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References from Whole genome sequencing of Yersinia pestis isolates from Central Asian natural plague foci revealed the role of adaptation to different hosts and environmental conditions in shaping specific genotypes. Local targets link to admitted publications; unresolved targets remain external evidence.
Yersinia pestis--etiologic agent of plague
10.1128/cmr.10.1.35 · 1997 · External reference
Yersinia pestis: the Natural History of Plague
10.1128/cmr.00044-19 · 2020 · External reference
History of the Plague: An Ancient Pandemic for the Age of COVID-19
10.1016/j.amjmed.2020.08.019 · 2021 · External reference
The Natural and Clinical History of Plague: From the Ancient Pandemics to Modern Insights
10.3390/microorganisms12010146 · 2024 · External reference
Varieties of Pasteurella pestis; new hypothesis
1951 · External reference
Genotyping and phylogenetic analysis of Yersinia pestis by MLVA: insights into the worldwide expansion of Central Asia plague foci
2009 · External reference
Taxonomy of Yersinia pestis
10.1007/978-94-024-0890-4_3 · 2016 · External reference
Yersinia pestis and the plague of Justinian 541-543 AD: a genomic analysis
10.1016/s1473-3099(13)70323-2 · 2014 · External reference
Historical Y. pestis Genomes Reveal the European Black Death as the Source of Ancient and Modern Plague Pandemics
10.1016/j.chom.2016.05.012 · 2016 · External reference
The source of the Black Death in fourteenth-century central Eurasia
10.1038/s41586-022-04800-3 · 2022 · External reference
Genetics of metabolic variations between Yersinia pestis biovars and the proposal of a new biovar, microtus
10.1128/jb.186.15.5147-5152.2004 · 2004 · External reference
Phylogeny and Classification of Yersinia pestis Through the Lens of Strains From the Plague Foci of Commonwealth of Independent States
10.3389/fmicb.2018.01106 · 2018 · External reference
Genome sequence of Yersinia pestis, the causative agent of plague
10.1038/35097083 · 2001 · External reference
A comprehensive study on the role of the Yersinia pestis virulence markers in an animal model of pneumonic plague
10.1007/s12223-011-0027-z · 2011 · External reference
Yersinia pestis Plasminogen Activator
10.3390/biom10111554 · 2020 · External reference
Whole-Genome Assembly of Yersinia pestis 231, the Russian Reference Strain for Testing Plague Vaccine Protection
10.1128/mra.01373-20 · 2021 · External reference
Complete Genome Assembly of Yersinia pestis subsp. pestis bv. Medievalis SCPM-O-B-6530, a Proline-Dependent Strain Isolated from the Central-Caucasian High-Mountain Plague Focus in Kabardino-Balkar Republic (Russia)
10.1128/mra.01115-21 · 2022 · External reference
Genome rearrangements and phylogeny reconstruction in Yersinia pestis
10.7717/peerj.4545 · 2018 · External reference
Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis
10.1073/pnas.0404012101 · 2004 · External reference
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Demarcation of the Boundaries of the Central Asian Desert Natural Focus of Plague of Kazakhstan and Monitoring the Areal of the Main Carrier, Rhombomys opimus
10.21055/0370-1069-2021-2-71-78 · 2021 · External reference
10.1007/978-3-031-58831-0
10.1007/978-3-031-58831-0 · 2024 · External reference
Historical Assessment and Mapping of Human Plague, Kazakhstan, 1926-2003
10.3201/eid3012.231659 · 2024 · External reference
Black death and the silver lining: meaning, continuity, and revolutionary change in histories of medieval plague
1991 · External reference
The black death and the future of the plague
10.17302/tmg.1-1.10 · 2015 · External reference
Pre-industrial plague transmission is mediated by the synergistic effect of temperature and aridity index
10.1186/s12879-018-3045-5 · 2018 · External reference
Outbreak of Human Pneumonic Plague with Dog-to-Human and Possible Human-to-Human Transmission--Colorado, June-July 2014
2015 · External reference
A frameshift in Yersinia pestis rcsD alters canonical Rcs signalling to preserve flea-mammal plague transmission cycles
2023 · External reference
CsrA-Mediated Translational Activation of the hmsE mRNA Enhances HmsD-Dependent C-di-GMP-Enabled Biofilm Production in Yersinia pestis
2023 · External reference
Silencing urease: a key evolutionary step that facilitated the adaptation of Yersinia pestis to the flea-borne transmission route
10.1073/pnas.1413209111 · 2014 · External reference
Unresolved reference
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Distinct clones of Yersinia pestis caused the black death
10.1371/journal.ppat.1001134 · 2010 · External reference
Analysis of genetic variability of Yersinia pestis strains (medieval biovar) isolated in natural plague foci of the Russian Federation and Mongolia
10.21055/0370-1069-2012-4-49-53 · 2012 · External reference
Genetic basis of the variability of nitrate reduction trait in Yersinia pestis strains
2014 · External reference
Genetic variability of Yersinia pestis isolates as predicted by PCR-based IS100 genotyping and analysis of structural genes encoding glycerol-3-phosphate dehydrogenase (glpD)
10.1128/jb.184.4.1019-1027.2002 · 2002 · External reference
Functional characterization of Yersinia pestis aerobic glycerol metabolism
10.1016/j.micpath.2014.08.010 · 2014 · External reference
