Research graph
References from Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study. Local targets link to admitted publications; unresolved targets remain external evidence.
The importance and application of the ancestral recombination graph
10.3389/fgene.2013.00206 · 2013 · External reference
A Fine-Scale Chimpanzee Genetic Map from Population Sequencing
10.1126/science.1216872 · 2012 · External reference
Recombination rate estimation in the presence of hotspots
10.1101/gr.6386707 · 2007 · External reference
Genetic Recombination Is Targeted towards Gene Promoter Regions in Dogs
10.1371/journal.pgen.1003984 · 2013 · External reference
Death of PRDM9 coincides with stabilization of the recombination landscape in the dog genome
10.1101/gr.124123.111 · 2011 · External reference
Repeated losses of PRDM9-directed recombination despite the conservation of PRDM9 across vertebrates
10.7554/elife.24133 · 2017 · External reference
PRDM9 Is a Major Determinant of Meiotic Recombination Hotspots in Humans and Mice
10.1126/science.1183439 · 2010 · External reference
Regulating double-stranded DNA break repair towards crossover or non-crossover during mammalian meiosis
10.1007/s10577-007-1140-3 · 2007 · External reference
The Recombination Landscape in Wild House Mice Inferred Using Population Genomic Data
10.1534/genetics.117.300063 · 2017 · External reference
Unraveling heterochromatin
10.1038/ng0302-241 · 2002 · External reference
Playing hide and seek with mammalian meiotic crossover hotspots
10.1016/j.tig.2007.03.014 · 2007 · External reference
Mammalian Meiotic Recombination: A Toolbox for Genome Evolution
10.1159/000452822 · 2016 · External reference
Justified chauvinism: advances in defining meiotic recombination through sperm typing
10.1016/j.tig.2004.02.006 · 2004 · External reference
Genome-Wide Fine-Scale Recombination Rate Variation in Drosophila melanogaster
10.1371/journal.pgen.1003090 · 2012 · External reference
Meiotic recombination hotspots - a comparative view
10.1111/tpj.12870 · 2015 · External reference
Contrasting Methods of Quantifying Fine Structure of Human Recombination
10.1146/annurev-genom-082908-150031 · 2010 · External reference
Recombination at Double-Strand Breaks and DNA Ends
10.1016/s1097-2765(01)00419-1 · 2001 · External reference
The variant call format and VCFtools
10.1093/bioinformatics/btr330 · 2011 · External reference
Evolution of recombination landscapes in diverging populations of bread wheat
10.1093/gbe/evab152 · 2021 · External reference
Effects of Demographic History on the Detection of Recombination Hotspots from Linkage Disequilibrium
10.1093/molbev/msx272 · 2017 · External reference
Accurate, scalable and integrative haplotype estimation
10.1038/s41467-019-13225-y · 2019 · External reference
fitdistrplus: An R Package for Fitting Distributions
10.18637/jss.v064.i04 · 2015 · External reference
Genome-wide recombination map construction from single individuals using linked-read sequencing
10.1038/s41467-019-12210-9 · 2019 · External reference
Biased Gene Conversion and the Evolution of Mammalian Genomic Landscapes
10.1146/annurev-genom-082908-150001 · 2009 · External reference
Determinants of genetic diversity
10.1038/nrg.2016.58 · 2016 · External reference
Singularity-Recipes: Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study. (v0.1.0) [Collection].
10.5281/zenodo.7657199 · External reference
PRDM9, a driver of the genetic map
10.1371/journal.pgen.1007479 · 2018 · External reference
Meta-analysis of chromosome-scale crossover rate variation in eukaryotes and its significance to evolutionary genomics
10.1111/mec.14699 · 2018 · External reference
The Genetic Architecture of Natural Variation in Recombination Rate in Drosophila melanogaster
10.1371/journal.pgen.1005951 · 2016 · External reference
Comparative Recombination Rates in the Rat, Mouse, and Human Genomes
10.1101/gr.1970304 · 2004 · External reference
Two-Locus Likelihoods Under Variable Population Size and Fine-Scale Recombination Rate Estimation
10.1534/genetics.115.184820 · 2016 · External reference
Efficient Coalescent Simulation and Genealogical Analysis for Large Sample Sizes
10.1371/journal.pcbi.1004842 · 2016 · External reference
Recombination and linkage disequilibrium in Arabidopsis thaliana
10.1038/ng2115 · 2007 · External reference
Comparative Mapping Between Coho Salmon (Oncorhynchus kisutch) and Three Other Salmonids Suggests a Role for Chromosomal Rearrangements in the Retention of Duplicated Regions Following a Whole Genome Duplication Event
10.1534/g3.114.012294 · 2014 · External reference
A high-resolution recombination map of the human genome
10.1038/ng917 · 2002 · External reference
Construction of multilocus genetic linkage maps in humans.
