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References from Subcellular proteomics of the protist Paradiplonema papillatum reveals the digestive capacity of the cell membrane and the plasticity of peroxisomes across euglenozoans. Local targets link to admitted publications; unresolved targets remain external evidence.
Extreme diversity of diplonemid eukaryotes in the ocean
10.1016/j.cub.2016.09.031 · 2016 · External reference
Morphological identification and single-cell genomics of marine diplonemids
10.1016/j.cub.2016.09.013 · 2016 · External reference
A freshwater radiation of diplonemids
10.1111/1462-2920.15209 · 2020 · External reference
A metagenomic assessment of microbial eukaryotic diversity in the global ocean
10.1111/1755-0998.13147 · 2020 · External reference
Phylogenomic position of eupelagonemids, abundant, and diverse deep-ocean heterotrophs
2024 · External reference
Diplonemids—a review on “New” flagellates on the oceanic block
10.1016/j.protis.2022.125868 · 2022 · External reference
Trophic flexibility of marine diplonemids—switching from osmotrophy to bacterivory
10.1038/s41396-022-01192-0 · 2022 · External reference
Highly flexible metabolism of the marine euglenozoan protist Diplonema papillatum
10.1186/s12915-021-01186-y · 2021 · External reference
Recent expansion of metabolic versatility in Diplonema papillatum, the model species of a highly speciose group of marine eukaryotes
10.1186/s12915-023-01563-9 · 2023 · External reference
The genome sequences of the diplonemid protist Diplonema japonicum YFP1604 and its bacterial endosymbiont Ca. Cytomitobacter primus and Ca. Nesciobacter abundans.
10.12688/wellcomeopenres.23917.1 · 2025 · External reference
The genome sequences of the diplonemid protist Rhynchopus euleeides YPF1915 and its bacterial endosymbiont Candidatus Syngnamydia salmonis (Chlamydiota)
10.12688/wellcomeopenres.24014.1 · 2025 · External reference
Targeted integration by homologous recombination enables in situ tagging and replacement of genes in the marine microeukaryote Diplonema papillatum
10.1111/1462-2920.15130 · 2020 · External reference
Discovery of unique mitotic mechanisms in Paradiplonema papillatum
10.1098/rsob.250096 · 2025 · External reference
Miniature RNAs are embedded in an exceptionally protein-rich mitoribosome via an elaborate assembly pathway
10.1093/nar/gkad422 · 2023 · External reference
Respiratory chain Complex I of unparalleled divergence in diplonemids
10.1074/jbc.ra118.005326 · 2018 · External reference
On the possibility of yet a third kinetochore system in the protist phylum Euglenozoa
10.1128/mbio.02936-24 · 2024 · External reference
Diplonemid protists possess exotic endomembrane machinery, impacting models of membrane trafficking in modern and ancient eukaryotes
10.1016/j.cub.2025.02.032 · 2025 · External reference
Reconstructing the last common ancestor of all eukaryotes
10.1371/journal.pbio.3002917 · 2024 · External reference
Combining LOPIT with differential ultracentrifugation for high-resolution spatial proteomics
10.1038/s41467-018-08191-w · 2019 · External reference
The glycosomes of the Kinetoplastida
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ATPaseTb2, a unique membrane-bound FoF1-ATPase component, is essential in bloodstream and dyskinetoplastic trypanosomes
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Dysregulation of mitochondrial quality control processes contribute to sarcopenia in a mouse model of premature aging
2013 · External reference
The stabilization of PD-L1 by the endoplasmic reticulum stress protein GRP78 in triple-negative breast cancer
2020 · External reference
Proteome discoverer—a community enhanced data processing suite for protein informatics
10.3390/proteomes9010015 · 2021 · External reference
Learning from heterogeneous data sources: an application in spatial proteomics
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Detecting sequence signals in targeting peptides using deep learning
10.26508/lsa.201900429 · 2019 · External reference
SignalP 6.0 predicts all five types of signal peptides using protein language models
10.1038/s41587-021-01156-3 · 2022 · External reference
DeepTMHMM predicts alpha and beta transmembrane proteins using deep neural networks
2022 · External reference
Genome-wide subcellular protein map for the flagellate parasite Trypanosoma brucei
10.1038/s41564-022-01295-6 · 2023 · External reference
Ultrastructure and 3D reconstruction of a diplonemid protist (Diplonemea) and its novel membranous organelle
10.1128/mbio.01921-23 · 2023 · External reference
Isonema papillatum sp. n., a new colorless marine flagellate: a light- and electronmicroscopic study
10.1111/j.1550-7408.1973.tb00895.x · 1973 · External reference
Fungi and bacteria in or on leaves of Eelgrass (Zostera marina L.) from Chesapeake Bay
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Gene transfer agents in bacterial endosymbionts of microbial eukaryotes
10.1093/gbe/evac099 · 2022 · External reference
Description of new diplonemids (Diplonemea, Euglenozoa) and their endosymbionts: charting the morphological diversity of these poorly known heterotrophic flagellates
10.1016/j.protis.2025.126090 · 2025 · External reference
Metabolic functions of glycosomes in trypanosomatids
10.1016/j.bbamcr.2006.08.019 · 2006 · External reference
Compartmentalization of a glycolytic enzyme in Diplonema, a non-kinetoplastid euglenozoan
10.1016/j.protis.2010.11.003 · 2011 · External reference
Differential remodelling of peroxisome function underpins the environmental and metabolic adaptability of diplonemids and kinetoplastids
2016 · External reference
Subcellular proteomics of Paramecium tetraurelia reveals mosaic localization of glycolysis and gluconeogenesis
2025 · External reference
The obvious and the hidden: prediction and function of fungal peroxisomal matrix proteins
10.1007/978-981-13-2233-4_6 · 2018 · External reference
Mitochondrial glycolysis in a major lineage of eukaryotes
10.1093/gbe/evy164 · 2018 · External reference
The pentose phosphate pathway in parasitic trypanosomatids
10.1016/j.pt.2016.04.010 · 2016 · External reference
High-confidence glycosome proteome for procyclic form Trypanosoma brucei by epitope-tag organelle enrichment and SILAC proteomics
10.1021/pr401209w · 2014 · External reference
Mapping diversity in African trypanosomes using high resolution spatial proteomics
10.1038/s41467-023-40125-z · 2023 · External reference
The mitochondrial proteome of diplonemids: from conventional pathway to eccentric RNA editing and transcript processing
2025 · External reference
A uniquely complex mitochondrial proteome from Euglena gracilis
10.1093/molbev/msaa061 · 2020 · External reference
Genetic tool development in marine protists: emerging model organisms for experimental cell biology
10.1038/s41592-020-0796-x · 2020 · External reference
A Bioconductor workflow for the Bayesian analysis of spatial proteomics
10.12688/f1000research.18636.1 · 2019 · External reference
DeepLoc 2.1: multi-label membrane protein type prediction using protein language models
2024 · External reference
Prediction of GPI-anchored proteins with pointer neural networks
10.1016/j.crbiot.2021.01.001 · 2021 · External reference
BlastKOALA and GhostKOALA: KEGG Tools for functional characterization of genome and metagenome sequences
10.1016/j.jmb.2015.11.006 · 2016 · External reference
The PRIDE database at 20 years: 2025 update
10.1093/nar/gkae1011 · 2025 · External reference
Functional differentiation of Sec13 paralogues in the euglenozoan protists
10.1098/rsob.220364 · 2023 · External reference
Transformation of Diplonema papillatum, the type species of the highly diverse and abundant marine microeukaryotes Diplonemida (Euglenozoa)
10.1111/1462-2920.14041 · 2018 · External reference
