Research graph
References from DIOPT: the DRSC Integrative Ortholog Prediction Tool, 2026 update. Local targets link to admitted publications; unresolved targets remain external evidence.
SFARI Gene 2.0: a community-driven knowledgebase for the autism spectrum disorders (ASDs)
10.1186/2040-2392-4-36 · 2013 · External reference
Harmonizing model organism data in the Alliance of Genome Resources
10.1093/genetics/iyac022 · 2022 · External reference
Updates to the Alliance of Genome Resources central infrastructure
10.1093/genetics/iyae049 · 2024 · External reference
OMA orthology in 2024: improved prokaryote coverage, ancestral and extant GO enrichment, a revamped synteny viewer and more in the OMA Ecosystem
10.1093/nar/gkad1020 · 2024 · External reference
10.1093/nar/gky1151
10.1093/nar/gky1151 · 2019 · External reference
Zebrafish information network, the knowledgebase for Danio rerio research
10.1093/genetics/iyac016 · 2022 · External reference
The HGNC Database in 2008: a resource for the human genome
10.1093/nar/gkm881 · 2008 · External reference
OncoKB: a precision oncology knowledge base
10.1200/po.17.00011 · 2017 · External reference
OrthoMCL-DB: querying a comprehensive multi-species collection of ortholog groups
10.1093/nar/gkj123 · 2006 · External reference
SonicParanoid2: fast, accurate, and comprehensive orthology inference with machine learning and language models
10.1186/s13059-024-03298-4 · 2024 · External reference
Roundup: a multi-genome repository of orthologs and evolutionary distances
10.1093/bioinformatics/btl286 · 2006 · External reference
OrthoFinder: phylogenetic orthology inference for comparative genomics
10.1186/s13059-019-1832-y · 2019 · External reference
Distinguishing homologous from analogous proteins
10.2307/2412448 · 1970 · External reference
PhylomeDB V5: an expanding repository for genome-wide catalogues of annotated gene phylogenies
10.1093/nar/gkab966 · 2022 · External reference
eggNOG v7: phylogeny-based orthology predictions and functional annotations
10.1093/nar/gkaf1249 · 2026 · External reference
SwiftOrtho: a fast, memory-efficient, multiple genome orthology classifier
10.1093/gigascience/giz118 · 2019 · External reference
Gene2Function: an integrated online resource for gene function discovery
10.1534/g3.117.043885 · 2017 · External reference
GLAD: an online database of gene list annotation for Drosophila
10.7150/jgen.12863 · 2015 · External reference
An integrative approach to ortholog prediction for disease-focused and other functional studies
10.1186/1471-2105-12-357 · 2011 · External reference
UP-TORR: online tool for accurate and Up-to-Date annotation of RNAi Reagents
10.1534/genetics.113.151340 · 2013 · External reference
Molecular Interaction Search Tool (MIST): an integrated resource for mining gene and protein interaction data
10.1093/nar/gkx1116 · 2018 · External reference
10.1016/j.csbj.2021.04.021 · 2021 · Admitted local publication
PANGEA: a new gene set enrichment tool for Drosophila and common research organisms
10.1093/nar/gkad331 · 2023 · External reference
HieranoiDB: a database of orthologs inferred by Hieranoid
10.1093/nar/gkw923 · 2017 · External reference
The Rat Genome Database (RGD) facilitates genomic and phenotypic data integration across multiple species for biomedical research
10.1007/s00335-021-09932-x · 2022 · External reference
OrthoList 2: a new comparative genomic analysis of human and Caenorhabditis elegans genes
10.1534/genetics.118.301307 · 2018 · External reference
Systematic phenomics analysis deconvolutes genes mutated in intellectual disability into biologically coherent modules
10.1016/j.ajhg.2015.11.024 · 2016 · External reference
Proteinortho: detection of (co-)orthologs in large-scale analysis
10.1186/1471-2105-12-124 · 2011 · External reference
TreeFam: a curated database of phylogenetic trees of animal gene families
10.1093/nar/gkj118 · 2006 · External reference
A genome-wide CRISPR screen in Anopheles mosquito cells identifies fitness and immune cell function-related genes
10.1038/s41467-025-65304-y · 2025 · External reference
CDD: NCBI's conserved domain database
10.1093/nar/gku1221 · 2015 · External reference
PANTHER version 10: expanded protein families and functions, and analysis tools
10.1093/nar/gkv1194 · 2016 · External reference
OrthoInspector 3.0: open portal for comparative genomics
10.1093/nar/gky1068 · 2019 · External reference
The Quest for Orthologs orthology benchmark service in 2022
10.1093/nar/gkac330 · 2022 · External reference
NCBI orthologs: public resource and scalable method for computing high-precision orthologs across eukaryotic genomes
10.1007/s00239-025-10268-2 · 2025 · External reference
Genes4Epilepsy: an epilepsy gene resource
10.1111/epi.17547 · 2023 · External reference
FlyBase: updates to the Drosophila genes and genomes database
10.1093/genetics/iyad211 · 2024 · External reference
IsoBase: a database of functionally related proteins across PPI networks
10.1093/nar/gkq1234 · 2011 · External reference
Domainoid: domain-oriented orthology inference
10.1186/s12859-019-3137-2 · 2019 · External reference
InParanoiDB 9: ortholog groups for protein domains and full-length proteins
10.1016/j.jmb.2023.168001 · 2023 · External reference
RefSeq and LocusLink: NCBI gene-centered resources
10.1093/nar/29.1.137 · 2001 · External reference
OrthoList: a compendium of C. elegans genes with human orthologs
10.1371/journal.pone.0020085 · 2011 · External reference
The COSMIC Cancer Gene Census: describing genetic dysfunction across all human cancers
10.1038/s41568-018-0060-1 · 2018 · External reference
OrthoDB and BUSCO update: annotation of orthologs with wider sampling of genomes
10.1093/nar/gkae987 · 2025 · External reference
Proteomics. Tissue-based map of the human proteome
10.1126/science.1260419 · 2015 · External reference
UniProt: a worldwide hub of protein knowledge
10.1093/nar/gky1049 · 2019 · External reference
UniProt: the universal protein knowledgebase in 2025
10.1093/nar/gkae1010 · 2025 · External reference
EnsemblCompara GeneTrees: complete, duplication-aware phylogenetic trees in vertebrates
10.1101/gr.073585.107 · 2009 · External reference
In vitro evaluation of CP-62,993, erythromycin, clindamycin, and tetracycline against Chlamydia trachomatis
10.1128/aac.31.5.811 · 1987 · External reference
MARRVEL: integration of human and model organism genetic resources to facilitate functional annotation of the human genome
10.1016/j.ajhg.2017.04.010 · 2017 · External reference
HCOP: the HGNC comparison of orthology predictions search tool
10.1007/s00335-005-0103-2 · 2005 · External reference
Updates to HCOP: the HGNC comparison of orthology predictions tool
10.1093/bib/bbab155 · 2021 · External reference
TSGene 2.0: an updated literature-based knowledgebase for tumor suppressor genes
10.1093/nar/gkv1268 · 2016 · External reference