10.1073/pnas.84.8.2363 · 1987 · External reference
The Red Queen model of recombination hot-spot evolution: a theoretical investigation
10.1098/rstb.2016.0463 · 2017 · External reference
The Red Queen Model of Recombination Hotspots Evolution in the Light of Archaic and Modern Human Genomes
10.1371/journal.pgen.1004790 · 2014 · External reference
Modeling Linkage Disequilibrium and Identifying Recombination Hotspots Using Single-Nucleotide Polymorphism Data
10.1093/genetics/165.4.2213 · 2003 · External reference
A high-resolution map of non-crossover events reveals impacts of genetic diversity on mammalian meiotic recombination
10.1038/s41467-019-11675-y · 2019 · External reference
High-resolution mapping of meiotic crossovers and non-crossovers in yeast
10.1038/nature07135 · 2008 · External reference
The Fine-Scale Structure of Recombination Rate Variation in the Human Genome
10.1126/science.1092500 · 2004 · External reference
Meiotic recombination and genome evolution in plants
10.1016/j.pbi.2016.02.003 · 2016 · External reference
Population genomic and genome-wide association studies of agroclimatic traits in sorghum
10.1073/pnas.1215985110 · 2012 · External reference
The distribution and causes of meiotic recombination in the human genome
10.1042/bst0340526 · 2006 · External reference
A Fine-Scale Map of Recombination Rates and Hotspots Across the Human Genome
10.1126/science.1117196 · 2005 · External reference
Drive Against Hotspot Motifs in Primates Implicates the PRDM9 Gene in Meiotic Recombination
10.1126/science.1182363 · 2010 · External reference
Variation in recombination rate across the genome: evidence and implications
10.1016/s0959-437x(02)00358-1 · 2002 · External reference
Accelerated Evolution of the Prdm9 Speciation Gene across Diverse Metazoan Taxa
10.1371/journal.pgen.1000753 · 2009 · External reference
PRDM9 and Its Role in Genetic Recombination
10.1016/j.tig.2017.12.017 · 2018 · External reference
Prdm9 Controls Activation of Mammalian Recombination Hotspots
10.1126/science.1181495 · 2010 · External reference
From molecules to populations: appreciating and estimating recombination rate variation
10.1038/s41576-020-0240-1 · 2020 · External reference
Recombination initiation maps of individual human genomes
10.1126/science.1256442 · 2014 · External reference
How to interpret the inference of recombination landscapes on methods based on linkage disequilibrium?
10.24072/pci.genomics.100161 · 2023 · External reference
Lep-MAP3: robust linkage mapping even for low-coverage whole genome sequencing data
10.1093/bioinformatics/btx494 · 2017 · External reference
Performance_LD_methods_recombination: Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study. (v0.1.0) [Collection]
10.5281/zenodo.7657101 · 2023 · External reference
Supplementary Materials from: Performance and limitations of linkage-disequilibrium-based methods for inferring the genomic landscape of recombination and detecting hotspots: a simulation study. [Dataset]
10.5281/zenodo.7544555 · 2023 · External reference
Gene flow biases population genetic inference of recombination rate
10.1093/g3journal/jkac236 · 2022 · External reference
Snake Recombination Landscapes Are Concentrated in Functional Regions despite PRDM9
10.1093/molbev/msaa003 · 2020 · External reference
Divergent Fine-Scale Recombination Landscapes between a Freshwater and Marine Population of Threespine Stickleback Fish
10.1093/gbe/evz090 · 2019 · External reference
Stable recombination hotspots in birds
10.1126/science.aad0843 · 2015 · External reference
Inference and analysis of population-specific fine-scale recombination maps across 26 diverse human populations
10.1126/sciadv.aaw9206 · 2019 · External reference
Variation in recombination frequency and distribution across eukaryotes: patterns and processes
10.1098/rstb.2016.0455 · 2017 · External reference
The Time Scale of Recombination Rate Evolution in Great Apes
10.1093/molbev/msv331 · 2015 · External reference
Estimating recombination rates from population-genetic data
10.1038/nrg1227 · 2003 · External reference
Linked-read sequencing of gametes allows efficient genome-wide analysis of meiotic recombination
10.1038/s41467-019-12209-2 · 2019 · External reference
A second generation human haplotype map of over 3.1 million SNPs
10.1038/nature06258 · 2007 · External reference
Extreme Recombination Frequencies Shape Genome Variation and Evolution in the Honeybee, Apis mellifera
10.1371/journal.pgen.1005189 · 2015 · External reference
On the number of segregating sites in genetical models without recombination
10.1016/0040-5809(75)90020-9 · 1975 · External reference
