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References from Generative AI for controllable protein sequence design: A survey. Local targets link to admitted publications; unresolved targets remain external evidence.
10.1016/s0958-1669(02)00328-2
10.1016/s0958-1669(02)00328-2 · 2002 · External reference
10.1146/annurev.bioeng.2.1.339
10.1146/annurev.bioeng.2.1.339 · 2000 · External reference
10.1038/nature19946
10.1038/nature19946 · 2016 · External reference
10.1021/ar960017f
10.1021/ar960017f · 1998 · External reference
10.1039/c6me00083e
10.1039/c6me00083e · 2017 · External reference
10.1021/acs.jctc.7b00125
10.1021/acs.jctc.7b00125 · 2017 · External reference
10.1201/9781136969898
10.1201/9781136969898 · External reference
10.1016/j.cbpa.2021.04.004
10.1016/j.cbpa.2021.04.004 · 2021 · External reference
10.1038/s42256-022-00499-z
10.1038/s42256-022-00499-z · 2022 · External reference
Unresolved reference
2020 · External reference
10.1073/pnas.94.19.10015
10.1073/pnas.94.19.10015 · 1997 · External reference
10.1016/s1359-6446(03)02610-2
10.1016/s1359-6446(03)02610-2 · 2003 · External reference
10.1038/s41587-022-01618-2
10.1038/s41587-022-01618-2 · External reference
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Unresolved reference
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10.1038/s41592-018-0138-4
10.1038/s41592-018-0138-4 · 2018 · External reference
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10.1109/cvpr.2019.00453
10.1109/cvpr.2019.00453 · External reference
10.1109/iccv.2017.244
10.1109/iccv.2017.244 · External reference
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Unresolved reference
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10.1038/s42256-021-00310-5
10.1038/s42256-021-00310-5 · 2021 · External reference
10.1021/acs.jcim.0c01441
10.1021/acs.jcim.0c01441 · 2021 · External reference
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Unresolved reference
2022 · External reference
Unresolved reference
2021 · External reference
10.1126/science.ade2574
10.1126/science.ade2574 · 2023 · External reference
10.1101/2023.09.11.556673
10.1101/2023.09.11.556673 · External reference
10.7551/mitpress/7443.003.0014
10.7551/mitpress/7443.003.0014 · External reference
10.1162/089976602760128018
10.1162/089976602760128018 · 2002 · External reference
Unresolved reference
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Unresolved reference
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Unresolved reference
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10.1021/acscentsci.7b00572
10.1021/acscentsci.7b00572 · 2018 · External reference
10.1021/acs.jctc.3c01057
10.1021/acs.jctc.3c01057 · 2024 · External reference
10.1038/s42256-022-00532-1
10.1038/s42256-022-00532-1 · 2022 · External reference
Unresolved reference
External reference
Unresolved reference
2025 · External reference
10.1093/bioinformatics/btac353
10.1093/bioinformatics/btac353 · 2022 · External reference
10.1609/aaai.v39i1.32030
10.1609/aaai.v39i1.32030 · External reference
10.1162/evco.1993.1.1.1
10.1162/evco.1993.1.1.1 · 1993 · External reference
10.1146/annurev.biophys.37.032807.125832
10.1146/annurev.biophys.37.032807.125832 · 2008 · External reference
10.1038/s41592-019-0496-6
10.1038/s41592-019-0496-6 · 2019 · External reference
Unresolved reference
1998 · External reference
10.1103/physreve.104.014404
10.1103/physreve.104.014404 · 2021 · External reference
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External reference
10.1109/tcbb.2008.124
10.1109/tcbb.2008.124 · 2008 · External reference
Unresolved reference
2023 · External reference
10.1002/pro.4653
10.1002/pro.4653 · 2023 · External reference
Unresolved reference
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Unresolved reference
