References

Assessing genetic diversity in clonal organisms: Low diversity or low resolution? Combining power and cost efficiency in selecting markers

10.1093/jhered/esi043 · 2005 · External reference

Standardizing methods to address clonality in population studies

10.1111/j.1365-294x.2007.03535.x · 2007 · External reference

Flea-borne rickettsioses: Ecologic considerations

10.3201/eid0303.970308 · 1997 · External reference

The population genetics of clonal and partially clonal diploids

10.1093/genetics/164.4.1635 · 2003 · External reference

The control of the false discovery rate in multiple testing under dependency

10.1214/aos/1013699998 · 2001 · External reference

Leishmania major and Trypanosoma lewisi infection in invasive and native rodents in Senegal

10.1371/journal.pntd.0006615 · 2018 · External reference

Phylogenetic analysis: model and estimation procedures

1967 · External reference

Microsatellite null alleles and estimation of population differentiation

10.1093/molbev/msl191 · 2007 · External reference

A clinical and epidemiological investigation of the first reported human infection with the zoonotic parasite Trypanosoma evansi in Southeast Asia

10.1093/cid/ciw052 · 2016 · External reference

create: a software to create input files from diploid genotypic data for 52 genetic software programs

10.1111/j.1471-8286.2007.02036.x · 2008 · External reference

Statistical decision from k test series with particular focus on population genetics tools: a DIY notice

10.1016/j.meegid.2014.01.005 · 2014 · External reference

Genetic identities and local inbreeding in pure diploid clones with homoplasic markers: SNPs may be misleading

10.1016/j.meegid.2015.05.008 · 2015 · External reference

Revisiting FIS, FST, Wahlund effects, and Null alleles

10.1093/jhered/esx106 · 2018 · External reference

Deceptive combined effects of short allele dominance and stuttering: an example with Ixodes scapularis, the main vector of Lyme disease in the U.S.A.

10.24072/pcjournal.34 · 2021 · External reference

MultiTest V.1.2, a program to binomially combine independent tests and performance comparison with other related methods on proportional data

10.1186/1471-2105-10-443 · 2009 · External reference

Non-Mendelian transmission of alleles at microsatellite loci: an example in Ixodes ricinus, the vector of Lyme disease

10.1016/j.ijpara.2004.04.006 · 2004 · External reference

Molecular epidemiology of clonal diploids: A quick overview and a short DIY (do it yourself) notice

10.1016/j.meegid.2005.02.004 · 2006 · External reference

Population genetics and molecular epidemiology or how to "débusquer la bête"

10.1016/j.meegid.2006.07.003 · 2007 · External reference

A simple procedure to detect, test for the presence of stuttering, and cure stuttered data with spreadsheet programs

10.24072/pcjournal.165 · 2022 · External reference

Spatio-temporal survey of small mammal-borne Trypanosoma lewisi in Cotonou, Benin, and the potential risk of human infection

10.1016/j.meegid.2019.103967 · 2019 · External reference

Molecular survey of rodent-borne Trypanosoma in Niger with special emphasis on T. lewisi imported by invasive black rats

10.1016/j.actatropica.2010.11.004 · 2011 · External reference

A fatal case of Trypanosoma lewisi in Maharashtra, India

10.4103/1755-6783.85759 · 2011 · External reference

The R commander: a basic statistics graphical user interface to R

10.18637/jss.v014.i09 · 2005 · External reference

Extending the R commander by "plug in" packages

2007 · External reference

FSTAT (Version 1.2): A computer program to calculate F-statistics

10.1093/oxfordjournals.jhered.a111627 · 1995 · External reference

Fstat (ver. 2.9.4), a program to estimate and test population genetics parameters. Updated from Goudet (1995)

2003 · External reference

Testing Differentiation in Diploid Populations

10.1093/genetics/144.4.1933 · 1996 · External reference

A standardized genetic differentiation measure

10.1111/j.0014-3820.2005.tb01814.x · 2005 · External reference

Unresolved reference

1972 · External reference

Diversity of trypanosomes in humans and cattle in the HAT foci Mandoul and Maro, Southern Chad-A matter of concern for zoonotic potential?

