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References from The abTEM code: transmission electron microscopy from first principles. Local targets link to admitted publications; unresolved targets remain external evidence.
Charge defects glowing in the dark.
10.1016/j.ultramic.2006.10.001 · 2007 · External reference
Experimental analysis of charge redistribution due to chemical bonding by high-resolution transmission electron microscopy.
10.1038/nmat2941 · 2011 · External reference
Simulation of bonding effects in HRTEM images of light element materials.
10.3762/bjnano.2.45 · 2011 · External reference
Measurement of atomic electric fields and charge densities from average momentum transfers using scanning transmission electron microscopy.
10.1016/j.ultramic.2016.05.004 · 2017 · External reference
Quantitative Agreement between Electron-Optical Phase Images of WSe2 and Simulations Based on Electrostatic Potentials that Include Bonding Effects.
10.1103/physrevlett.118.086101 · 2017 · External reference
Efficient first principles simulation of electron scattering factors for transmission electron microscopy.
10.1016/j.ultramic.2018.11.002 · 2019 · External reference
abTEM: ab Initio Transmission Electron Microscopy Image Simulation.
10.1017/s1431927620014701 · 2020 · External reference
Advanced Computing in Electron Microscopy.
10.1007/978-1-4419-6533-2 · External reference
Determination of Core Structure Periodicity and Point Defect Density along Dislocations.
2002 · External reference
STEMSIM—a New Software Tool for Simulation of STEM HAADF Z-Contrast Imaging.
10.1007/978-1-4020-8615-1_36 · 2008 · External reference
FDES, a GPU-based multislice algorithm with increased efficiency of the computation of the projected potential.
10.1016/j.ultramic.2015.07.005 · 2015 · External reference
Modelling the inelastic scattering of fast electrons.
10.1016/j.ultramic.2014.10.011 · 2015 · External reference
MULTEM: A new multislice program to perform accurate and fast electron diffraction and imaging simulations using Graphics Processing Units with CUDA.
10.1016/j.ultramic.2015.04.016 · 2015 · External reference
EMsoft: open source software for electron diffraction/image simulations.
10.1017/s143192761700174x · 2017 · External reference
STEMsalabim: A high-performance computing cluster friendly code for scanning transmission electron microscopy image simulations of thin specimens.
10.1016/j.ultramic.2017.03.010 · 2017 · External reference
A streaming multi-GPU implementation of image simulation algorithms for scanning transmission electron microscopy.
10.1186/s40679-017-0048-z · 2017 · External reference
Dr. Probe: A software for high-resolution STEM image simulation.
10.1016/j.ultramic.2018.06.003 · 2018 · External reference
STEMcl-A multi-GPU multislice algorithm for simulation of large structure and imaging parameter series.
10.1016/j.ultramic.2018.02.004 · 2018 · External reference
A Python Based Open-source Multislice Simulation Package for Transmission Electron Microscopy.
10.1017/s1431927620023326 · 2020 · External reference
A fast image simulation algorithm for scanning transmission electron microscopy.
10.1186/s40679-017-0046-1 · 2017 · External reference
jacobjma/abTEM 1.0.0beta14.
2021 · External reference
ab initio description of bonding for transmission electron microscopy.
2020 · External reference
The Design and implementation of FFTW3.
10.1109/jproc.2004.840301 · 2005 · External reference
Relativistic Hartree-Fock X-ray and electron scattering factors.
10.1107/s0567739468000756 · 1968 · External reference
An accurate parameterization for scattering factors, electron densities and electrostatic potentials for neutral atoms that obey all physical constraints.
10.1107/s205327331401643x · 2014 · External reference
Computation of absorptive form factors for high-energy electron diffraction.
10.1107/s0108767391004804 · 1991 · External reference
Robust Parameterization of Elastic and Absorptive Electron Atomic Scattering Factors.
10.1107/s0108767395014371 · 1996 · External reference
The Pseudopotential Approximation in Electronic Structure Theory.
10.1002/cphc.201100387 · 2011 · External reference
Projector augmented-wave method.
