References

Plant and insect viruses in managed and natural environments: novel and neglected transmission pathways

10.1016/bs.aivir.2018.02.006 · 2018 · External reference

The plant virus transmissions database

2024 · External reference

ICTV virus taxonomy profile: solemoviridae 2021

10.1099/jgv.0.001707 · 2021 · External reference

Rice yellow mottle virus in Africa: evolution, distribution, economic significance and sustainable rice production and management strategies

10.1300/j064v11n02_08 · 1997 · External reference

Characterization and ecological aspects of rice yellow mottle virus in Kenya

1974 · External reference

Evidence of non-transmission of rice yellow mottle virus through seeds of wild host species

2006 · External reference

Isolation of the rice yellow mottle virus in Ivory Coast

1977 · External reference

Rice yellow mottle virus is seed-borne but not seed transmitted in rice seeds

10.1023/a:1011295709393 · 2001 · External reference

Rice yellow mottle virus is transmitted by cows, donkeys, and grass rats in irrigated rice crops

10.1094/pdis.2003.87.7.804 · 2003 · External reference

A reassessment of the epidemiology of Rice yellow mottle virus following recent advances in field and molecular studies

10.1016/j.virusres.2009.01.011 · 2009 · External reference

10.1007/978-94-015-7701-4

10.1007/978-94-015-7701-4 · 1984 · External reference

Abiotic transmission of southern bean-mosaic virus in soil

10.1071/bi9860353 · 1986 · External reference

Rice seedbeds as a source of primary infection by Rice yellow mottle virus

10.1007/s10658-006-9004-9 · 2006 · External reference

Comparing patterns and scales of plant virus phylogeography: Rice yellow mottle virus in Madagascar and in continental Africa

10.1093/ve/vez023 · 2019 · External reference

Host ecology determines the dispersal patterns of a plant virus

10.1093/ve/vev016 · 2015 · External reference

10.4000/books.editionsmsh.9387

10.4000/books.editionsmsh.9387 · 2007 · External reference

Rice yellow mottle virus genus Sobemovirus: a continental problem in Africa

10.17221/1350-pps · 2004 · External reference

Unresolved reference

1986 · External reference

Unresolved reference

1982 · External reference

The long-range dispersal of plant viruses by arthropod vectors

10.1098/rstb.1983.0071 · 1983 · External reference

Bayesian phylogeography finds its roots

10.1371/journal.pcbi.1000520 · 2009 · External reference

Phylogeography takes a relaxed random walk in continuous space and time

10.1093/molbev/msq067 · 2010 · External reference

Rice yellow mottle virus, an RNA plant virus, evolves as rapidly as most RNA animal viruses

10.1128/jvi.02506-07 · 2008 · External reference

Revisiting the origins of the Sobemovirus genus: a case for ancient origins of plant viruses

10.1371/journal.ppat.1011911 · 2024 · External reference

The history of rice in Africa.

1978 · External reference

civilization and the swahili towns: anti-commodity and anti-state?.

10.1057/9781137381101_9 · 2016 · External reference

Riz.

1971 · External reference

Unresolved reference

1884 · External reference

Unresolved reference

1968 · External reference

Unresolved reference

External reference

Unresolved reference

2009 · External reference

Exploration of the Rufiji river under the orders of the Sultan of Zanzibar

1881 · External reference

10.1017/cbo9780511584114

10.1017/cbo9780511584114 · 1979 · External reference

Modeling the velocity of evolving lineages and predicting dispersal patterns

10.1073/pnas.2411582121 · 2024 · External reference

How fast are viruses spreading in the wild?

10.1371/journal.pbio.3002914 · 2024 · External reference

Unifying the spatial epidemiology and molecular evolution of emerging epidemics

10.1073/pnas.1206598109 · 2012 · External reference

Bayesian evaluation of temporal signal in measurably evolving populations

10.1093/molbev/msaa163 · 2020 · External reference

Phylogenetic evidence for deleterious mutation load in RNA viruses and its contribution to viral evolution

10.1093/molbev/msm001 · 2007 · External reference

Cassava brown streak virus evolves with a nucleotide-substitution rate that is typical for the family Potyviridae

10.1016/j.virusres.2024.199397 · 2024 · External reference

Inferring the evolutionary history of rice yellow mottle virus from genomic, phylogenetic, and phylogeographic studies

10.1128/jvi.78.7.3252-3261.2004 · 2004 · External reference

Accounting for spatial sampling patterns in Bayesian phylogeography

10.1073/pnas.2105273118 · 2021 · External reference

Sampling bias and model choice in continuous phylogeography: Getting lost on a random walk

10.1371/journal.pcbi.1008561 · 2021 · External reference

Split diversity in constrained conservation prioritization using integer linear programming

10.1111/2041-210x.12299 · 2015 · External reference

Rivers and landscape ecology of a plant virus, Rice yellow mottle virus along the Niger Valley

10.1093/ve/veab072 · 2021 · External reference

Genetic diversity and epidemic histories of rice yellow mottle virus in Ghana

2023 · External reference

Dynamics of the rice yellow mottle disease in western Burkina Faso: Epidemic monitoring, spatio-temporal variation of viral diversity and pathogenicity in a disease hotspot