10.1371/journal.pntd.0009323 · 2021 · External reference

Population genetic structure of Guinea Trypanosoma brucei gambiense isolates according to host factors

10.1016/j.meegid.2011.04.011 · 2011 · External reference

Population genetics of Trypanosoma brucei gambiense, the agent of sleeping sickness in Western Africa

10.1073/pnas.0811080106 · 2009 · External reference

Fast sequence-based microsatellite genotyping development workflow

10.7717/peerj.9085 · 2020 · External reference

Resistance to normal human serum reveals Trypanosoma lewisi as an underestimated human pathogen

10.1016/j.molbiopara.2015.03.007 · 2015 · External reference

Detecting Wahlund effects together with amplification problems : cryptic species, null alleles and short allele dominance in Glossina pallidipes populations from Tanzania

10.1111/1755-0998.12989 · 2019 · External reference

QDD version 3.1: a user-friendly computer program for microsatellite selection and primer design revisited: experimental validation of variables determining genotyping success rate

10.1111/1755-0998.12271 · 2014 · External reference

Assessing population structure: FST and related measures

10.1111/j.1755-0998.2010.02927.x · 2011 · External reference

Guidelines for working with rodents potentially infected with hantavirus

10.2307/1382742 · 1995 · External reference

Estimation of fixation indices and gene diversities

10.1111/j.1469-1809.1983.tb00993.x · 1983 · External reference

Trypanosoma from rodents as potential source of infection in human-shaped landscapes of South-East Asia

10.1016/j.vetpar.2014.12.027 · 2015 · External reference

R: A Language and Environment for Statistical Computing, Version 3.6.3 (2020-02-29)

2020 · External reference

Landscape epidemiology in urban environments: The example of rodent-borne Trypanosoma in Niamey, Niger

10.1016/j.meegid.2017.10.006 · 2018 · External reference

The neighbor-joining method: a new method for reconstructing phylogenetic trees.

10.1093/oxfordjournals.molbev.a040454 · 1987 · External reference

Development of nine microsatellite loci for Trypanosoma lewisi, a potential human pathogen in Western Africa and South-East Asia, and preliminary population genetics analyses, Supplementary File S1

10.5281/zenodo.7234790 · 2022 · External reference

Null allele, allelic dropouts or rare sex detection in clonal organisms : simulations and application to real data sets of pathogenic microbes

10.1186/1756-3305-7-331 · 2014 · External reference

Guidelines of the American Society of Mammalogists for the use of wild mammals in research

10.1644/10-mamm-f-355.1 · 2011 · External reference

Genetic Distances and Reconstruction of Phylogenetic Trees From Microsatellite DNA

10.1093/genetics/144.1.389 · 1996 · External reference

Rodent-borne Trypanosoma from cities and villages of Niger and Nigeria: A special role for the invasive genus Rattus?

10.1016/j.actatropica.2017.03.027 · 2017 · External reference

On the power of some binomial modifications of the Bonferroni multiple test

2007 · External reference

Atypical human infections by animal trypanosomes

10.1371/journal.pntd.0002256 · 2013 · External reference

Trypanosoma brucei ssp. and T-congolense: mixed human infection in Cote d'Ivoire

10.1016/s0035-9203(98)90904-x · 1998 · External reference

Human Asian trypanosomiasis due to Trypanosoma evansi: a rare case

10.14737/journal.jap/2015/2.3.65.68 · 2015 · External reference

Does GST underestimate genetic differentiation from marker data?

10.1111/mec.13204 · 2015 · External reference

Estimating F-statistics for the analysis of population structure

10.1111/j.1558-5646.1984.tb05657.x · 1984 · External reference

The interpretation of population structure by F-statistics with special regard to system of mating

10.1111/j.1558-5646.1965.tb01731.x · 1965 · External reference

Cell cycle and cleavage events during in vitro cultivation of bloodstream forms of Trypanosoma lewisi, a zoonotic pathogen

10.1080/15384101.2019.1577651 · 2019 · External reference