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References from Reproducible Amyloid Typing by Data-Independent Acquisition Mass Spectrometry. Local targets link to admitted publications; unresolved targets remain external evidence.
Clinical proteomics for solid organ tissues
10.1016/j.mcpro.2023.100648 · 2023 · External reference
The clinical impact of proteomics in amyloid typing
10.1016/j.mayocp.2020.12.002 · 2021 · External reference
Tandem mass spectrometry-based amyloid typing using manual microdissection and open-source data processing
10.1093/ajcp/aqab185 · 2022 · External reference
Mass spectrometry-based proteomics as a diagnostic tool when immunoelectron microscopy fails in typing amyloid deposits
10.3109/13506129.2011.574354023 · 2011 · External reference
Shotgun-proteomics-based clinical testing for diagnosis and classification of amyloidosis
10.1002/jms.3264 · 2013 · External reference
Amyloidosis: insights from proteomics
10.1146/annurev-pathol-052016-100200 · 2017 · External reference
Repeatability and reproducibility in proteomic identifications by liquid chromatography-tandem mass spectrometry
10.1021/pr9006365 · 2010 · External reference
Significance analysis of spectral count data in label-free shotgun proteomics
10.1074/mcp.m800203-mcp200 · 2008 · External reference
Comparison of full-scan, data-dependent, and data-independent acquisition modes in liquid chromatography-mass spectrometry based untargeted metabolomics
10.1021/acs.analchem.9b05135 · 2020 · External reference
Technical advances in proteomics: new developments in data-independent acquisition
10.12688/f1000research.7042.1 · 2016 · External reference
A cross-platform toolkit for mass spectrometry and proteomics
10.1038/nbt.2377 · 2012 · External reference
A deeper look into comet–implementation and features
10.1007/s13361-015-1179-x · 2015 · External reference
10.1038/nmeth1113
10.1038/nmeth1113 · External reference
Fast and accurate protein false discovery rates on large-scale proteomics data sets with percolator 3.0
10.1007/s13361-016-1460-7 · 2016 · External reference
Role of spectral counting in quantitative proteomics
10.1586/epr.09.69 · 2010 · External reference
The crux toolkit for analysis of bottom-up tandem mass spectrometry proteomics data
10.1021/acs.jproteome.2c00615 · 2023 · External reference
Ultrasensitivity part I: Michaelian responses and zero-order ultrasensitivity
10.1016/j.tibs.2014.08.003 · 2014 · External reference
Tripping the switch fantastic: how a protein kinase cascade can convert graded inputs into switch-like outputs
10.1016/s0968-0004(96)20026-x · 1996 · External reference
Scipy 1.0: fundamental algorithms for scientific computing in python
10.1038/s41592-019-0686-2 · 2020 · External reference
Acquiring and analyzing data independent acquisition proteomics experiments without spectrum libraries
10.1074/mcp.p119.001913 · 2020 · External reference
Improving precursor selectivity in data-independent acquisition using overlapping windows
10.1007/s13361-018-2122-8 · 2019 · External reference
Acquisition and analysis of DIA-based proteomic data: a comprehensive survey in 2023
10.1016/j.mcpro.2024.100712 · 2024 · External reference
Koina: democratizing machine learning for proteomics research
10.1038/s41467-025-64870-5 · 2025 · External reference
Scikit-learn: machine learning in python
2011 · External reference
Index for rating diagnostic tests
10.1002/1097-0142(1950)3:1<32::aid-cncr2820030106>3.0.co;2-3 · 1950 · External reference
Novel iatrogenic amyloidosis caused by peptide drug liraglutide: a clinical mimic of AL amyloidosis
10.3324/haematol.2018.203000 · 2018 · External reference
Dnaj homolog subfamily B member 9 is a putative autoantigen in fibrillary GN
10.1681/asn.2017050566 · 2018 · External reference