Research graph
References from Single-cell RNA sequencing of nc886, a non-coding RNA transcribed by RNA polymerase III, with a primer spike-in strategy. Local targets link to admitted publications; unresolved targets remain external evidence.
The noncoding RNA revolution-trashing old rules to forge new ones
10.1016/j.cell.2014.03.008 · 2014 · External reference
The Third Revolution in Sequencing Technology
10.1016/j.tig.2018.05.008 · 2018 · External reference
Landscape of transcription in human cells
10.1038/nature11233 · 2012 · External reference
A practical guide to single-cell RNA-sequencing for biomedical research and clinical applications.
10.1186/s13073-017-0467-4 · 2017 · External reference
The technological landscape and applications of single-cell multi-omics
10.1038/s41580-023-00615-w · 2023 · External reference
cellCounts: an R function for quantifying 10x Chromium single-cell RNA sequencing data
10.1093/bioinformatics/btad439 · 2023 · External reference
RNA Sequencing and Analysis.
10.1101/pdb.top084970 · 2015 · External reference
A comparison between ribo-minus RNA-sequencing and polyA-selected RNA-sequencing
10.1016/j.ygeno.2010.07.010 · 2010 · External reference
An RNA-Seq strategy to detect the complete coding and non-coding transcriptome including full-length imprinted macro ncRNAs.
10.1371/journal.pone.0027288 · 2011 · External reference
Novel Method of Full-Length RNA-seq That Expands the Identification of Non-Polyadenylated RNAs Using Nanopore Sequencing
10.1021/acs.analchem.2c01128 · 2022 · External reference
Effective detection of variation in single-cell transcriptomes using MATQ-seq.
10.1038/nmeth.4145 · 2017 · External reference
Single-cell quantification of a broad RNA spectrum reveals unique noncoding patterns associated with cell types and states
10.1073/pnas.2113568118 · 2021 · External reference
Complete Transcriptome Analysis by 5’-End Single-Cell RNA-Seq with Random Priming.
10.1007/978-1-0716-2281-0_11 · 2022 · External reference
The expanding RNA polymerase III transcriptome
10.1016/j.tig.2007.09.001 · 2007 · External reference
RNA polymerase III transcription as a disease factor
10.1101/gad.333989.119 · 2020 · External reference
nc886, an RNA Polymerase III-Transcribed Noncoding RNA Whose Expression Is Dynamic and Regulated by Intriguing Mechanisms.
2023 · External reference
Function and Therapeutic Implications of tRNA Derived Small RNAs.
10.3389/fmolb.2022.888424 · 2022 · External reference
Epigenetic regulation of RNA polymerase III transcription in early breast tumorigenesis
10.1038/onc.2017.285 · 2017 · External reference
Precursor miR-886, a novel noncoding RNA repressed in cancer, associates with PKR and modulates its activity
10.1261/rna.2701111 · 2011 · External reference
Mechanism mediated by a noncoding RNA, nc886, in the cytotoxicity of a DNA-reactive compound
10.1073/pnas.1814510116 · 2019 · External reference
SeqKit: A Cross-Platform and Ultrafast Toolkit for FASTA/Q File Manipulation.
10.1371/journal.pone.0163962 · 2016 · External reference
Multiplexed droplet single-cell RNA-sequencing using natural genetic variation
10.1038/nbt.4042 · 2018 · External reference
Comprehensive Integration of Single-Cell Data
10.1016/j.cell.2019.05.031 · 2019 · External reference
Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic Data.
10.1016/j.cels.2018.11.005 · 2019 · External reference
Controlled synthesis of HBsAg in a differentiated human liver carcinoma-derived cell line
10.1038/282615a0 · 1979 · External reference
A human prostatic stromal myofibroblast cell line WPMY-1: a model for stromal-epithelial interactions in prostatic neoplasia
10.1093/carcin/20.7.1185 · 1999 · External reference
High Yield Expression of Recombinant Human Proteins with the Transient Transfection of HEK293 Cells in Suspension.
2015 · External reference
HEK293 Cell Line as a Platform to Produce Recombinant Proteins and Viral Vectors.
10.3389/fbioe.2021.796991 · 2021 · External reference
Estrogens promote invasion of prostate cancer cells in a paracrine manner through up-regulation of matrix metalloproteinase 2 in prostatic stromal cells
10.1210/en.2010-1239 · 2011 · External reference
Single cell analysis of human foetal liver captures the transcriptional profile of hepatobiliary hybrid progenitors
10.1038/s41467-019-11266-x · 2019 · External reference
Purification of HCC-specific extracellular vesicles on nanosubstrates for early HCC detection by digital scoring.
10.1038/s41467-020-18311-0 · 2020 · External reference
BioGPS and MyGene.info: organizing online, gene-centric information
10.1093/nar/gks1114 · 2013 · External reference
Cross-tissue organization of the fibroblast lineage
10.1038/s41586-021-03549-5 · 2021 · External reference
Single-cell analysis reveals the pan-cancer invasiveness-associated transition of adipose-derived stromal cells into COL11A1-expressing cancer-associated fibroblasts.
10.1371/journal.pcbi.1009228 · 2021 · External reference
Current understanding of metal ions in the pathogenesis of Alzheimer’s disease.
10.1186/s40035-020-00189-z · 2020 · External reference
Mammalian Metallothionein-2A and Oxidative Stress.
2016 · External reference
Fatty-acid-induced FABP5/HIF-1 reprograms lipid metabolism and enhances the proliferation of liver cancer cells
10.1038/s42003-020-01367-5 · 2020 · External reference
Sphingosine kinase 1 regulates lipid metabolism to promote progression of kidney renal clear cell carcinoma
10.1016/j.prp.2023.154641 · 2023 · External reference
Human noncoding RNA 886 (nc886) adopts two structurally distinct conformers that are functionally opposing regulators of PKR.
10.1261/rna.060269.116 · 2017 · External reference
Characterization of the direct physical interaction of nc886, a cellular non-coding RNA, and PKR.
10.1016/j.febslet.2012.07.076 · 2012 · External reference
Full-length single-cell RNA-seq applied to a viral human cancer: applications to HPV expression and splicing analysis in HeLa S3 cells.
10.1186/s13742-015-0091-4 · 2015 · External reference
