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References from Apoplast multi‐omics profiling during fungal infection uncovers new players of basal and early induced immunity in <i>Arabidopsis thaliana</i>. Local targets link to admitted publications; unresolved targets remain external evidence.
Mechanisms and strategies of plant defense against Botrytis cinerea
10.1080/07388551.2016.1271767 · 2017 · External reference
Bchex virulence gene of Botrytis cinerea: characterization and functional analysis
10.1007/s10327-011-0311-4 · 2011 · External reference
Transcriptome and metabolome reprogramming in Vitis vinifera cv. Trincadeira berries upon infection with Botrytis cinerea
10.1093/jxb/eru517 · 2015 · External reference
Evaluation of optimized tube‐gel methods of sample preparation for large‐scale plant proteomics
10.3390/proteomes6010006 · 2018 · External reference
Proteome catalog of Zymoseptoria tritici captured during pathogenesis in wheat
10.1016/j.fgb.2015.04.018 · 2015 · External reference
The Botrytis cinerea Crh1 transglycosylase is a cytoplasmic effector triggering plant cell death and defense response
10.1038/s41467-021-22436-1 · 2021 · External reference
Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: Identification by mass spectrometry and bioinformatics
10.1002/pmic.200400882 · 2005 · External reference
Plants send small RNAs in extracellular vesicles to fungal pathogen to silence virulence genes
10.1126/science.aar4142 · 2018 · External reference
Arabidopsis AZI1 family proteins mediate signal mobilization for systemic defence priming
10.1038/ncomms8658 · 2015 · External reference
A cross‐platform toolkit for mass spectrometry and proteomics
10.1038/nbt.2377 · 2012 · External reference
Wounding of Arabidopsis leaves causes a powerful but transient protection against Botrytis infection
10.1111/j.1365-313x.2008.03540.x · 2008 · External reference
Cuticular defects lead to full immunity to a major plant pathogen
10.1111/j.1365-313x.2006.03017.x · 2007 · External reference
RanGTPase links nucleo‐cytoplasmic transport to the recruitment of cargoes into small extracellular vesicles
10.1007/s00018-022-04422-y · 2022 · External reference
Proteomic snapshot of pattern triggered immunity in the Arabidopsis leaf apoplast
10.1111/tpj.70498 · 2025 · External reference
Starving the enemy: how plant and microbe compete for sugar on the border
10.3389/fpls.2023.1230254 · 2023 · External reference
Genetic immune modulation of Ran GTPase against different microbial pathogens
10.2741/1488 · 2004 · External reference
Open source system for analyzing, validating, and storing protein identification data
10.1021/pr049882h · 2004 · External reference
Short oligogalacturonides induce pathogen resistance‐associated gene expression in Arabidopsis thaliana
10.1186/s12870-016-0959-1 · 2017 · External reference
Unravelling the interplay of nitrogen nutrition and the Botrytis cinerea pectin lyase BcPNL1 in modulating Arabidopsis thaliana susceptibility
10.1038/s42003-025-07642-7 · 2025 · External reference
Extracellular vesicles of the plant pathogen Botrytis cinerea
10.3390/jof9040495 · 2023 · External reference
AtPME17 is a functional Arabidopsis thaliana pectin methylesterase regulated by its PRO region that triggers PME activity in the resistance to Botrytis cinerea
10.1111/mpp.13002 · 2020 · External reference
Inhibitory effects of Arabidopsis EARLI1 against Botrytis cinerea and Bradysia difformis
10.1007/s11240-012-0164-3 · 2012 · External reference
Sirius 4: a rapid tool for turning tandem mass spectra into metabolite structure information
10.1038/s41592-019-0344-8 · 2019 · External reference
Searching molecular structure databases with tandem mass spectra using CSI:FingerID
10.1073/pnas.1509788112 · 2015 · External reference
Plant secondary metabolites as defenses, regulators, and primary metabolites: the blurred functional trichotomy
10.1104/pp.20.00433 · 2020 · External reference
The Botrytis cinerea early secretome
10.1002/pmic.201000037 · 2010 · External reference
The apoplast: a key player in plant survival
10.3390/antiox9070604 · 2020 · External reference
Metabolite profiling in Arabidopsis
2006 · External reference
Quality control for plant metabolomics: reporting MSI‐compliant studies
10.1111/j.1365-313x.2007.03387.x · 2008 · External reference
Metabolomics by gas chromatography‐mass spectrometry: the combination of targeted and untargeted profiling
2017 · External reference
Verticillium longisporum infection affects the leaf apoplastic proteome, metabolome, and cell wall properties in Arabidopsis thaliana
10.1371/journal.pone.0031435 · 2012 · External reference
Toward the apoplast metabolome: establishing a leaf apoplast collection approach suitable for metabolomics analysis
10.1016/j.plaphy.2024.109080 · 2024 · External reference