10.1103/physrevb.50.17953 · 1994 · External reference
Real-space grid implementation of the projector augmented wave method.
10.1103/physrevb.71.035109 · 2005 · External reference
Electronic structure calculations with GPAW: a real-space implementation of the projector augmented-wave method.
10.1088/0953-8984/22/25/253202 · 2010 · External reference
Multislice Electron Scattering Simulations for Angstrom-scale Magnetic Measurements with 4D-STEM.
10.1017/s1431927620013136 · 2020 · External reference
Double Exponential Formulas for Numerical Integration.
10.2977/prims/1195192451 · 1973 · External reference
Absorptive form factors for high-energy electron diffraction.
10.1107/s0108767389011906 · 1990 · External reference
Position and momentum mapping of vibrations in graphene nanostructures.
10.1038/s41586-019-1477-8 · 2019 · External reference
Single-atom vibrational spectroscopy in the scanning transmission electron microscope.
10.1126/science.aba1136 · 2020 · External reference
Efficient and Versatile Model for Vibrational STEM-EELS.
10.1103/physrevlett.124.025501 · 2020 · External reference
Influence of plasmon excitations on atomic-resolution quantitative 4D scanning transmission electron microscopy.
10.1038/s41598-020-74434-w · 2020 · External reference
An inelastic multislice simulation method incorporating plasmon energy losses.
10.1016/j.ultramic.2019.112816 · 2019 · External reference
Linear-scaling algorithm for rapid computation of inelastic transitions in the presence of multiple electron scattering.
10.1103/physrevresearch.1.033186 · 2019 · External reference
Phonon Spectroscopy at Atomic Resolution.
10.1103/physrevlett.122.016103 · 2019 · External reference
Is the frozen phonon model adequate to describe inelastic phonon scattering?
10.1016/j.ultramic.2009.01.001 · 2009 · External reference
Thermal diffuse scattering in transmission electron microscopy.
10.1016/j.ultramic.2011.09.017 · 2011 · External reference
Using molecular dynamics for multislice TEM simulation of thermal diffuse scattering in AlGaN.
10.1016/j.ultramic.2018.03.025 · 2018 · External reference
The atomic simulation environment-a Python library for working with atoms.
10.1088/1361-648x/aa680e · 2017 · External reference
Fast Parallel Algorithms for Short-Range Molecular Dynamics.
10.1006/jcph.1995.1039 · 1995 · External reference
hyperspy: Release v1.6.1
10.5281/zenodo.4294676 · 2020 · External reference
py4dstem/py4DSTEM: DOI release
10.5281/zenodo.3333960 · 2019 · External reference
Numba: A LLVM-Based Python JIT Compiler.
10.1145/2833157.2833162 · 2015 · External reference
CuPy: A NumPy- Compatible Library for NVIDIA GPU Calculations.
2017 · External reference
Binder 2.0 - Reproducible, interactive, sharable environments for science at scale.
10.25080/majora-4af1f417-011 · 2018 · External reference
Direct Imaging of Charge Redistribution due to Bonding at Atomic Resolution via Electron Ptychography.
2019 · External reference
Electron ptychography of 2D materials to deep sub-ångström resolution.
10.1038/s41586-018-0298-5 · 2018 · External reference
Phase contrast STEM for thin samples: Integrated differential phase contrast.
10.1016/j.ultramic.2015.10.011 · 2016 · External reference
An improved ptychographical phase retrieval algorithm for diffractive imaging.
10.1016/j.ultramic.2009.05.012 · 2009 · External reference
Modeling solid-state chemistry: Interatomic potentials for multicomponent systems.
10.1103/physrevb.39.5566 · 1989 · External reference
On the peculiarities of CBED pattern formation revealed by multislice simulation.
10.1016/j.ultramic.2005.03.003 · 2005 · External reference
Evaluation of Frozen Phonons Models for Multislice Calculation of TDS.
10.1017/s1431927607080658 · 2007 · External reference
Real-Time Data Processing using Python in DigitalMicrograph.
10.1017/s1431927619001909 · 2019 · External reference
