Research graph
References from UbiB proteins mediate an ATP ‐dependent decarboxylation step in bacterial ubiquinone biosynthesis. Local targets link to admitted publications; unresolved targets remain external evidence.
Occurrence, biosynthesis and function of isoprenoid quinones
10.1016/j.bbabio.2010.06.007 · 2010 · External reference
On the universal core of bioenergetics
10.1016/j.bbabio.2012.09.005 · 2013 · External reference
Advances in bacterial pathways for the biosynthesis of ubiquinone
10.1016/j.bbabio.2020.148259 · 2020 · External reference
Ubiquinone biosynthesis over the entire O2 range: characterization of a conserved O2‐independent pathway
10.1128/mbio.01319-19 · 2019 · External reference
The UbiX‐UbiD system: the biosynthesis and use of prenylated flavin (prFMN)
10.1016/j.abb.2017.07.014 · 2017 · External reference
A soluble metabolon synthesizes the isoprenoid lipid ubiquinone
10.1016/j.chembiol.2018.12.001 · 2019 · External reference
Yeast and rat Coq3 and Escherichia coli UbiG polypeptides catalyze both O‐methyltransferase steps in coenzyme Q biosynthesis
10.1074/jbc.274.31.21665 · 1999 · External reference
A C‐methyltransferase involved in both ubiquinone and menaquinone biosynthesis: isolation and identification of the Escherichia coli ubiE gene
10.1128/jb.179.5.1748-1754.1997 · 1997 · External reference
Ubiquinone (coenzyme Q) biosynthesis in Escherichia coli: identification of the ubiF gene
10.1111/j.1574-6968.2000.tb09097.x · 2000 · External reference
ubiI, a new gene in Escherichia coli coenzyme Q biosynthesis, is involved in aerobic C5‐hydroxylation
10.1074/jbc.m113.480368 · 2013 · External reference
An organic O donor for biological hydroxylation reactions
10.1073/pnas.2321242121 · 2024 · External reference
Role of the Escherichia coli ubiquinone‐synthesizing UbiUVT pathway in adaptation to changing respiratory conditions
10.1128/mbio.03298-22 · 2023 · External reference
The UbiK protein is an accessory factor necessary for bacterial ubiquinone (UQ) biosynthesis and forms a complex with the UQ biogenesis factor UbiJ
10.1074/jbc.m117.789164 · 2017 · External reference
ubiJ, a new gene required for aerobic growth and proliferation in macrophage, is involved in coenzyme Q biosynthesis in Escherichia coli and Salmonella enterica serovar Typhimurium
10.1128/jb.01065-13 · 2014 · External reference
Towards molecular understanding of the functional role of UbiJ‐UbiK(2) complex in ubiquinone biosynthesis by multiscale molecular modelling studies
10.3390/ijms231810323 · 2022 · External reference
Identification of Escherichia coli ubiB, a gene required for the first monooxygenase step in ubiquinone biosynthesis
10.1128/jb.182.18.5139-5146.2000 · 2000 · External reference
Mitochondrial ADCK3 employs an atypical protein kinase‐like fold to enable coenzyme Q biosynthesis
10.1016/j.molcel.2014.11.002 · 2015 · External reference
Conserved lipid and small‐molecule modulation of COQ8 reveals regulation of the ancient kinase‐like UbiB family
10.1016/j.chembiol.2017.11.001 · 2018 · External reference
A new member of the family of di‐iron carboxylate proteins. Coq7 (clk‐1), a membrane‐bound hydroxylase involved in ubiquinone biosynthesis
10.1074/jbc.c100346200 · 2001 · External reference
Evolution of ubiquinone biosynthesis: multiple proteobacterial enzymes with various regioselectivities to catalyze three contiguous aromatic hydroxylation reactions
10.1128/msystems.00091-16 · 2016 · External reference
UbiN, a novel Rhodobacter capsulatus decarboxylative hydroxylase involved in aerobic ubiquinone biosynthesis
10.1002/2211-5463.13707 · 2023 · External reference
The biosynthetic pathway of ubiquinone contributes to pathogenicity of Francisella novicida
10.1128/jb.00400-21 · 2021 · External reference
Biosynthesis of coenzyme Q in the Phytopathogen xanthomonas campestris via a yeast‐like pathway
10.1094/mpmi-07-18-0183-r · 2019 · External reference
Dynamic quinone repertoire accompanied the diversification of energy metabolism in Pseudomonadota
10.1093/ismejo/wrae253 · 2025 · External reference
A novel quinone biosynthetic pathway illuminates the evolution of aerobic metabolism
10.1073/pnas.2421994122 · 2025 · External reference
UbiX is a flavin prenyltransferase required for bacterial ubiquinone biosynthesis
10.1038/nature14559 · 2015 · External reference
UbiD domain dynamics underpins aromatic decarboxylation
10.1038/s41467-021-25278-z · 2021 · External reference
The role of UbiX in Escherichia coli coenzyme Q biosynthesis
10.1016/j.abb.2007.08.009 · 2007 · External reference
Ribosome‐targeting antibiotics: modes of action, mechanisms of resistance, and implications for drug design
10.1146/annurev-biochem-062917-011942 · 2018 · External reference
UbiB proteins regulate cellular CoQ distribution in Saccharomyces cerevisiae
10.1038/s41467-021-25084-7 · 2021 · External reference
Visualizing the enzyme mechanism of mevalonate diphosphate decarboxylase
10.1038/s41467-020-17733-0 · 2020 · External reference
Three hydroxylations incorporating molecular oxygen in the aerobic biosynthesis of ubiquinone in Escherichia coli
10.1021/bi00615a023 · 1978 · External reference
Oxygen‐dependent coproporphyrinogen III oxidase (HemF) from Escherichia coli is stimulated by manganese
10.1074/jbc.m308553200 · 2003 · External reference
Gene disruption in Escherichia coli: TcR and KmR cassettes with the option of Flp‐catalyzed excision of the antibiotic‐resistance determinant
10.1016/0378-1119(95)00193-a · 1995 · External reference
Clustal omega, accurate alignment of very large numbers of sequences
10.1007/978-1-62703-646-7_6 · 2014 · External reference
A synthesis of bacterial and archaeal phenotypic trait data
10.1038/s41597-020-0497-4 · 2020 · External reference
Influenza a virus induces PI4P production at the endoplasmic reticulum in an ATG16L1‐dependent manner to promote the egress of viral ribonucleoproteins
10.1371/journal.pbio.3002958 · 2025 · External reference
DIA‐NN: neural networks and interference correction enable deep proteome coverage in high throughput
10.1038/s41592-019-0638-x · 2020 · External reference
DIAgui: a shiny application to process the output from DIA‐NN
10.1093/bioadv/vbae001 · 2024 · External reference