BcSpl1, a cerato‐platanin family protein, contributes to Botrytis cinerea virulence and elicits the hypersensitive response in the host
10.1111/j.1469-8137.2011.03802.x · 2011 · External reference
BcIEB1, a Botrytis cinerea secreted protein, elicits a defense response in plants
10.1016/j.plantsci.2016.06.009 · 2016 · External reference
A 25‐residue peptide from Botrytis cinerea xylanase bcxyn11a elicits plant defenses
10.3389/fpls.2019.00474 · 2019 · External reference
The hypersensitive response facilitates plant infection by the necrotrophic pathogen Botrytis cinerea
10.1016/s0960-9822(00)00560-1 · 2000 · External reference
Lolium perenne apoplast metabolomics for identification of novel metabolites produced by the symbiotic fungus Epichloë festucae
10.1111/nph.16528 · 2020 · External reference
Understanding the plant‐pathogen interactions in the context of proteomics‐generated apoplastic proteins inventory
10.3389/fpls.2015.00352 · 2015 · External reference
Cell wall‐localized BETA‐XYLOSIDASE4 contributes to immunity of Arabidopsis against Botrytis cinerea
10.1093/plphys/kiac165 · 2022 · External reference
An aspartic proteinase gene family in the filamentous fungus Botrytis cinerea contains members with novel features
10.1099/mic.0.27058-0 · 2004 · External reference
RNA‐binding proteins contribute to small RNA loading in plant extracellular vesicles
10.1038/s41477-021-00863-8 · 2021 · External reference
Apoplast metabolomics profiling reveals nitrogen‐dependent modulation of plant–pathogen interactions
10.1111/mpp.70110 · 2025 · External reference
ms2query: reliable and scalable MS2 mass spectra‐based analogue search
10.1038/s41467-023-37446-4 · 2023 · External reference
Laser nephelometry applied in an automated microplate system to study filamentous fungus growth
10.2144/000113399 · 2010 · External reference
Proteasomes accumulate in the plant apoplast where they participate in microbe‐associated molecular pattern (MAMP)‐triggered pathogen defense
10.1038/s41467-025-56594-3 · 2025 · External reference
Functional analysis of Botrytis cinerea pectin methylesterase genes by PCR‐based targeted mutagenesis: Bcpme1 and Bcpme2 are dispensable for virulence of strain B05.10
10.1111/j.1364-3703.2005.00312.x · 2005 · External reference
A rice gene encoding glycosyl hydrolase plays contrasting roles in immunity depending on the type of pathogens
10.1111/mpp.13167 · 2022 · External reference
NPClassifier: a deep neural network‐based structural classification tool for natural products
10.1021/acs.jnatprod.1c00399 · 2021 · External reference
In‐depth insight into in vivo apoplastic secretome of rice‐Magnaporthe oryzae interaction
10.1016/j.jprot.2012.10.029 · 2013 · External reference
X!TandemPipeline: a tool to manage sequence redundancy for protein inference and phosphosite identification
10.1021/acs.jproteome.6b00632 · 2017 · External reference
Multiple knockout mutants reveal a high redundancy of phytotoxic compounds contributing to necrotrophic pathogenesis of Botrytis cinerea
10.1371/journal.ppat.1010367 · 2022 · External reference
Plasmalemma localisation of DOUBLE HYBRID PROLINE‐RICH PROTEIN 1 and its function in systemic acquired resistance of Arabidopsis thaliana
10.1071/fp13314 · 2014 · External reference
1‐Methyltryptophan treatment increases defense‐related proteins in the apoplast of tomato plants
10.1021/acs.jproteome.0c00498 · 2021 · External reference
Impaired cuticle functionality and robust resistance to Botrytis cinerea in Arabidopsis thaliana plants with altered homogalacturonan integrity are dependent on the Class III peroxidase AtPRX71
10.3389/fpls.2021.696955 · 2021 · External reference
Arabidopsis SBT5.2 and SBT1.7 subtilases mediate C‐terminal cleavage of flg22 epitope from bacterial flagellin
10.1038/s41467-024-48108-4 · 2024 · External reference
Gas5A, a putative glucanosyltransferase from Botrytis, functions as cell death inducing protein in plants
10.1016/j.plantsci.2026.113134 · 2026 · External reference
One step forward for reducing false positive and false negative compound identifications from mass spectrometry metabolomics data: new algorithms for constructing extracted ion chromatograms and detecting chromatographic peaks
10.1021/acs.analchem.7b00947 · 2017 · External reference
Immune cell states: critical building blocks of the plant immune system
10.1016/j.chom.2025.06.016 · 2025 · External reference
A rare PRIMER cell state in plant immunity
10.1038/s41586-024-08383-z · 2025 · External reference
Early changes in apoplast composition associated with defence and disease in interactions between Phaseolus vulgaris and the halo blight pathogen Pseudomonas syringae Pv. phaseolicola
10.1111/pce.12770 · 2016 · External reference
The infiltration‐centrifugation technique for extraction of apoplastic fluid from plant leaves using Phaseolus vulgaris as an example
