Research graph
References from HaplotagLR: An efficient and configurable utility for haplotagging long reads. Local targets link to admitted publications; unresolved targets remain external evidence.
Unresolved reference
External reference
10.1038/nature11247
10.1038/nature11247 · External reference
A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
10.1371/journal.pgen.1000529 · 2009 · External reference
MaCH: using sequence and genotype data to estimate haplotypes and unobserved genotypes
10.1002/gepi.20533 · 2010 · External reference
A fast and flexible statistical model for large-scale population genotype data: applications to inferring missing genotypes and haplotypic phase
10.1086/502802 · 2006 · External reference
The importance of phase information for human genomics
10.1038/nrg2950 · 2011 · External reference
WhatsHap: fast and accurate read-based phasing
2016 · External reference
WhatsHap: Weighted Haplotype Assembly for Future-Generation Sequencing Reads
10.1089/cmb.2014.0157 · 2015 · External reference
Sequencing of human genomes with nanopore technology
10.1038/s41467-019-09637-5 · 2019 · External reference
Systematic review of next-generation sequencing simulators: computational tools, features and perspectives
2017 · External reference
Minimap2: pairwise alignment for nucleotide sequences
10.1093/bioinformatics/bty191 · 2018 · External reference
Read-based phasing of related individuals
10.1093/bioinformatics/btw276 · 2016 · External reference
Single-cell analysis of structural variations and complex rearrangements with tri-channel processing
10.1038/s41587-019-0366-x · 2020 · External reference
Landscape of allele-specific transcription factor binding in the human genome
10.1038/s41467-021-23007-0 · 2021 · External reference
AlleleSeq: analysis of allele-specific expression and binding in a network framework
10.1038/msb.2011.54 · 2011 · External reference
Haplotype-aware diplotyping from noisy long reads
10.1186/s13059-019-1709-0 · 2019 · External reference
Extensive sequencing of seven human genomes to characterize benchmark reference materials
10.1038/sdata.2016.25 · 2016 · External reference
A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data
10.1093/bioinformatics/btr509 · 2011 · External reference
PBSIM2: a simulator for long-read sequencers with a novel generative model of quality scores
10.1093/bioinformatics/btaa835 · 2021 · External reference
The Sequence Alignment/Map format and SAMtools
10.1093/bioinformatics/btp352 · 2009 · External reference
Cas9 targeted enrichment of mobile elements using nanopore sequencing
10.1038/s41467-021-23918-y · 2021 · External reference
