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References from Opportunities for machine learning to predict cross-neutralization in FMDV serotype O. Local targets link to admitted publications; unresolved targets remain external evidence.
ICTV Virus Taxonomy Profile: Picornaviridae
10.1099/jgv.0.000911 · 2017 · External reference
Foot‐and‐mouth disease impact on smallholders ‐ what do we know, what don’t we know and how can we find out more?
10.1111/tbed.12507 · 2017 · External reference
Structures of Foot-and-mouth Disease Virus with neutralizing antibodies derived from recovered natural host reveal a mechanism for cross-serotype neutralization
2021 · External reference
Review of the Global Distribution of Foot-and-Mouth Disease Virus from 2007 to 2014
10.1111/tbed.12373 · 2017 · External reference
Foot-and-mouth disease
10.1128/cmr.17.2.465-493.2004 · 2004 · External reference
Characterization of the FMDV-serotype-O isolates collected during 1962 and 1997 discloses new topotypes, CEY-1 and WCSA-1, and six new lineages
10.1038/s41598-019-51120-0 · 2019 · External reference
Accuracy of traditional and novel serology tests for predicting cross-protection in foot-and-mouth disease vaccinated cattle
10.1016/j.vaccine.2013.12.007 · 2014 · External reference
Unresolved reference
External reference
Predicting the Antigenic Relationship of Foot-and-Mouth Disease Virus for Vaccine Selection Through a Computational Model
10.1109/tcbb.2019.2923396 · 2021 · External reference
Evaluation and use of in-silico structure-based epitope prediction with foot-and-mouth disease virus
10.1371/journal.pone.0061122 · 2013 · External reference
Prediction and characterization of novel epitopes of serotype A foot-and-mouth disease viruses circulating in East Africa using site-directed mutagenesis
10.1099/vir.0.000051 · 2015 · External reference
Evolutionary non-linear modelling for selecting vaccines against antigenically variable viruses
10.1093/bioinformatics/btu768 · 2015 · External reference
A sparse hierarchical Bayesian model for detecting relevant antigenic sites in virus evolution
10.1007/s00180-017-0730-6 · 2017 · External reference
Sequence-based prediction for vaccine strain selection and identification of antigenic variability in foot-and-mouth disease virus
10.1371/journal.pcbi.1001027 · 2010 · External reference
Machine Learning Prediction and Experimental Validation of Antigenic Drift in H3 Influenza A Viruses in Swine
10.1128/msphere.00920-20 · 2021 · External reference
Dengue genetic divergence generates within-serotype antigenic variation, but serotypes dominate evolutionary dynamics
2019 · External reference
Flavivirus-induced antibody cross-reactivity
10.1099/vir.0.031641-0 · 2011 · External reference
Genome Sequences of Antigenically Distinct Serotype O Foot-and-Mouth Disease Viruses from Pakistan
10.1128/mra.01397-18 · 2019 · External reference
Foot and Mouth Disease Vaccine Matching and Post-Vaccination Assessment in Abu Dhabi, United Arab Emirates
2024 · External reference
Emergency FMD Serotype O Vaccines Protect Cattle against Heterologous Challenge with a Variant Foot-and-Mouth Disease Virus from the O/ME-SA/Ind2001 Lineage
10.3390/vaccines9101110 · 2021 · External reference
Vaccine matching and antigenic variability of foot-and-mouth disease virus serotypes O and A from 2018 Ethiopian isolates
10.1007/s10123-021-00178-w · 2022 · External reference
Estimating the protection afforded by foot-and-mouth disease vaccines in the laboratory
10.1016/j.vaccine.2019.07.102 · 2019 · External reference
Avidity and subtyping of specific antibodies applied to the indirect assessment of heterologous protection against Foot-and-Mouth Disease Virus in cattle
10.1016/j.vaccine.2012.09.011 · 2012 · External reference
Confidence in indirect assessment of foot-and-mouth disease vaccine potency and vaccine matching carried out by liquid phase ELISA and virus neutralization tests
10.1016/j.vaccine.2010.07.012 · 2010 · External reference
Some guidelines for determining foot-and-mouth disease vaccine strain matching by serology
10.1016/j.vaccine.2008.11.026 · 2009 · External reference
Predicting evolution from the shape of genealogical trees
10.7554/elife.03568 · 2014 · External reference
A deep learning approach for predicting antigenic variation of influenza A H3N2
10.1155/2021/9997669 · 2021 · External reference
