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References from BetaBuddy: An automated end-to-end computer vision pipeline for analysis of calcium fluorescence dynamics in β-cells. Local targets link to admitted publications; unresolved targets remain external evidence.
The unique cytoarchitecture of human pancreatic islets has implications for islet cell function
10.1073/pnas.0510790103 · 2006 · External reference
β-Cell Deficit and Increased β-Cell Apoptosis in Humans With Type 2 Diabetes
10.2337/diabetes.52.1.102 · 2003 · External reference
Quantitative analysis of cell composition and purity of human pancreatic islet preparations
10.1038/labinvest.2010.124 · 2010 · External reference
Selective β-Cell Loss and α-Cell Expansion in Patients with Type 2 Diabetes Mellitus in Korea
10.1210/jc.2002-020735 · 2003 · External reference
Type 1 diabetes
10.1016/s0140-6736(18)31320-5 · 2018 · External reference
The promise of stem cell-derived islet replacement therapy
2021 · External reference
Stimulatory responses in α- and β-cells by near-infrared (810 nm) photobiomodulation
10.1002/jbio.202100257 · 2022 · External reference
Calcium Signaling in ß-cell Physiology and Pathology: A Revisit
10.3390/ijms20246110 · 2019 · External reference
Metabolic regulation of calcium signaling in beta cells
2020 · External reference
KATP channels and islet hormone secretion: new insights and controversies
10.1038/nrendo.2013.166 · 2013 · External reference
Field evaluation of the enhanced MM3-COPRO ELISA test for the diagnosis of Fasciola hepatica infection in sheep
10.1371/journal.pone.0265569 · 2022 · External reference
The ImageJ ecosystem: Open-source software for image visualization, processing, and analysis
10.1002/pro.3993 · 2021 · External reference
Fiji: an open-source platform for biological-image analysis
10.1038/nmeth.2019 · 2012 · External reference
TrackMate: An open and extensible platform for single-particle tracking
2017 · External reference
YSMR: a video tracking and analysis program for bacterial motility
10.1186/s12859-020-3495-9 · 2020 · External reference
OrganoidTracker: Efficient cell tracking using machine learning and manual error correction
10.1371/journal.pone.0240802 · 2020 · External reference
A Python based automated tracking routine for myosin II filaments
10.1088/1361-6463/ab87bf · 2020 · External reference
Deep learning approaches to biomedical image segmentation
10.1016/j.imu.2020.100297 · 2020 · External reference
Automated Meningioma Segmentation in Multiparametric MRI
10.1007/s00062-020-00884-4 · 2021 · External reference
Automated Image Processing Workflow for Morphological Analysis of Fluorescence Microscopy Cell Images
10.1007/s11837-021-04707-w · 2021 · External reference
Split and merge watershed: A two-step method for cell segmentation in fluorescence microscopy images
10.1016/j.bspc.2019.101575 · 2019 · External reference
Segmentation of touching cell nuclei using gradient flow tracking
10.1111/j.1365-2818.2008.02016.x · 2008 · External reference
Applying watershed algorithms to the segmentation of clustered nuclei
10.1002/(sici)1097-0320(19970801)28:4<289::aid-cyto3>3.0.co;2-7 · 1997 · External reference
Deep Learning Automates the Quantitative Analysis of Individual Cells in Live-Cell Imaging Experiments
10.1371/journal.pcbi.1005177 · 2016 · External reference
10.1007/978-3-319-46976-8_3
10.1007/978-3-319-46976-8_3 · 2016 · External reference
10.1109/isbi.2017.7950532
10.1109/isbi.2017.7950532 · 2017 · External reference
10.1109/isbi.2019.8759242
10.1109/isbi.2019.8759242 · 2019 · External reference
10.1109/icobe.2012.6179016
10.1109/icobe.2012.6179016 · 2012 · External reference
Smart Markers for Watershed-Based Cell Segmentation
10.1371/journal.pone.0048664 · 2012 · External reference
Segmentation and tracking of migrating cells in videomicroscopy with parametric active contours: a tool for cell-based drug testing
10.1109/tmi.2002.806292 · 2002 · External reference
10.1109/iembs.2008.4649167
10.1109/iembs.2008.4649167 · 2008 · External reference
Cellpose: A generalist algorithm for cellular segmentation
10.1038/s41592-020-01018-x · 2021 · External reference
Unresolved reference
2018 · External reference
Unresolved reference
2016 · External reference
A survey on applications of deep learning in microscopy image analysis
10.1016/j.compbiomed.2021.104523 · 2021 · External reference
Deep Learning in Cell Image Analysis
2023 · External reference
3D FIB-SEM reconstruction of microtubule-organelle interaction in whole primary mouse β cells
10.1083/jcb.202010039 · 2021 · External reference
Integrated intracellular organization and its variations in human iPS cells
10.1038/s41586-022-05563-7 · 2023 · External reference
Cellpose 2.0: how to train your own model
10.1038/s41592-022-01663-4 · 2022 · External reference
A novel automated protocol for ice crystal segmentation analysis using Cellpose and Fiji
10.1016/j.cryobiol.2023.02.002 · 2023 · External reference
Deetect: A Deep Learning-Based Image Analysis Tool for Quantification of Adherent Cell Populations on Oxygenator Membranes after Extracorporeal Membrane Oxygenation Therapy
10.3390/biom12121810 · 2022 · External reference
Artificial intelligence workflow quantifying muscle features on Hematoxylin–Eosin stained sections reveals dystrophic phenotype amelioration upon treatment
10.1038/s41598-022-24139-z · 2022 · External reference
QuPath: Open source software for digital pathology image analysis
10.1038/s41598-017-17204-5 · 2017 · External reference
Automatic and unbiased segmentation and quantification of myofibers in skeletal muscle
10.1038/s41598-021-91191-6 · 2021 · External reference
HRMAn 2.0: Next-generation artificial intelligence–driven analysis for broad host–pathogen interactions
10.1111/cmi.13349 · 2021 · External reference
Altered β-cell calcium dynamics via electric field exposure
10.1007/s10439-020-02517-w · 2021 · External reference
Bringing TrackMate into the era of machine-learning and deep-learning
2021 · External reference
Pharmacological stimulation and inhibition of insulin secretion in mouse islets lacking ATP-sensitive K+ channels
10.1111/j.1476-5381.2009.00588.x · 2010 · External reference
Glucose-induced insulin secretion in isolated human islets: Does it truly reflect β-cell function in vivo?
10.1016/j.molmet.2021.101212 · 2021 · External reference
Mechanisms and Mitochondrial Redox Signaling in Photobiomodulation
10.1111/php.12864 · 2018 · External reference
Interplay between up-regulation of cytochrome-c-oxidase and hemoglobin oxygenation induced by near-infrared laser
10.1038/srep30540 · 2016 · External reference
Can photobiomodulation therapy (PBMT) control blood glucose levels and alter muscle glycogen synthesis
10.1016/j.jphotobiol.2020.111877 · 2020 · External reference
Beta Cell Hubs Dictate Pancreatic Islet Responses to Glucose
10.1016/j.cmet.2016.06.020 · 2016 · External reference
Gap junctions and other mechanisms of cell–cell communication regulate basal insulin secretion in the pancreatic islet
10.1113/jphysiol.2011.218909 · 2011 · External reference
Gap junctions: structure and function (Review)
10.1080/09687680210139839 · 2002 · External reference
Gap Junction Coupling and Calcium Waves in the Pancreatic Islet
10.1529/biophysj.108.140863 · 2008 · External reference