Research graph
References from A genomic exploration of the early evolution of extant cats and their sabre-toothed relatives. Local targets link to admitted publications; unresolved targets remain external evidence.
Phylogeny and evolution of cats (Felidae).
2010 · External reference
The late Miocene radiation of modern Felidae: a genetic assessment.
10.1126/science.1122277 · 2006 · External reference
Smilodon: The Iconic Sabertooth (JHU Press)
2018 · External reference
Relationships between North and South American Smilodon.
10.1080/02724634.1990.10011804 · 1990 · External reference
The sabertooth cat Smilodon populator (Carnivora: Felidae), from Cueva del Milodón, Chile.
2018 · External reference
Molecular phylogenetic inference from saber-toothed cat fossils of Rancho La Brea.
10.1073/pnas.89.20.9769 · 1992 · External reference
Attempted DNA extraction from a Rancho La Brea Columbian mammoth (Mammuthus columbi): prospects for ancient DNA from asphalt deposits.
10.1002/ece3.928 · 2014 · External reference
Evolutionary History of Saber-Toothed Cats Based on Ancient Mitogenomics.
10.1016/j.cub.2017.09.033 · 2017 · External reference
Recombination-Aware Phylogenomics Reveals the Structured Genomic Landscape of Hybridizing Cat Species.
10.1093/molbev/msz139 · 2019 · External reference
Synergistic roles of climate warming and human occupation in Patagonian megafaunal extinctions during the Last Deglaciation.
10.1126/sciadv.1501682 · 2016 · External reference
Evolution of the extinct Sabretooths and the American cheetah-like cat.
10.1016/j.cub.2005.07.052 · 2005 · External reference
Paleobiology of sabretooth cat Smilodon populator in the Pampean Region (Buenos Aires Province, Argentina) around the Last Glacial Maximum: Insights from carbon and nitrogen stable isotopes in bone collagen.
10.1016/j.palaeo.2016.02.017 · 2016 · External reference
The future of ancient DNA: Technical advances and conceptual shifts.
10.1002/bies.201400160 · 2015 · External reference
A genomic exploration of the early evolution of extant cats and their sabre-toothed relatives - extended data.
2021 · External reference
A draft sequence of the Neandertal genome.
10.1126/science.1188021 · 2010 · External reference
Reconstructing Indian population history.
10.1038/nature08365 · 2009 · External reference
Genomic adaptations and evolutionary history of the extinct scimitar-toothed cat, Homotherium latidens.
10.1016/j.cub.2020.09.051 · 2020 · External reference
The phylogenetic context of Smilodon.
2018 · External reference
A Three-Sample Test for Introgression.
10.1093/molbev/msz178 · 2019 · External reference
IntCal13 and Marine13 Radiocarbon Age Calibration Curves 0–50,000 Years cal BP.
10.2458/azu_js_rc.55.16947 · 2013 · External reference
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse.
10.1038/nature12323 · 2013 · External reference
Mitochondrial phylogenomics of modern and ancient equids.
10.1371/journal.pone.0055950 · 2013 · External reference
The tiger genome and comparative analysis with lion and snow leopard genomes.
10.1038/ncomms3433 · 2013 · External reference
Illumina sequencing library preparation for highly multiplexed target capture and sequencing.
10.1101/pdb.prot5448 · 2010 · External reference
Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX.
10.1038/nprot.2014.063 · 2014 · External reference
AdapterRemoval v2: rapid adapter trimming, identification, and read merging.
10.1186/s13104-016-1900-2 · 2016 · External reference
The evolutionary history of extinct and living lions.
10.1073/pnas.1919423117 · 2020 · External reference
Fast and accurate short read alignment with Burrows-Wheeler transform.
10.1093/bioinformatics/btp324 · 2009 · External reference
The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data.
10.1101/gr.107524.110 · 2010 · External reference
mapDamage: testing for damage patterns in ancient DNA sequences.
10.1093/bioinformatics/btr347 · 2011 · External reference
mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters.
10.1093/bioinformatics/btt193 · 2013 · External reference
Skewer: a fast and accurate adapter trimmer for next-generation sequencing paired-end reads.
10.1186/1471-2105-15-182 · 2014 · External reference
ANGSD: Analysis of Next Generation Sequencing Data.
10.1186/s12859-014-0356-4 · 2014 · External reference
FastME 2.0: A Comprehensive, Accurate, and Fast Distance-Based Phylogeny Inference Program.
10.1093/molbev/msv150 · 2015 · External reference
Extended and Continuous Decline in Effective Population Size Results in Low Genomic Diversity in the World’s Rarest Hyena Species, the Brown Hyena.
10.1093/molbev/msy037 · 2018 · External reference
Genetic evidence for two founding populations of the Americas.
10.1038/nature14895 · 2015 · External reference
Admixture and Ancestry Inference from Ancient and Modern Samples through Measures of Population Genetic Drift.
10.13110/humanbiology.89.1.02 · 2017 · External reference
PHYLIP (Phylogeny Inference Package) version 3.6
2005 · External reference
The Sequence Alignment/Map format and SAMtools.
10.1093/bioinformatics/btp352 · 2009 · External reference
R: A language and environment for statistical computing
2013 · External reference
Efficient Coalescent Simulation and Genealogical Analysis for Large Sample Sizes.
10.1371/journal.pcbi.1004842 · 2016 · External reference
Examining the extinction of the Barbary lion and its implications for felid conservation.
10.1371/journal.pone.0060174 · 2013 · External reference
A High-Resolution SNP Array-Based Linkage Map Anchors a New Domestic Cat Draft Genome Assembly and Provides Detailed Patterns of Recombination.
10.1534/g3.116.028746 · 2016 · External reference
Efficiently Summarizing Relationships in Large Samples: A General Duality Between Statistics of Genealogies and Genomes.
10.1534/genetics.120.303253 · 2020 · External reference
