Research graph
References from Plasmids conferring resistance to extended-spectrum beta-lactamases including a rare IncN+IncR multireplicon carrying blaCTX-M-1 in Escherichia coli recovered from migrating barnacle geese (Branta leucopsis). Local targets link to admitted publications; unresolved targets remain external evidence.
IncI1 plasmids associated with the spread of CMY-2, CTX-M-1 and SHV-12 in Escherichia coli of animal and human origin.
10.1111/1469-0691.12128 · 2013 · External reference
Wild Birds, Frequent Carriers of Extended-Spectrum β-Lactamase (ESBL) Producing Escherichia coli of CTX-M and SHV-12 Types.
10.1007/s00248-015-0718-0 · 2016 · External reference
BLAST Ring Image Generator (BRIG): Simple prokaryote genome comparisons.
10.1186/1471-2164-12-402 · 2011 · External reference
ESBL-producing Escherichia coli in Swedish gulls—A case of environmental pollution from humans?
10.1371/journal.pone.0190380 · 2017 · External reference
Genomic landscape of multi-drug resistant avian pathogenic Escherichia coli recovered from broilers.
10.1016/j.vetmic.2020.108766 · 2020 · External reference
Investigation of diversity of plasmids carrying the blaTEM-52 gene.
10.1093/jac/dkr331 · 2011 · External reference
Dissemination of Escherichia coli with CTX-M type ESBL between humans and yellow-legged gulls in the south of France.
10.1371/journal.pone.0005958 · 2009 · External reference
Extended-spectrum β-lactamases in Escherichia coli and Klebsiella pneumoniae in Gulls, Alaska, USA.
10.3201/eid2005.130325 · 2014 · External reference
Antibiotic resistance in wild birds.
10.3109/03009734.2014.905663 · 2014 · External reference
IncI shufflons: Assembly issues in the next-generation sequencing era.
10.1016/j.plasmid.2015.04.009 · 2015 · External reference
Resistance plasmid families in Enterobacteriaceae.
10.1128/aac.01707-08 · 2009 · External reference
Complete nucleotide sequence of the IncN plasmid pKOX105 encoding VIM-1, QnrS1 and SHV-12 proteins in Enterobacteriaceae from Bolzano, Italy compared with IncN plasmids encoding KPC enzymes in the USA.
10.1093/jac/dkq269 · 2010 · External reference
Plasmids in Gram negatives: Molecular typing of resistance plasmids.
10.1016/j.ijmm.2011.09.003 · 2011 · External reference
Plasmids and the spread of resistance.
10.1016/j.ijmm.2013.02.001 · 2013 · External reference
In Silico detection and typing of plasmids using plasmidfinder and plasmid multilocus sequence typing.
10.1128/aac.02412-14 · 2014 · External reference
Antimicrobial Resistance in Wildlife: Implications for Public Health.
10.1111/zph.12182 · 2015 · External reference
Antibiotic resistance threats in the United States, 2019.
10.15620/cdc:82532 · 2019 · External reference
Complete nucleotide sequence of pK245, a 98-kilobase plasmid conferring quinolone resistance and extended-spectrum-beta-lactamase activity in a clinical Klebsiella pneumoniae isolate.
10.1128/aac.00456-06 · 2006 · External reference
Rapid and precise alignment of raw reads against redundant databases with KMA.
10.1186/s12859-018-2336-6 · 2018 · External reference
High prevalence and diversity of extended-spectrum β-lactamase and emergence of OXA-48 producing Enterobacterales in wildlife in Catalonia.
10.1371/journal.pone.0210686 · 2019 · External reference
Extended-spectrum β-lactamase-producing Escherichia coli in human-derived and foodchain-derived samples from England, Wales, and Scotland: an epidemiological surveillance and typing study.
10.1016/s1473-3099(19)30273-7 · 2019 · External reference
Organization of the leading region of IncN plasmid pKM101 (R46): A regulation controlled by CUP sequence elements.
10.1006/jmbi.1997.1124 · 1997 · External reference
Complete nucleotide sequence of the large conjugative pTC2 multireplicon plasmid encoding the VIM-1 metallo-β-lactamase.
10.1093/jac/dks367 · 2013 · External reference
Characterization of IncN plasmids carrying blaCTX-M-1 and qnr genes in Escherichia coli and Salmonella from animals, the environment and humans.
10.1093/jac/dks387 · 2013 · External reference
Plasmid-mediated resistance is going wild.
10.1016/j.plasmid.2018.09.010 · 2018 · External reference
Scientific Opinion on the public health risks of bacterial strains producing extended-spectrum β-lactamases and/or AmpC β-lactamases in food and food-producing animals.
10.2903/j.efsa.2011.2322 · 2011 · External reference
The European Union Summary Report on Antimicrobial Resistance in zoonotic and indicator bacteria from humans, animals and food in 2017/2018.
