 · 2001 · External reference
Molecular Dynamics with Coupling to an External Bath
10.1063/1.448118 · 1984 · External reference
Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes
10.1016/0021-9991(77)90098-5 · 1977 · External reference
Particle Mesh Ewald: An N·log(N) Method for Ewald Sums in Large Systems
10.1063/1.464397 · 1993 · External reference
Electrostatics of Nanosystems: Application to Microtubules and the Ribosome
10.1073/pnas.181342398 · 2001 · External reference
Improvements to the APBS Biomolecular Solvation Software Suite
10.1002/pro.3280 · 2018 · External reference
Multiwfn: A Multifunctional Wavefunction Analyzer
10.1002/jcc.22885 · 2012 · External reference
A Comprehensive Electron Wavefunction Analysis Toolbox for Chemists, Multiwfn
10.1063/5.0216272 · 2024 · External reference
Graphically revealing weak interactions in dynamic environments using amIGM method
10.1007/430_2025_95 · 2025 · External reference
MMPBSA.Py: An Efficient Program for End-State Free Energy Calculations
10.1021/ct300418h · 2012 · External reference
Unresolved reference
2024 · External reference
Biocatalytic Cascade of Polyphosphate Kinase and Sucrose Synthase for Synthesis of Nucleotide-Activated Derivatives of Glucose
10.1002/adsc.201601078 · ExternalCitation · doi-reference
Total Biosynthesis of Deoxynucleoside Triphosphates Using Deoxynucleoside Monophosphate Kinases for PCR Application
10.1002/bit.21498 · ExternalCitation · doi-reference
Biocatalytic Synthesis of 2′-deoxynucleotide 5′-triphosphates from Bacterial Genomic DNA: Proof of Principle
10.1002/bit.28374 · ExternalCitation · doi-reference
Enzymatic RNA Production from NTPs Synthesized from Nucleosides and Trimetaphosphate
10.1002/cbic.202100085 · ExternalCitation · doi-reference
A Multi-enzyme Cascade for the Biosynthesis of AICA Ribonucleoside Di- and Triphosphate
10.1002/cbic.202100596 · ExternalCitation · doi-reference
Structural Insights into Broad-Range Polyphosphate Kinase 2-II Enzymes Applicable for Pyrimidine Nucleoside Diphosphate Synthesis
10.1002/cbic.202400970 · ExternalCitation · doi-reference
Recent Developments and Challenges for the Industrial Implementation of Polyphosphate Kinases
10.1002/cctc.202100688 · ExternalCitation · doi-reference
Broadening the Substrate Scope of a Polyphosphate Kinase for Canonical and Non-Canonical Nucleotides
10.1002/cctc.202400181 · ExternalCitation · doi-reference
Development and testing of a general amber force field
10.1002/jcc.20035 · ExternalCitation · doi-reference
Multiwfn: A Multifunctional Wavefunction Analyzer
10.1002/jcc.22885 · ExternalCitation · doi-reference
Improvements to the APBS Biomolecular Solvation Software Suite
10.1002/pro.3280 · ExternalCitation · doi-reference
Graphically revealing weak interactions in dynamic environments using amIGM method
10.1007/430_2025_95 · ExternalCitation · doi-reference
Structure and Function of Cellular Deoxyribonucleoside Kinases
10.1007/s00018-002-8511-x · ExternalCitation · doi-reference
Enzymatic Synthesis of Nucleoside Triphosphates and Deoxynucleoside Triphosphates by Surface-Displayed Kinases
10.1007/s12010-019-03138-3 · ExternalCitation · doi-reference
Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes
10.1016/0021-9991(77)90098-5 · ExternalCitation · doi-reference
Mammalian Deoxyribonucleoside Kinases
10.1016/0163-7258(95)00015-9 · ExternalCitation · doi-reference
Immobilization of a Polyphosphate Kinase 2 by Coordinative Self-Assembly of His-Tagged Units with Metal-Organic Frameworks and Its Application in ATP Regeneration from AMP
10.1016/j.colsurfb.2019.05.054 · ExternalCitation · doi-reference
Biosynthesis of Deoxynucleoside Triphosphates, dCTP and dTTP: Reaction Mechanism and Kinetics
10.1016/j.enzmictec.2004.09.011 · ExternalCitation · doi-reference
Characterization of Polyphosphate Kinases for the Synthesis of GSH with ATP Regeneration from AMP
10.1016/j.enzmictec.2021.109853 · ExternalCitation · doi-reference
Automatic Atom Type and Bond Type Perception in Molecular Mechanical Calculations
10.1016/j.jmgm.2005.12.005 · ExternalCitation · doi-reference
Characterization of Saccharomyces Cerevisiae Thymidylate Kinase, the CDC8 Gene Product. General Properties, Kinetic Analysis, and Subcellular Localization
10.1016/s0021-9258(17)42612-3 · ExternalCitation · doi-reference
A Novel Method for Phosphorylation of Nucleosides to 5′-Nucleotides
10.1016/s0040-4039(01)89915-9 · ExternalCitation · doi-reference
Recent Trends in Nucleotide Synthesis
10.1021/acs.chemrev.6b00174 · ExternalCitation · doi-reference
ff19SB: Amino-Acid-Specific Protein Backbone Parameters Trained against Quantum Mechanics Energy Surfaces in Solution
10.1021/acs.jctc.9b00591 · ExternalCitation · doi-reference