10.1093/ve/vead049 · 2023 · External reference

The biogeography of viral emergence: rice yellow mottle virus as a case study

10.1016/j.coviro.2014.12.002 · 2015 · External reference

Unresolved reference

2003 · External reference

Tanzanie: l’Ujamaa et ses lendemains

1994 · External reference

Host range of rice yellow mottle virus in sudano-sahelian savannahs

10.3923/pjbs.2007.1414.1421 · 2007 · External reference

Complete genome sequence of a new strain of Rice yellow mottle virus from Malawi, characterized by a recombinant VPg protein

10.1128/genomea.01198-17 · 2017 · External reference

Historical contingencies modulate the adaptability of Rice yellow mottle virus

10.1371/journal.ppat.1002482 · 2012 · External reference

Ecosystem change in the South Pare Mountain bloc, Eastern Arc Mountains of Tanzania

10.1177/0959683616675937 · 2017 · External reference

Nyamwezi trade.

1970 · External reference

The central caravan route of Tanzania: a preliminary archaeological reconnaissance

2007 · External reference

Unresolved reference

1988 · External reference

Genomic analysis of the brassica pathogen turnip mosaic potyvirus reveals its spread along the former trade routes of the Silk Road

10.1073/pnas.2021221118 · 2021 · External reference

Unresolved reference

1913 · External reference

The northern interlacustrine region

1970 · External reference

Notes from East Africa: The Uluguru Mountains and the Rufiji Plain

10.2307/1780332 · 1917 · External reference

10.5479/sil.798767.39088017639576

10.5479/sil.798767.39088017639576 · 1920 · External reference

Norforce: Major general Edward Northey and the Nyasaland and northeastern Rhodesia frontier force, January 1916 to June 1918

2016 · External reference

Unresolved reference

1975 · External reference

The Kilwa–Nyasa caravan route the long-neglected trading corridor in southern Tanzania.

2017 · External reference

Unresolved reference

2018 · External reference

Unresolved reference

1971 · External reference

Unresolved reference

1997 · External reference

Unresolved reference

2019 · External reference

Unresolved reference

1939 · External reference

Vieilles agricultures de l’Afrique intertropicale

1950 · External reference

10.14375/np.9791026711506

10.14375/np.9791026711506 · 2023 · External reference

The Cauchy process on phylogenies: a tractable model for pulsed evolution

10.1093/sysbio/syad053 · 2023 · External reference

Movement of the A-strain maize streak virus in and out of Madagascar

10.1016/j.virol.2024.110222 · 2024 · External reference

On the importance of negative controls in viral landscape phylogeography

10.1093/ve/vey023 · 2018 · External reference

Maize streak virus: an old and complex “emerging” pathogen

10.1111/j.1364-3703.2009.00568.x · 2010 · External reference

Molecular identification and phylogenetic characterization of A-strain isolates of maize streak virus from western Ethiopia

10.1007/s00705-022-05614-4 · 2022 · External reference

First report of maize streak virus affecting maize in the Philippines

10.1002/ndr2.12302 · 2024 · External reference

Full-length genome sequences of recombinant and nonrecombinant sympatric strains of rice yellow mottle virus from western Kenya

10.1128/genomea.01508-17 · 2018 · External reference

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

10.1093/nar/22.22.4673 · 1994 · External reference

Seaview version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building

10.1093/molbev/msp259 · 2010 · External reference

Neighbor-net: an agglomerative method for the construction of phylogenetic networks

10.1093/molbev/msh018 · 2004 · External reference

RDP5: a computer program for analyzing recombination in, and removing signals of recombination from, nucleotide sequence datasets

10.1093/ve/veaa087 · 2020 · External reference

A simple and robust statistical test for detecting the presence of recombination

10.1534/genetics.105.048975 · 2006 · External reference

DnaSP 6: DNA sequence polymorphism analysis of large data sets

10.1093/molbev/msx248 · 2017 · External reference

Recombination, selection and clock-like evolution of Rice yellow mottle virus

10.1016/j.virol.2009.08.008 · 2009 · External reference

The effect of genetic structure on molecular dating and tests for temporal signal

10.1111/2041-210x.12466 · 2016 · External reference

TreeTime: maximum-likelihood phylodynamic analysis

10.1093/ve/vex042 · 2018 · External reference

Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10

10.1093/ve/vey016 · 2018 · External reference

BEAGLE: an application programming interface and high-performance computing library for statistical phylogenetics

10.1093/sysbio/syr100 · 2012 · External reference

Many-core algorithms for statistical phylogenetics

10.1093/bioinformatics/btp244 · 2009 · External reference

Relaxed phylogenetics and dating with confidence

10.1371/journal.pbio.0040088 · 2006 · External reference

Improving Bayesian population dynamics inference: a coalescent-based model for multiple loci

10.1093/molbev/mss265 · 2013 · External reference

Posterior summarization in bayesian phylogenetics using tracer 1.7

10.1093/sysbio/syy032 · 2018 · External reference

Bayesian regression analysis with scale mixtures of normals

10.1017/s0266466600161043 · 2000 · External reference

EvoLaps: a web interface to visualize continuous phylogeographic reconstructions

10.1186/s12859-021-04386-z · 2021 · External reference

EvoLaps 2: Advanced phylogeographic visualization

10.1093/ve/vead078 · 2023 · External reference

Phylogeography of Rice yellow mottle virus in Africa

10.1099/vir.0.18759-0 · 2003 · External reference