10.2903/j.efsa.2020.6007 · 2020 · External reference
Potential disease transmission from wild geese and swans to livestock, poultry and humans: a review of the scientific literature from a One Health perspective.
10.1080/20008686.2017.1300450 · 2017 · External reference
European Committee on Antimicrobial Susceptibility Testing. EUCAST Disk Diffusion Method Manual 6.0
2017 · External reference
European Committee on Antimicrobial Susceptibility Testing. Antimicrobial wild type, distributions of microorganisms
2019 · External reference
Extended-spectrum β-lactamase-producing and AmpC-producing Escherichia coli from livestock and companion animals, and their putative impact on public health: A global perspective.
10.1111/j.1469-0691.2012.03850.x · 2012 · External reference
A global audit of the status and trends of Arctic and Northern Hemisphere goose populations
2018 · External reference
Enteropathogenic and enterohaemorrhagic Escherichia coli : more subversive elements.
10.1046/j.1365-2958.1998.01144.x · 1998 · External reference
Characterization of plasmids harbouring qnrS1, qnrB2 and qnrB19 genes in Salmonella.
10.1093/jac/dkn470 · 2009 · External reference
Comparable High Rates of Extended-Spectrum-Beta-Lactamase-Producing Escherichia coli in Birds of Prey from Germany and Mongolia.
10.1371/journal.pone.0053039 · 2012 · External reference
Comparative analysis of an IncR plasmid carrying armA, blaDHA-1 and qnrB4 from Klebsiella pneumoniae ST37 isolates.
10.1093/jac/dkv444 · 2016 · External reference
Rapid whole-genome sequencing for detection and characterization of microorganisms directly from clinical samples.
10.1128/jcm.02452-13 · 2014 · External reference
Migratory bird, Branta leucopis (Barnacle goose), a potential carrier of diverse Escherichia coli serotypes into pristime Arctic environment.
2013 · External reference
Anthropogenic antibiotic resistance genes mobilization to the polar regions.
10.3402/iee.v6.32112 · 2016 · External reference
High Prevalence and Temporal Variation of Extended Spectrum β-Lactamase-Producing Bacteria in Urban Swedish Mallards.
10.1089/mdr.2017.0263 · 2018 · External reference
Understanding the mechanisms and drivers of antimicrobial resistance.
10.1016/s0140-6736(15)00473-0 · 2016 · External reference
AEWA International Single Species Management Plan for the Barnacle Goose (Branta leucopsis) - Russia/Germany & Netherlands population, East Greenland/Scotland & Ireland population, Svalbard/South-west Scotland population
2018 · External reference
Whole Genome Sequencing of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli Isolated From a Wastewater Treatment Plant in China.
10.3389/fmicb.2019.01797 · 2019 · External reference
Genomic diversification of IncR plasmids from China.
10.1016/j.jgar.2019.06.007 · 2019 · External reference
Real-time whole-genome sequencing for routine typing, surveillance, and outbreak detection of verotoxigenic Escherichia coli.
10.1128/jcm.03617-13 · 2014 · External reference
Evolution of the iss gene in Escherichia coli.
10.1128/aem.02634-07 · 2008 · External reference
Global trends in emerging infectious diseases.
10.1038/nature06536 · 2008 · External reference
Molecular characterization of avian pathogenic Escherichia coli from broiler chickens with colibacillosis.
10.1016/j.psj.2019.10.047 · 2020 · External reference
Virulence Genes and the Antimicrobial Susceptibility of Escherichia coli, Isolated from Wild Waterbirds, in the Netherlands and Poland.
10.1089/vbz.2015.1935 · 2016 · External reference
Extended-spectrum beta-lactamase-producing Enterobacteriaceae (ESBL-PE) among travellers to Africa: Destination-specific data pooled from three European prospective studies.
10.1186/s12879-018-3245-z · 2018 · External reference
Multilocus sequence typing of total-genome-sequenced bacteria.
10.1128/jcm.06094-11 · 2012 · External reference
Benchmarking of methods for genomic taxonomy.
10.1128/jcm.02981-13 · 2014 · External reference
Dutch patients, retail chicken meat and poultry share the same ESBL genes, plasmids and strains.
10.1111/j.1469-0691.2011.03497.x · 2011 · External reference
cano-wgMLST_BacCompare: A Bacterial Genome Analysis Platform for Epidemiological Investigation and Comparative Genomic Analysis.
10.3389/fmicb.2019.01687 · 2019 · External reference
Characterization of the Campylobacter jejuni Population in the Barnacle Geese Reservoir.
10.1111/zph.12141 · 2015 · External reference
Global transcriptional regulator KorC coordinates expression of three backbone modules of the broad-host-range RA3 plasmid from IncU incompatibility group.
10.1016/j.plasmid.2013.03.007 · 2013 · External reference
Sequence relations among the IncY plasmid p15B, P1, and P7 prophages.
