References

Genomic clues to the ancestral flowering plant

10.1126/science.1248709 · 2013 · External reference

Soil sample pooling generates no consistent inference bias: a meta‐analysis of 71 plant–soil feedback experiments

10.1111/nph.17455 · 2021 · External reference

Spatial vs. temporal controls over soil fungal community similarity at continental and global scales

10.1038/s41396-019-0420-1 · 2019 · External reference

Disentangling plant‐ and environment‐mediated drivers of active rhizosphere bacterial community dynamics during short‐term drought

10.1038/s41467-024-50463-1 · 2024 · External reference

Unresolved reference

External reference

Plant–soil feedbacks and mycorrhizal type influence temperate forest population dynamics

10.1126/science.aai8212 · 2017 · External reference

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

10.1038/s41587-019-0209-9 · 2019 · External reference

Lineage overwhelms environmental conditions in determining rhizosphere bacterial community structure in a cosmopolitan invasive plant

10.1038/s41467-017-00626-0 · 2017 · External reference

DADA2: high‐resolution sample inference from Illumina amplicon data

10.1038/nmeth.3869 · 2016 · External reference

Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies

10.1890/13-0133.1 · 2014 · External reference

Priority effects in microbiome assembly

10.1038/s41579-021-00604-w · 2022 · External reference

A global atlas of the dominant bacteria found in soil

10.1126/science.aap9516 · 2018 · External reference

Soil abiotic variables are more important than Salicaceae phylogeny or habitat specialization in determining soil microbial community structure

10.1111/mec.14576 · 2018 · External reference

Effects of dispersal and selection on stochastic assembly in microbial communities

10.1038/ismej.2016.96 · 2017 · External reference

Assembly and ecological function of the root microbiome across angiosperm plant species

10.1073/pnas.1717617115 · 2018 · External reference

Fungal community assembly in drought‐stressed sorghum shows stochasticity, selection, and universal ecological dynamics

10.1038/s41467-019-13913-9 · 2020 · External reference

Latitudinal variation in the diversity and composition of various organisms associated with an exotic plant: the role of climate and plant invasion

10.1111/nph.17479 · 2021 · External reference

Assembly and seasonality of core phyllosphere microbiota on perennial biofuel crops

10.1038/s41467-019-11974-4 · 2019 · External reference

Plant invasion affects litter decomposition differently in native and invasive plant conditioned soils

10.1007/s11104-024-07078-8 · 2025 · External reference

Root‐associated fungal communities are influenced more by soils than by plant–host root traits in a Chinese tropical forest

10.1111/nph.18821 · 2023 · External reference

iNEXT: an R package for rarefaction and extrapolation of species diversity (Hill numbers)

10.1111/2041-210x.12613 · 2016 · External reference

New primers to amplify the fungal ITS2 region – evaluation by 454‐sequencing of artificial and natural communities

10.1111/j.1574-6941.2012.01437.x · 2012 · External reference

The mechanism effects of root exudate on microbial community of rhizosphere soil of tree, shrub, and grass in forest ecosystem under N deposition

10.1038/s43705-023-00322-9 · 2023 · External reference

Neighbours rewire plant–soil feedback patterns via reshaping root microbiomes

10.1038/s41477-026-02338-0 · 2026 · External reference

glmm.hp: an R package for computing individual effect of predictors in generalized linear mixed models

10.1093/jpe/rtac096 · 2022 · External reference

Plant microbiomes feel the heat

10.1126/science.adw3659 · 2025 · External reference

Plant diversity increases soil microbial activity and soil carbon storage

10.1038/ncomms7707 · 2015 · External reference

Predicting the structure of soil communities from plant community taxonomy, phylogeny, and traits

10.1038/s41396-018-0089-x · 2018 · External reference

Refocusing the microbial rare biosphere concept through a functional lens

10.1016/j.tree.2024.06.005 · 2024 · External reference

Negative plant–soil feedback predicts tree‐species relative abundance in a tropical forest

10.1038/nature09273 · 2010 · External reference

Methods for normalizing microbiome data: an ecological perspective

10.1111/2041-210x.13115 · 2018 · External reference

IQ‐TREE 2: new models and efficient methods for phylogenetic inference in the genomic era

10.1093/molbev/msaa015 · 2020 · External reference

Invasive plants and their root traits are linked to the homogenization of soil microbial communities across the United States

10.1073/pnas.2418632121 · 2024 · External reference

Unresolved reference

External reference

The limits to leaf and root plasticity: what is so special about specific root length?

10.1111/nph.13438 · 2015 · External reference

Range‐expansion effects on the belowground plant microbiome

10.1038/s41559-019-0828-z · 2019 · External reference

Roots shaping their microbiome: global hotspots for microbial activity

10.1146/annurev-phyto-082712-102342 · 2015 · External reference

Plant size, latitude, and phylogeny explain within‐population variability in herbivory

10.1126/science.adh8830 · 2023 · External reference

The positive effect of plant diversity on soil carbon depends on climate

10.1038/s41467-023-42340-0 · 2023 · External reference

Interspecific variation in conspecific negative density dependence can make species less likely to coexist

10.1111/ele.13135 · 2018 · External reference

Root traits explain rhizosphere fungal community composition among temperate grassland plant species

10.1111/nph.16976 · 2021 · External reference

Hemispheric asymmetry in ocean change and the productivity of ecosystem sentinels

10.1126/science.abf1772 · 2021 · External reference

Global diversity and geography of soil fungi

10.1126/science.1256688 · 2014 · External reference

Plant–soil feedback and the maintenance of diversity in Mediterranean‐climate shrublands

10.1126/science.aai8291 · 2017 · External reference

Root microbiota assembly and adaptive differentiation among European Arabidopsis populations

10.1038/s41559-019-1063-3 · 2020 · External reference

Plant–microbiome interactions under a changing world: responses, consequences and perspectives

10.1111/nph.18016 · 2022 · External reference

Above‐ and belowground fungal biodiversity of Populus trees on a continental scale

10.1038/s41564-023-01514-8 · 2023 · External reference

Functional rarity: the ecology of outliers

10.1016/j.tree.2017.02.002 · 2017 · External reference

Biotic interactions drive ecosystem responses to exotic plant invaders

10.1126/science.aba2225 · 2020 · External reference

Climate‐driven divergence in plant–microbiome interactions generates range‐wide variation in bud break phenology

10.1038/s42003-021-02244-5 · 2021 · External reference

Plant evolution overwhelms geographical origin in shaping rhizosphere fungi across latitudes

10.1111/gcb.15683 · 2021 · External reference

Plant root exudation under drought: implications for ecosystem functioning

10.1111/nph.16223 · 2020 · External reference

Phylogenetic imprint of woody plants on the soil mycobiome in natural mountain forests of eastern China

10.1038/s41396-018-0303-x · 2019 · External reference

Plant and fungal species interactions differ between aboveground and belowground habitats in mountain forests of eastern China

10.1007/s11427-022-2174-3 · 2023 · External reference

Evolutionary conservation of a core root microbiome across plant phyla along a tropical soil chronosequence

10.1038/s41467-017-00262-8 · 2017 · External reference

Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly

10.1038/s41564-018-0129-3 · 2018 · External reference

Meta‐analysis of the impacts of global change factors on soil microbial diversity and functionality

10.1038/s41467-020-16881-7 · 2020 · External reference