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References from Comparative molecular dynamics analysis of SARS-CoV-2 RBD interactions with heparin oligosaccharides tethered to a U-shaped DNA origami scaffold. Local targets link to admitted publications; unresolved targets remain external evidence.
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10.3390/cells11071182 · 2022 · External reference
Structural understanding of SARS-CoV-2 virus entry to host cells
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COVID-19, coagulopathy and venous thromboembolism: more questions than answers
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The benefits of heparin use in COVID-19: pleiotropic antiviral activity beyond anticoagulant and anti-inflammatory properties
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Structural characteristics of heparin binding to SARS-CoV-2 spike protein RBD of omicron sub-lineages BA.2.12.1, BA.4 and BA.5
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The binding of heparin to spike glycoprotein inhibits SARS-CoV-2 infection by three mechanisms
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Heparin inhibits cellular invasion by SARS-CoV-2: structural dependence of the interaction of the spike S1 receptor-binding domain with heparin
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N.M.R. AND MOLECULAR-MODELLING STUDIES OF THE SOLUTION CONFORMATION OF HEPARIN
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Crystal structure of SARS-CoV-2 spike receptor-binding domain bound with ACE2
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10.1093/nar/gkz397 · 2019 · External reference
Comparison of the bending behavior of DNA origami nano beam using the nonlinear theory method and steered molecular dynamics simulation
2024 · External reference
Design and simulation of polycationic nano-linkers for connecting polyanions together
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Counterion-dependent mechanisms of DNA origami nanostructure stabilization revealed by atomistic molecular simulation
10.1021/acsnano.9b05650 · 2019 · External reference
Mutations of SARS-CoV-2 RBD may alter its molecular structure to improve its infection efficiency
10.3390/biom11091273 · 2021 · External reference
The Omicron variant BA.2.86.1 of SARS- CoV-2 demonstrates an altered interaction network and dynamic features to enhance the interaction with the hACE2
10.1038/s41598-025-89548-2 · 2025 · External reference
RBD double mutations of SARS-CoV-2 strains increase transmissibility through enhanced interaction between RBD and ACE2 Receptor
10.3390/v14010001 · 2021 · External reference
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Identifying promising druggable binding sites and their flexibility to target the receptor-binding domain of SARS-CoV-2 spike protein
10.1016/j.csbj.2023.03.029 · 2023 · External reference
Heparin-assisted amyloidogenesis uncovered through molecular dynamics simulations
10.1021/acsomega.2c01034 · 2022 · External reference
The study of the binding ability of antimicrobial peptides to spike protein of the coronavirus by docking and molecular dynamics simulation
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Novel neutralizing SARS-CoV-2-specific mAbs offer detection of RBD linear epitopes
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Novel human neutralizing mAbs specific for Spike-RBD of SARS-CoV-2
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Structures and therapeutic potential of anti-RBD human monoclonal antibodies against SARS-CoV-2
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Interactions between heparin and SARS-CoV-2 spike glycoprotein RBD from omicron and other variants
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Doxorubicin-loaded DNA origami nanostructures: stability in vitreous and their uptake and toxicity in ocular cells
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Using heparin molecules to manage COVID‐2019
10.1002/rth2.12353 · 2020 · External reference
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Modeling and investigating the behavior of triangular origami DNA under the influence of laboratory temperature
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