2014 · External reference
The PRIDE database at 20 years: 2025 update
10.1093/nar/gkae1011 · 2025 · External reference
Invasion of the four kingdoms: the parasite journey across plant and non‐plant hosts
10.1111/brv.13169 · 2025 · External reference
Ran‐GTP/‐GDP‐dependent nuclear accumulation of nonexpressor of pathogenesis‐related genes1 and TGACG‐binding factor2 controls salicylic acid‐induced leaf senescence
10.1093/plphys/kiac164 · 2022 · External reference
Hormonal modulation of plant immunity
10.1146/annurev-cellbio-092910-154055 · 2012 · External reference
The Arabidopsis neutral amino acid transporter UmamiT20 confers Botrytis cinerea susceptibility
2025 · External reference
Evaluation of the antimicrobial activities of plant oxylipins supports their involvement in defense against pathogens
10.1104/pp.105.066274 · 2005 · External reference
Detoxification of α‐tomatine by Botrytis cinerea
10.1006/pmpp.1998.0142 · 1998 · External reference
Temporal quantitative changes in the resistant and susceptible wheat leaf apoplastic proteome during infection by wheat leaf rust (Puccinia triticina)
10.3389/fpls.2019.01291 · 2019 · External reference
Proteome adaptations under contrasting soil phosphate regimes of Rhizophagus irregularis engaged in a common mycorrhizal network
10.1016/j.fgb.2021.103517 · 2021 · External reference
Sulphur and nitrogen regulation of the protease‐encoding ACP1 gene in the fungus Botrytis cinerea: correlation with a phospholipase D activity
10.1099/mic.0.2007/012005-0 · 2008 · External reference
HASTY‐mediated miRNA dynamics modulate nitrogen starvation‐induced leaf senescence in Arabidopsis
10.1038/s41467-024-52339-w · 2024 · External reference
Berberine bridge enzyme‐like oxidases orchestrate homeostasis and signaling of oligogalacturonides in defense and upon mechanical damage
10.1111/tpj.70150 · 2025 · External reference
Nitrate reductase‐ and nitric oxide‐dependent activation of sinapoylglucose:malate sinapoyltransferase in leaves of Arabidopsis thaliana
10.1093/pcp/pcs104 · 2012 · External reference
Use of intercellular washing fluid to investigate the secreted proteome of the rice‐Magnaporthe interaction
10.1007/s10265-012-0473-y · 2012 · External reference
The Arabidopsis small G‐protein AtRAN1 is a positive regulator in chitin‐induced stomatal closure and disease resistance
10.1111/mpp.13010 · 2021 · External reference
Plant nitrogen supply affects the Botrytis cinerea infection process and modulates known and novel virulence factors
10.1111/mpp.12984 · 2020 · External reference
Proteolytic Processing of a Precursor Protein for a Growth‐Promoting Peptide by a Subtilisin Serine Protease in Arabidopsis
10.1111/j.1365-313x.2008.03598.x · 2008 · External reference
Rice apoplastic CBM1‐interacting protein counters blast pathogen invasion by binding conserved carbohydrate binding module 1 motif of fungal proteins
10.1371/journal.ppat.1010792 · 2022 · External reference
The endopolygalacturonase gene Bcpg1 is required to full virulence of Botrytis cinerea
10.1094/mpmi.1998.11.10.1009 · 1998 · External reference
MassChroQ: a versatile tool for mass spectrometry quantification
10.1002/pmic.201100120 · 2011 · External reference
Many shades of grey in Botrytis–host plant interactions
10.1016/j.tplants.2018.03.016 · 2018 · External reference
The multiple facets of plant–fungal interactions revealed through plant and fungal secretomics
10.3389/fpls.2019.01626 · 2020 · External reference
Oligogalacturonide production upon Arabidopsis thaliana‐Botrytis cinerea interaction
10.1073/pnas.1900317116 · 2019 · External reference
10.1186/s42483‐024‐00275‐4
10.1186/s42483‐024‐00275‐4 · External reference
Bidirectional cross‐kingdom RNAi and fungal uptake of external RNAs confer plant protection
10.1038/nplants.2016.151 · 2016 · External reference
Plant mRNAs move into a fungal pathogen via extracellular vesicles to reduce infection
10.1016/j.chom.2023.11.020 · 2024 · External reference
Overexpression of a small GTP‐binding protein Ran1 in Arabidopsis leads to promoted elongation growth and enhanced disease resistance against P. syringae DC3000
10.1111/tpj.15445 · 2021 · External reference
Amino acid metabolism and transporters in plant−pathogen interactions: mechanisms and implications
10.1111/pce.15594 · 2025 · External reference
Apoplastic metabolomics reveals sugars as mesophyll messengers regulating guard cell ion transport under red light
10.1038/s41477-025-02078-7 · 2025 · External reference
Identification of an apoplastic protein involved in the initial phase of salt stress response in rice root by two‐dimensional electrophoresis
10.1104/pp.108.131144 · 2009 · External reference
BcXYG1, a secreted xyloglucanase from Botrytis cinerea, triggers both cell death and plant immune responses
10.1104/pp.17.00375 · 2017 · External reference