10.1016/0147-619x(86)90066-1 · 1986 · External reference
Predominance of CTX-M-15 among ESBL producers from environment and fish gut from the shores of Lake Victoria in Mwanza, Tanzania.
10.3389/fmicb.2016.01862 · 2016 · External reference
Attributable sources of community-acquired carriage of Escherichia coli containing β-lactam antibiotic resistance genes: a population-based modelling study.
10.1016/s2542-5196(19)30130-5 · 2019 · External reference
Distribution of virulence factors in ESBL-producing Escherichia coli isolated from the environment, livestock, food and humans.
10.1016/j.scitotenv.2015.09.135 · 2016 · External reference
virF-positive Yersinia pseudotuberculosis and Yersinia enterocolitica found in migratory birds in Sweden.
10.1128/aem.69.8.4670-4675.2003 · 2003 · External reference
Epidemiology and Diagnostics of Carbapenem Resistance in Gram-negative Bacteria.
10.1093/cid/ciz824 · 2019 · External reference
Direct vertical transmission of ESBL/pAmpC-producing Escherichia coli limited in poultry production pyramid.
10.1016/j.vetmic.2019.03.001 · 2019 · External reference
Characterization of pKP1780, a novel IncR plasmid from the emerging Klebsiella pneumoniae ST147, encoding the VIM-1 metallo-Β-lactamase.
10.1093/jac/dkt196 · 2013 · External reference
Wild coastline birds as reservoirs of broad-spectrum-β-lactamase-producing Enterobacteriaceae in Miami Beach, Florida.
10.1128/aac.05982-11 · 2012 · External reference
Whole genome sequence comparison of avian pathogenic Escherichia coli from acute and chronic salpingitis of egg laying hens.
10.1186/s12917-020-02369-5 · 2020 · External reference
Comparative analysis of KPC-2-encoding chimera plasmids with multi-replicon IncR:Inc pA1763-KPC:IncN1 or IncFII pHN7A8:Inc pA1763-KPC:IncN1.
10.2147/idr.s189168 · 2019 · External reference
ESBL:ää tuottavien suolistobakteerien oireeton kantajuus Etelä-Suomessa.
2018 · External reference
Plasmids carrying antimicrobial resistance genes in Enterobacteriaceae.
10.1093/jac/dkx488 · 2018 · External reference
Long-term carriage and rapid transmission of extended spectrum beta-lactamase-producing E. coli within a flock of Mallards in the absence of antibiotic selection.
10.1111/1758-2229.12681 · 2018 · External reference
Prokka: rapid prokaryotic genome annotation.
10.1093/bioinformatics/btu153 · 2014 · External reference
Seagulls and beaches as reservoirs for multidrug-resistant Escherichia coli.
10.3201/eid1601.090896 · 2010 · External reference
Carriage of CTX-M type extended spectrum β-lactamases (ESBLs) in gulls across Europe.
10.1186/s13028-015-0166-3 · 2015 · External reference
Valkoposkihanhien seuranta.
External reference
Valkoposkihanhien väheneminen pääkaupunkiseudulla taittui.
External reference
Association of iss and iucA, but not tsh, with plasmid-mediated virulence of avian pathogenic Escherichia coli.
10.1128/iai.72.11.6554-6560.2004 · 2004 · External reference
The role of international travel in the worldwide spread of multiresistant Enterobacteriaceae.
10.1093/jac/dks214 · 2012 · External reference
Characteristics of cefotaxime-resistant Escherichia coli from wild birds in The Netherlands.
10.1128/aem.01880-13 · 2013 · External reference
The bactericidal effect of ultraviolet and visible light on Escherichia coli.
10.1002/bit.21611 · 2008 · External reference
Solar and temporal effects on Escherichia coli concentration at a Lake Michigan swimming beach.
10.1128/aem.70.7.4276-4285.2004 · 2004 · External reference
WHO Global Health Observatory
External reference
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.
10.1371/journal.pcbi.1005595 · 2017 · External reference
Sex and virulence in Escherichia coli: An evolutionary perspective.
10.1111/j.1365-2958.2006.05172.x · 2006 · External reference
Travel-acquired ESBL-producing Enterobacteriaceae: impact of colonization at individual and community level.
10.1093/jtm/taw101 · 2017 · External reference
Genomic and antimicrobial resistance genes diversity in multidrug-resistant CTX-M-positive isolates of Escherichia coli at a health care facility in Jeddah.
10.1016/j.jiph.2019.06.011 · 2020 · External reference
The Barnacle Goose (Branta leucopsis) in the archipelago of southern Finland - population growth and nesting dispersal
10.51812/of.133921 · 2017 · External reference
Identification of acquired antimicrobial resistance genes.
10.1093/jac/dks261 · 2012 · External reference
Grapetree: Visualization of core genomic relationships among 100,000 bacterial pathogens.
10.1101/gr.232397.117 · 2018 · External reference
