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References from Quantifying HiPSC-CM structural organization at scale with deep learning-enhanced SarcGraph. Local targets link to admitted publications; unresolved targets remain external evidence.
Multiscale characterization of heart failure
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10.1093/cvr/cvy208 · 2018 · External reference
Drug screening using a library of human induced pluripotent stem cell-derived cardiomyocytes reveals disease-specific patterns of cardiotoxicity
10.1161/circulationaha.113.001883 · 2013 · External reference
Transcriptome profiling of patient-specific human iPSC-cardiomyocytes predicts individual drug safety and efficacy responses in vitro
10.1016/j.stem.2016.07.006 · 2016 · External reference
Structural Immaturity of Human iPSC-Derived Cardiomyocytes: In Silico Investigation of Effects on Function and Disease Modeling
10.3389/fphys.2018.00080 · 2018 · External reference
Modeling Cardiovascular Diseases with hiPSC-Derived Cardiomyocytes in 2D and 3D Cultures
10.3390/ijms21093404 · 2020 · External reference
Programming Cellular Alignment in Engineered Cardiac Tissue via Bioprinting Anisotropic Organ Building Blocks
10.1002/adma.202200217 · 2022 · External reference
Induced pluripotent stem cell-derived cardiomyocyte in vitro models: benchmarking progress and ongoing challenges
10.1038/s41592-024-02480-7 · 2025 · External reference
Automated image analysis system for studying cardiotoxicity in human pluripotent stem cell-Derived cardiomyocytes
10.1186/s12859-020-3466-1 · 2020 · External reference
Multi-Imaging Method to Assay the Contractile Mechanical Output of Micropatterned Human iPSC-Derived Cardiac Myocytes
10.1161/circresaha.116.310363 · 2017 · External reference
High content analysis identifies unique morphological features of reprogrammed cardiomyocytes
10.1038/s41598-018-19539-z · 2018 · External reference
Automated Sarcomere Structure Analysis for Studying Cardiotoxicity in Human Pluripotent Stem Cell-Derived Cardiomyocytes
10.1093/micmic/ozac016 · 2022 · External reference
Striated myocyte structural integrity: Automated analysis of sarcomeric z-discs
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SarcOptiM for ImageJ: high-frequency online sarcomere length computing on stimulated cardiomyocytes
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Sarcomere protein gene mutations in hypertrophic cardiomyopathy of the elderly
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Sarcomere alignment is regulated by myocyte shape
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Structural phenotyping of stem cell-derived cardiomyocytes
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Tracking single hiPSC-derived cardiomyocyte contractile function using CONTRAX an efficient pipeline for traction force measurement
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SarcTrack
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Sarc-Graph: Automated segmentation, tracking, and analysis of sarcomeres in hiPSC-derived cardiomyocytes
10.1371/journal.pcbi.1009443 · 2021 · External reference
SarcGraph: A Python package for analyzing the contractile behavior of pluripotent stem cell-derived cardiomyocytes
10.21105/joss.05322 · 2023 · External reference
Cell states beyond transcriptomics: Integrating structural organization and gene expression in hiPSC-derived cardiomyocytes
2021 · External reference
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Self-supervised deep learning encodes high-resolution features of protein subcellular localization
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Rater Effects on Essay Scoring: A Multilevel Analysis of Severity Drift, Central Tendency, and Rater Experience
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Independent regulation of Z-lines and M-lines during sarcomere assembly in cardiac myocytes revealed by the automatic image analysis software sarcApp
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Decoding rejuvenating effects of mechanical loading on skeletal aging using in vivo μCT imaging and deep learning
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Deep Learning for Cardiac Image Segmentation: A Review
10.3389/fcvm.2020.00025 · 2020 · External reference
Machine learning identifies remodeling patterns in human lung extracellular matrix
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A deep learning approach to estimate chemically-treated collagenous tissue nonlinear anisotropic stress-strain responses from microscopy images
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A generalized Laplacian of Gaussian filter for blob detection and its applications
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Investigating deep learning model calibration for classification problems in mechanics
10.1016/j.mechmat.2023.104749 · 2023 · External reference
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Self-organization of muscle cell structure and function
10.1371/journal.pcbi.1001088 · 2011 · External reference
Quality metrics for stem cell-derived cardiac myocytes
10.1016/j.stemcr.2014.01.015 · 2014 · External reference
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