Research graph
References from PLNMFG: Pseudo-label guided non-negative matrix factorization model with graph constraint for single-cell multi-omics data clustering. Local targets link to admitted publications; unresolved targets remain external evidence.
Methods of integrating data to uncover genotype-phenotype interactions
10.1038/nrg3868 · 2015 · External reference
Trans-omics: how to reconstruct biochemical networks across multiple “Omic” layers
10.1016/j.tibtech.2015.12.013 · 2016 · External reference
Clustering single-cell multi-omics data with MoClust
10.1093/bioinformatics/btac736 · 2023 · External reference
10.1101/2020.05.08.083337
10.1101/2020.05.08.083337 · External reference
A deep generative model for multi-view profiling of single-cell RNA-seq and ATAC-seq data
10.1186/s13059-021-02595-6 · 2022 · External reference
Challenges in unsupervised clustering of single-cell RNA-seq data
10.1038/s41576-018-0088-9 · 2019 · External reference
Integrating single-cell transcriptomic data across different conditions, technologies, and species
10.1038/nbt.4096 · 2018 · External reference
TSCAN: pseudo-time reconstruction and evaluation in single-cell RNA-seq analysis
2016 · External reference
Unresolved reference
External reference
10.1109/tai.2025.3559053
10.1109/tai.2025.3559053 · External reference
WSNMF: weighted symmetric nonnegative matrix factorization for attributed graph clustering
10.1016/j.neucom.2023.127041 · 2024 · External reference
Graph regularized nonnegative matrix factorization for community detection in attributed networks
10.1109/tnse.2022.3210233 · 2023 · External reference
A comprehensive survey on spectral clustering with graph-structure learning
2025 · External reference
10.1137/1.9781611972832.28
10.1137/1.9781611972832.28 · External reference
Multi-view clustering via multi-manifold regularized non-negative matrix factorization
10.1016/j.neunet.2017.02.003 · 2017 · External reference
Multi-view clustering by non-negative matrix factorization with co-orthogonal constraints
10.1016/j.knosys.2020.105582 · 2020 · External reference
Multiview clustering based on non-negative matrix factorization and pairwise measurements
10.1109/tcyb.2018.2842052 · 2019 · External reference
scMNMF: a novel method for single-cell multi-omics clustering based on matrix factorization
2024 · External reference
Pseudo-label guided collective matrix factorization for multiview clustering
10.1109/tcyb.2021.3051182 · 2022 · External reference
Dimensionality reduction for single cell RNA sequencing data using constrained robust non-negative matrix factorization
2020 · External reference
SSNMDI: a novel joint learning model of semi-supervised non-negative matrix factorization and data imputation for clustering of single-cell RNA-seq data
2023 · External reference
Graph-regularized non-negative matrix factorization for data representation
2010 · External reference
MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data
10.1186/s13059-020-02015-1 · 2020 · External reference
BREM-SC: a bayesian random effects mixture model for joint clustering single cell multi-omics data
10.1093/nar/gkaa314 · 2020 · External reference