Convolutional Neural Network Based Approach to in Silico Non-Anticipating Prediction of Antigenic Distance for Influenza Virus
10.3390/v12091019 · 2020 · External reference
Antigenicity prediction and vaccine recommendation of human influenza virus A (H3N2) using convolutional neural networks
10.1080/21645515.2020.1734397 · 2020 · External reference
Ecological and evolutionary dynamics of multi-strain RNA viruses
2022 · External reference
First Impressions Matter: Immune Imprinting and Antibody Cross-Reactivity in Influenza and SARS-CoV-2
10.3390/pathogens12020169 · 2023 · External reference
Human poly- and cross-reactive anti-viral antibodies and their impact on protection and pathology
10.1007/s12026-012-8268-8 · 2012 · External reference
Arbovirus-mosquito vector-host interactions and the impact on transmission and disease pathogenesis of arboviruses
2019 · External reference
Evidence of combined effect of amino acid substitutions within G-H and B-C loops of VP1 conferring serological heterogeneity in foot-and-mouth disease virus serotype A
10.1111/tbed.13687 · 2021 · External reference
Highly accurate protein structure prediction with AlphaFold
10.1038/s41586-021-03819-2 · 2021 · External reference
The Protein Data Bank
10.1093/nar/28.1.235 · 2000 · External reference
Structure of a major immunogenic site on foot-and-mouth disease virus
10.1038/362566a0 · 1993 · External reference
An IgG1 single-dilution avidity ELISA predicts cross-protection against heterologous foot-and-mouth disease virus challenge after vaccination
10.1016/j.vaccine.2024.06.033 · 2024 · External reference
Predicting antigenic sites on the foot-and-mouth disease virus capsid of the South African Territories types using virus neutralization data
10.1099/vir.0.032839-0 · 2011 · External reference
A vaccine-matching assessment of different genetic variants of serotype O foot-and-mouth disease virus isolated in Ethiopia between 2011 and 2014
10.1007/s00705-020-04662-y · 2020 · External reference
Molecular basis of antigenic drift in serotype O foot-and-mouth disease viruses (2013-2018) from Southeast Asia
10.3390/v13091886 · 2021 · External reference
Characterization of monoclonal antibodies against foot-and-mouth disease virus serotype O and application in identification of antigenic variation in relation to vaccine strain selection
10.1186/1743-422x-11-136 · 2014 · External reference
Predicting cross-protection against foot-and-mouth disease virus strains by serology after vaccination
2022 · External reference
Foot and mouth disease (infection with foot and mouth disease virus)
2022 · External reference
AliView: a fast and lightweight alignment viewer and editor for large datasets
10.1093/bioinformatics/btu531 · 2014 · External reference
10.1093/molbev/msy096
10.1093/molbev/msy096 · 2018 · External reference
Evolutionary divergence and convergence in proteins
10.1016/b978-1-4832-2734-4.50017-6 · 1965 · External reference
Unresolved reference
External reference
Handling biological sequences in R with the bioseq package
10.1111/2041-210x.13490 · 2020 · External reference
Ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
10.1093/bioinformatics/bty633 · 2019 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Synthesis of chalcones from 3-formyl-substituted pyrrolo[3,4-f]indole-5,7-diones
10.1007/s11172-017-1823-7 · 2017 · External reference
Potential Novel N-Glycosylation Patterns Associated with the Emergence of New Genetic Variants of PRRSV-2 in the U.S
10.3390/vaccines10122021 · 2022 · External reference
Predicting influenza antigenicity from Hemagglutintin sequence data based on a joint random forest method
10.1038/s41598-017-01699-z · 2017 · External reference
Integrating influenza antigenic dynamics with molecular evolution
10.7554/elife.01914 · 2014 · External reference
Building predictive models in R using the caret package
10.18637/jss.v028.i05 · 2008 · External reference
Classification and Regression by randomForest
2002 · External reference
Random Forests
2008 · External reference
What variables are important in predicting bovine viral diarrhea virus? A random forest approach
10.1186/s13567-015-0219-7 · 2015 · External reference
Predicting antigenic distance from genetic data for PRRSV-Type 1: applications of machine learning
10.1128/spectrum.04085-22 · 2023 · External reference