2021 · External reference
Unresolved reference
External reference
10.52202/075280-3487
10.52202/075280-3487 · External reference
10.1038/s42256-023-00691-9
10.1038/s42256-023-00691-9 · 2023 · External reference
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Unresolved reference
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Unresolved reference
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10.1287/educ.2018.0188
10.1287/educ.2018.0188 · External reference
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10.1021/acssuschemeng.3c02402
10.1021/acssuschemeng.3c02402 · 2023 · External reference
10.1186/s13015-021-00195-4
10.1186/s13015-021-00195-4 · 2021 · External reference
10.1126/science.aba3304
10.1126/science.aba3304 · 2020 · External reference
10.1038/s41467-021-22732-w
10.1038/s41467-021-22732-w · 2021 · External reference
10.1038/s41467-021-25756-4
10.1038/s41467-021-25756-4 · 2021 · External reference
10.1371/journal.pcbi.1008736
10.1371/journal.pcbi.1008736 · 2021 · External reference
10.1038/s42256-023-00787-2
10.1038/s42256-023-00787-2 · 2024 · External reference
Unresolved reference
2020 · External reference
10.1038/s41467-022-32007-7
10.1038/s41467-022-32007-7 · 2022 · External reference
10.1016/j.cels.2023.10.002
10.1016/j.cels.2023.10.002 · 2023 · External reference
10.1038/s41592-025-02636-z
10.1038/s41592-025-02636-z · 2025 · External reference
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Unresolved reference
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10.1101/2025.04.15.649055
10.1101/2025.04.15.649055 · External reference
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10.1109/tpami.2023.3261988
10.1109/tpami.2023.3261988 · 2023 · External reference
Unresolved reference
External reference
10.1038/s44222-023-00114-9
10.1038/s44222-023-00114-9 · 2024 · External reference
10.24963/ijcai.2023/750
10.24963/ijcai.2023/750 · External reference
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External reference
Unresolved reference
External reference
10.1093/nar/gky1049
10.1093/nar/gky1049 · 2019 · External reference
Unresolved reference
2022 · External reference
10.1093/nar/gkac993
10.1093/nar/gkac993 · 2023 · External reference
10.1093/nar/gkaa913
10.1093/nar/gkaa913 · 2021 · External reference
10.1038/s41467-018-04964-5
10.1038/s41467-018-04964-5 · 2018 · External reference
10.1093/bioinformatics/btad506
10.1093/bioinformatics/btad506 · 2023 · External reference
10.1038/s41587-019-0036-z
10.1038/s41587-019-0036-z · 2019 · External reference
10.1038/s41587-021-01156-3
10.1038/s41587-021-01156-3 · 2022 · External reference
10.1093/nar/gky1006
10.1093/nar/gky1006 · 2019 · External reference
10.1002/pro.4205
10.1002/pro.4205 · 2022 · External reference
10.1093/nar/gkaa1025
10.1093/nar/gkaa1025 · 2021 · External reference
Unresolved reference
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Unresolved reference
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10.1101/2022.04.10.487779
10.1101/2022.04.10.487779 · External reference
10.1038/s41586-021-03819-2
10.1038/s41586-021-03819-2 · 2021 · External reference
10.1126/science.add2187
10.1126/science.add2187 · 2022 · External reference
10.1038/s41586-023-06415-8
10.1038/s41586-023-06415-8 · 2023 · External reference
10.1101/2024.09.30.615802
10.1101/2024.09.30.615802 · External reference
10.1126/science.adv0185
10.1126/science.adv0185 · 2025 · External reference
10.1126/science.adr8063
10.1126/science.adr8063 · 2025 · External reference
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Unresolved reference
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10.1101/2023.05.07.539736
10.1101/2023.05.07.539736 · External reference
