Contact and support
Need help, have a question, or want to contact the ResearchHub team?
© 2026 ResearchHub. Built for responsible scholarly connection.
Privacy-aware community infrastructureResearch graph
References from A trick of the tail: How electrostatics helps a DNA repair enzyme to localize on nucleosomes. Local targets link to admitted publications; unresolved targets remain external evidence.
Base excision repair
10.1101/cshperspect.a012583 · 2013 · External reference
A nucleotide-flipping mechanism from the structure of human uracil–DNA glycosylase bound to DNA
10.1038/384087a0 · 1996 · External reference
Challenges for base excision repair enzymes: Acquiring access to damaged DNA in chromatin
2019 · External reference
Dynamic action of DNA repair proteins as revealed by single molecule techniques: Seeing is believing
10.1016/j.dnarep.2020.102909 · 2020 · External reference
Protein diffusion along protein and DNA lattices: Role of electrostatics and disordered regions
10.1146/annurev-biophys-111622-091220 · 2023 · External reference
The ‘very moment’ when UDG recognizes a flipped-out uracil base in dsDNA
10.1038/s41598-025-91705-6 · 2025 · External reference
Nucleosome array deformation in chromatin is sustained by bending, twisting and kinking of linker DNA
10.1016/j.jmb.2023.168263 · 2023 · External reference
Nonspecific DNA-protein interaction: Why proteins can diffuse along DNA
10.1103/physrevlett.102.228101 · 2009 · External reference
Electrostatic properties of complexes along a DNA glycosylase damage search pathway
10.1021/bi501011m · 2014 · External reference
Computational study on DNA repair: The roles of electrostatic interactions between uracil-DNA glycosylase (UDG) and DNA
10.3389/fmolb.2021.718587 · 2021 · External reference
DelPhi: A comprehensive suite for DelPhi software and associated resources
10.1186/2046-1682-5-9 · 2012 · External reference
Enzymatic excision of uracil residues in nucleosomes depends on the local DNA structure and dynamics
10.1021/bi3006412 · 2012 · External reference
Obstacles and opportunities for base excision repair in chromatin
10.1016/j.dnarep.2022.103345 · 2022 · External reference
Initiation of base excision repair is modulated by nucleosome occupancy modifying sequences
10.1016/j.dnarep.2025.103852 · 2025 · External reference
Mechanisms of DNA damage recognition by UDG and PARP1 in the nucleosome
10.3390/biom15050649 · 2025 · External reference
10.2139/ssrn.5611937
10.2139/ssrn.5611937 · External reference
Searching DNA via a ‘monkey bar’ mechanism: The significance of disordered tails
10.1016/j.jmb.2009.11.056 · 2010 · External reference
Macromolecular crowding induces compaction and DNA binding in the disordered n-terminal domain of hUNG2
10.1016/j.dnarep.2019.102764 · 2020 · External reference
The N-terminal domain of uracil-DNA glycosylase: Roles for disordered regions
10.1016/j.dnarep.2021.103077 · 2021 · External reference
Nuclear and mitochondrial splice forms of human uracil-DNA glycosylase contain a complex nuclear localisation signal and a strong classical mitochondrial localisation signal, respectively
10.1093/nar/26.20.4611 · 1998 · External reference
Structural insights into the substrate specificity of human granzyme H: The functional roles of a novel RKR motif
10.4049/jimmunol.1101381 · 2012 · External reference
Mechanistic insights into DNA binding by BD1 of the TAF1 tandem bromodomain module
10.1042/bcj20253064 · 2025 · External reference
Principles of nucleosome recognition by chromatin factors and enzymes
10.1016/j.sbi.2021.05.006 · 2021 · External reference
Mapping the electrostatic potential of the nucleosome acidic patch
10.1038/s41598-021-02436-3 · 2021 · External reference
Highly accurate protein structure prediction with AlphaFold
10.1038/s41586-021-03819-2 · 2021 · External reference
EMBOSS: The European molecular biology open software suite
10.1016/s0168-9525(00)02024-2 · 2000 · External reference
Refinement of the theory for extracting cell dielectric properties from dielectrophoresis and electrorotation experiments
10.1063/1.3659282 · 2011 · External reference
Dielectric model for Chinese hamster ovary cells obtained by dielectrophoresis cytometry
10.1063/1.4940432 · 2016 · External reference
Unresolved reference
2023 · External reference
Modeling electrostatics in molecular biology: A tutorial of DelPhi and associated resources [article v1.0]
10.33011/livecoms.1.2.10841 · 2019 · External reference
Improvements to the APBS biomolecular solvation software suite
10.1002/pro.3280 · 2018 · External reference
Interactions of nucleosomes with acidic patch-binding peptides: A combined structural bioinformatics, molecular modeling, fluorescence polarization, and single-molecule FRET study
10.3390/ijms242015194 · 2023 · External reference
Accurate structure prediction of biomolecular interactions with AlphaFold 3
10.1038/s41586-024-07487-w · 2024 · External reference
MassiveFold: Unveiling AlphaFold’s hidden potential with optimized and parallelized massive sampling
10.1038/s43588-024-00714-4 · 2024 · External reference
Scoring function for automated assessment of protein structure template quality
10.1002/prot.20264 · 2004 · External reference
10.1101/2021.10.04.463034
10.1101/2021.10.04.463034 · External reference
Unresolved reference
2015 · External reference