Synthesis of Nucleoside Triphosphates from 2′-3′-Protected Nucleosides Using Trimetaphosphate
10.1021/acs.orglett.5b03624 · ExternalCitation · doi-reference
Structural Insights into Substrate Selectivity and Activity of Bacterial Polyphosphate Kinases
10.1021/acscatal.8b03151 · ExternalCitation · doi-reference
ATP Recycling with Cell Lysate for Enzyme-Catalyzed Chemical Synthesis, Protein Expression and PCR
10.1021/acschembio.6b00838 · ExternalCitation · doi-reference
A Single Deoxynucleoside Kinase Variant from Drosophila Melanogaster Synthesizes Monophosphates of Nucleosides That Are Components of an Expanded Genetic System
10.1021/acssynbio.6b00228 · ExternalCitation · doi-reference
PROPKA3: Consistent Treatment of Internal and Surface Residues in Empirical pKa Predictions
10.1021/ct100578z · ExternalCitation · doi-reference
Improved Treatment of Ligands and Coupling Effects in Empirical Calculation and Rationalization of pKa Values
10.1021/ct200133y · ExternalCitation · doi-reference
MMPBSA.Py: An Efficient Program for End-State Free Energy Calculations
10.1021/ct300418h · ExternalCitation · doi-reference
Rapid and Efficient Synthesis of Nucleoside 5′-0-(1-Thiotriphosphates), 5′-Triphosphates and 2′,3′-Cyclophosphorothioates Using 2-Chloro-4H-1,3,2-Benzodioxaphosphorin-4-One
10.1021/jo00264a024 · ExternalCitation · doi-reference
Phosphorylation of Adenosine with Trimetaphosphate Under Simulated Prebiotic Conditions
10.1023/a:1016513114799 · ExternalCitation · doi-reference
Prebiotic Synthesis and Triphosphorylation of 3′-Amino-TNA Nucleosides
10.1038/s41557-022-00982-5 · ExternalCitation · doi-reference
The Minimum Energy Required to Build a Cell
10.1038/s41598-024-54303-6 · ExternalCitation · doi-reference
Langevin Stabilization of Molecular Dynamics
10.1063/1.1332996 · ExternalCitation · doi-reference
Comparison of Simple Potential Functions for Simulating Liquid Water
10.1063/1.445869 · ExternalCitation · doi-reference
Molecular Dynamics with Coupling to an External Bath
10.1063/1.448118 · ExternalCitation · doi-reference
Particle Mesh Ewald: An N·log(N) Method for Ewald Sums in Large Systems
10.1063/1.464397 · ExternalCitation · doi-reference
A Comprehensive Electron Wavefunction Analysis Toolbox for Chemists, Multiwfn
10.1063/5.0216272 · ExternalCitation · doi-reference
Polyphosphate-Dependent Synthesis of ATP and ADP by the Family-2 Polyphosphate Kinases in Bacteria
10.1073/pnas.0807563105 · ExternalCitation · doi-reference
Substrate Recognition and Mechanism Revealed by Ligand-Bound Polyphosphate Kinase 2 Structures
10.1073/pnas.1710741115 · ExternalCitation · doi-reference
DNA Synthesis from Diphosphate Substrates by DNA Polymerases
10.1073/pnas.1712193115 · ExternalCitation · doi-reference
Electrostatics of Nanosystems: Application to Microtubules and the Ribosome
10.1073/pnas.181342398 · ExternalCitation · doi-reference
Abiotic Synthesis of Nucleoside 5′-Triphosphates with Nickel Borate and Cyclic Trimetaphosphate (CTMP)
10.1089/ast.2020.2264 · ExternalCitation · doi-reference
Characterization of the Nucleoside Monophosphate Kinase from Thermus Thermophilus Phage P23-45 and Its Application in the Biosynthesis of Deoxynucleoside Triphosphates
10.1093/bbb/zbaf018 · ExternalCitation · doi-reference
A Few Amino Acid Substitutions Can Convert Deoxyribonucleoside Kinase Specificity from Pyrimidines to Purines
10.1093/emboj/21.7.1873 · ExternalCitation · doi-reference
Recent Advances in the Polymerase Chain Reaction
10.1126/science.2047872 · ExternalCitation · doi-reference
A New Subfamily of Polyphosphate Kinase 2 (Class III PPK2) Catalyzes Both Nucleoside Monophosphate Phosphorylation and Nucleoside Diphosphate Phosphorylation
10.1128/aem.03971-13 · ExternalCitation · doi-reference
Hydrolytic Approach for Production of Deoxyribonucleoside-and Ribonucleoside-5′-Monophosphates and Enzymatic Synthesis of Their Polyphosphates
10.1134/s0006297906010123 · ExternalCitation · doi-reference
Polyphosphate - an Ancient Energy Source and Active Metabolic Regulator
10.1186/1475-2859-10-63 · ExternalCitation · doi-reference
Studies of Phosphorylation. III. Selective Phosphorylation of Unprotected Nucleosides
10.1246/bcsj.42.3505 · ExternalCitation · doi-reference
Enzymatic Synthesis of Modified Nucleoside 5′-Monophosphates
10.3390/catal12111401 · ExternalCitation · doi-reference
Polyphosphate Kinase 2 (PPK2) Enzymes: Structure, Function, and Roles in Bacterial Physiology and Virulence
10.3390/ijms23020670 · ExternalCitation · doi-reference
The Exceptional Solubility of Cyclic Trimetaphosphate in the Presence of Mg2+ and Ca2+
10.3390/life16010184 · ExternalCitation · doi-reference
Nucleoside Triphosphates ─ Building Blocks for the Modification of Nucleic Acids
10.3390/molecules171113569 · ExternalCitation · doi-reference