Intraspecific diversity of Yersinia pestis
10.1128/cmr.17.2.434-464.2004 · 2004 · External reference
Diversity in a variable-number tandem repeat from Yersinia pestis
10.1128/jcm.38.4.1516-1519.2000 · 2000 · External reference
Tandem repeats analysis for the high resolution phylogenetic analysis of Yersinia pestis
10.1186/1471-2180-4-22 · 2004 · External reference
YpfΦ: a filamentous phage acquired by Yersinia pestis
10.3389/fmicb.2014.00701 · 2014 · External reference
Filamentous bacteriophages and their role in the virulence and evolution of pathogenic bacteria
10.3103/s0891416815010036 · 2015 · External reference
Analysis of the Nucleotide Sequence of a Cryptic Plasmid from Yersinia pestis Strains in the Central Caucasian High-Mountain Plague Focus
2015 · External reference
Rapid diagnostic tests for plague
2019 · External reference
Retrospective analysis of dissemination of the 2.MED1 phylogenetic branch of Yersinia pestis in the Caucasus
10.1371/journal.pone.0283670 · 2023 · External reference
Multilevel System of Studying Plague Microbe Strains Proprties in the Republic of Kazakhstan
10.21055/0370-1069-2022-4-23-28 · 2023 · External reference
Molecular characterization of L-413C, a P2-related plague diagnostic bacteriophage
10.1016/j.virol.2007.10.032 · 2008 · External reference
Unresolved reference
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Unresolved reference
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Unresolved reference
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Unresolved reference
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Probable Inference, the Law of Succession, and Statistical Inference
10.1080/01621459.1927.10502953 · 1927 · External reference
Longitudinal Study of Bacterial Infectious Agents in a Community of Small Mammals in New Mexico
10.1089/vbz.2019.2550 · 2020 · External reference
Biochemical and genetic peculiarities and the phylogenetic relationship of the non-main subspecies in the general scheme of the plague agent evolution
10.1007/978-1-4614-3561-7_6 · 2012 · External reference
Yersinia pestis strains of ancient phylogenetic branch 0.ANT are widely spread in the high-mountain plague foci of Kyrgyzstan
10.1371/journal.pone.0187230 · 2017 · External reference
Structural and functional analysis of araN gene in the Yersinia pestis strains of various origin
2009 · External reference
Nineteen Whole-Genome Assemblies of Yersinia pestis subsp. microtus, Including Representatives of Biovars caucasica, talassica, hissarica, altaica, xilingolensis, and ulegeica
10.1128/genomea.01342-15 · 2015 · External reference
A study of the nucleotide sequence variability of rha locus genes of Yersinia pestis main and non-main subspecies
2008 · External reference
CRISPR elements in Yersinia pestis acquire new repeats by preferential uptake of bacteriophage DNA, and provide additional tools for evolutionary studies
10.1099/mic.0.27437-0 · 2005 · External reference
Genotyping of Yersinia pestis.
10.1007/978-981-10-7947-4_5 · 2018 · External reference
Global evolutionary patterns of Yersinia pestis and its spread into Africa
2024 · External reference
A TALE of transposition: Tn3-like transposons play a major role in the spread of pathogenicity determinants of Xanthomonas citri and other xanthomonads
10.1128/mbio.02505-14 · 2015 · External reference
Genome-wide Mycobacterium tuberculosis variation (GMTV) database: a new tool for integrating sequence variations and epidemiology
10.1186/1471-2164-15-308 · 2014 · External reference
Whole-genome sequencing-based analysis of antimicrobial resistance, virulence factors, and genetic diversity in Yersinia isolated in Wenzhou, China 2020
10.1016/j.ympev.2023.107903 · 2023 · External reference
Genus-wide Yersinia core-genome multilocus sequence typing for species identification and strain characterization
2019 · External reference
Comparative sequence analysis elucidates the evolutionary patterns of Yersinia pestis in New Mexico over thirty-two years
10.7717/peerj.16007 · 2023 · External reference
Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity
10.1038/ng.705 · 2010 · External reference
Genome sequence of the deep-rooted Yersinia pestis strain Angola reveals new insights into the evolution and pangenome of the plague bacterium
10.1128/jb.01518-09 · 2010 · External reference
Five Draft Genome Sequences of Historical Yersinia pestis Strains of Phylogroups 2.MED4 and 2.MED1 of the Medieval Biovar
10.1128/mra.00044-22 · 2022 · External reference
Climatically driven synchrony of gerbil populations allows large-scale plague outbreaks
2007 · External reference
Phenotypic and Molecular Genetic Characteristics of Yersinia pestis at an Emerging Natural Plague Focus, Junggar Basin, China
10.4269/ajtmh.17-0195 · 2018 · External reference
Potential corridors and barriers for plague spread in Central Asia
10.1186/1476-072x-12-49 · 2013 · External reference
Marmots and Yersinia pestis Strains in Two Plague Endemic Areas of Tien Shan Mountains
10.3389/fvets.2019.00207 · 2019 · External reference
Efficient tracing of global isolates of Yersinia pestis by restriction fragment length polymorphism analysis using three insertion sequences as probes
10.1128/jcm.02618-05 · 2006 · External reference