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External reference
10.1073/pnas.2016239118
10.1073/pnas.2016239118 · 2021 · External reference
Unresolved reference
External reference
10.52202/075280-0449
10.52202/075280-0449 · External reference
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External reference
10.1016/s0969-2126(97)00260-8
10.1016/s0969-2126(97)00260-8 · 1997 · External reference
10.1002/prot.24620
10.1002/prot.24620 · 2014 · External reference
10.52202/075280-2983
10.52202/075280-2983 · External reference
10.1101/2021.02.12.430858
10.1101/2021.02.12.430858 · External reference
10.7554/elife.79854
10.7554/elife.79854 · 2023 · External reference
10.52202/075280-0547
10.52202/075280-0547 · 2023 · External reference
Unresolved reference
External reference
10.1101/2022.04.12.487986
10.1101/2022.04.12.487986 · External reference
10.1038/s41587-023-01763-2
10.1038/s41587-023-01763-2 · 2024 · External reference
Unresolved reference
External reference
10.52202/075280-3220
10.52202/075280-3220 · External reference
10.1038/s42256-025-01011-z
10.1038/s42256-025-01011-z · 2025 · External reference
10.34133/hds.0211
10.34133/hds.0211 · 2024 · External reference
Unresolved reference
External reference
10.52202/079017-2534
10.52202/079017-2534 · External reference
10.1098/rstb.2005.1810
10.1098/rstb.2005.1810 · 2006 · External reference
10.1038/nmeth.2340
10.1038/nmeth.2340 · 2013 · External reference
10.1073/pnas.1012985107
10.1073/pnas.1012985107 · 2010 · External reference
10.1038/s41586-024-07487-w
10.1038/s41586-024-07487-w · 2024 · External reference
10.1093/nar/gki524
10.1093/nar/gki524 · 2005 · External reference
10.1038/s41587-023-01773-0
10.1038/s41587-023-01773-0 · 2024 · External reference
10.1016/s0076-6879(04)83004-0
10.1016/s0076-6879(04)83004-0 · External reference
10.1074/jbc.aw119.008144
10.1074/jbc.aw119.008144 · 2019 · External reference
10.1007/s11047-023-09943-4
10.1007/s11047-023-09943-4 · 2023 · External reference
10.1073/pnas.2017228118
10.1073/pnas.2017228118 · 2021 · External reference
10.1038/s41467-024-45766-2
10.1038/s41467-024-45766-2 · 2024 · External reference
10.1021/acs.jpcb.1c02449
10.1021/acs.jpcb.1c02449 · 2021 · External reference
10.1093/nar/gkab225
10.1093/nar/gkab225 · 2021 · External reference
10.1002/jcc.20291
10.1002/jcc.20291 · 2005 · External reference
10.1038/s41467-023-36994-z
10.1038/s41467-023-36994-z · 2023 · External reference
10.1093/nar/gkw361
10.1093/nar/gkw361 · 2016 · External reference
10.1093/nar/gkn202
10.1093/nar/gkn202 · 2008 · External reference
10.1093/nar/gky473
10.1093/nar/gky473 · 2018 · External reference
10.1038/s41587-024-02214-2
10.1038/s41587-024-02214-2 · 2025 · External reference
Unresolved reference
2021 · External reference
10.1038/nbt0804-1035
10.1038/nbt0804-1035 · 2004 · External reference
10.1038/s41467-022-28865-w
10.1038/s41467-022-28865-w · 2022 · External reference
10.1371/journal.pone.0282689
10.1371/journal.pone.0282689 · 2023 · External reference
10.1371/journal.pone.0020044
10.1371/journal.pone.0020044 · 2011 · External reference
10.1021/pr9009854
10.1021/pr9009854 · 2010 · External reference
10.1371/journal.pone.0019230
10.1371/journal.pone.0019230 · 2011 · External reference
10.1038/s41467-025-66526-w
10.1038/s41467-025-66526-w · External reference
10.3390/biomedicines10071626
10.3390/biomedicines10071626 · 2022 · External reference
Unresolved reference
External reference
10.1101/676825
10.1101/676825 · External reference
10.1093/bioinformatics/btad027
10.1093/bioinformatics/btad027 · 2023 · External reference
10.7554/elife.91415
10.7554/elife.91415 · 2024 · External reference
10.1038/s41467-023-38328-5
10.1038/s41467-023-38328-5 · 2023 · External reference
10.1038/s41586-025-09136-2
10.1038/s41586-025-09136-2 · 2025 · External reference
10.1021/acsomega.4c07682
10.1021/acsomega.4c07682 · 2024 · External reference
10.2174/0109298673264899231206093930
10.2174/0109298673264899231206093930 · 2024 · External reference
Unresolved reference
External reference
10.1039/d1dd00024a
10.1039/d1dd00024a · 2022 · External reference
10.1021/acssynbio.0c00219
10.1021/acssynbio.0c00219 · 2020 · External reference
10.1038/s41557-021-00766-3
10.1038/s41557-021-00766-3 · 2021 · External reference
10.1093/bib/bbab160
10.1093/bib/bbab160 · 2021 · External reference
10.1038/s41551-021-00689-x
10.1038/s41551-021-00689-x · 2021 · External reference
10.1101/2024.03.03.583201
10.1101/2024.03.03.583201 · External reference
10.1038/s41467-023-42434-9
10.1038/s41467-023-42434-9 · 2023 · External reference
10.3389/fmicb.2021.725727
10.3389/fmicb.2021.725727 · 2021 · External reference
10.1126/sciadv.ads8932
10.1126/sciadv.ads8932 · 2025 · External reference
10.1002/advs.202406305
10.1002/advs.202406305 · 2024 · External reference
10.1101/2024.03.03.583201
10.1101/2024.03.03.583201 · External reference
10.1021/acs.jcim.3c01881
10.1021/acs.jcim.3c01881 · 2023 · External reference
10.1016/j.chempr.2018.01.005
10.1016/j.chempr.2018.01.005 · 2018 · External reference
10.52202/079017-3392
10.52202/079017-3392 · 2024 · External reference
10.1038/s41467-024-51933-2
10.1038/s41467-024-51933-2 · 2024 · External reference
10.1093/bib/bbae715
10.1093/bib/bbae715 · 2025 · External reference
10.1093/bib/bbaf376
10.1093/bib/bbaf376 · External reference
10.1145/3388440.3412487
10.1145/3388440.3412487 · External reference
10.1021/acs.jcim.4c01020
10.1021/acs.jcim.4c01020 · 2024 · External reference
10.1093/bioinformatics/btad055
10.1093/bioinformatics/btad055 · 2023 · External reference
10.34133/research.0721
10.34133/research.0721 · External reference
10.1038/s41467-024-50903-y
10.1038/s41467-024-50903-y · 2024 · External reference
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External reference
10.1016/j.cels.2023.10.001
10.1016/j.cels.2023.10.001 · 2023 · External reference
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External reference
Unresolved reference
External reference
10.1038/s41592-021-01100-y
10.1038/s41592-021-01100-y · 2021 · External reference
10.1038/s41586-022-04599-z
10.1038/s41586-022-04599-z · 2022 · External reference
10.1073/pnas.2122355119
10.1073/pnas.2122355119 · 2022 · External reference
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Unresolved reference
External reference
10.1126/science.abn2100
10.1126/science.abn2100 · 2022 · External reference
10.1038/s41586-023-05696-3
10.1038/s41586-023-05696-3 · 2023 · External reference
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External reference
Unresolved reference
External reference
10.1126/science.adr6006
10.1126/science.adr6006 · 2024 · External reference
Unresolved reference
2020 · External reference
10.1145/3472291
10.1145/3472291 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
10.1109/cvpr.2009.5206848
10.1109/cvpr.2009.5206848 · External reference
10.52202/068431-1833
10.52202/068431-1833 · 2022 · External reference
10.18653/v1/w16-2323
10.18653/v1/w16-2323 · External reference
10.1101/2024.11.14.623630
10.1101/2024.11.14.623630 · External reference
Unresolved reference
External reference
10.1145/3561048
10.1145/3561048 · 2023 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
10.52202/068431-2011
10.52202/068431-2011 · 2022 · External reference
Unresolved reference
External reference
10.52202/075280-1516
10.52202/075280-1516 · 2023 · External reference
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Unresolved reference
2021 · External reference
Unresolved reference
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