Research graph
References from Large-scale geography survey provides insights into the colonization history of a major aphid pest on its cultivated apple host in Europe, North America and North Africa. Local targets link to admitted publications; unresolved targets remain external evidence.
The oriental fruitfly Bactrocera dorsalis s.s. in East Asia: disentangling the different forces promoting the invasion and shaping the genetic make-up of populations
10.1007/s10709-014-9767-4 · 2014 · External reference
Basic local alignment search tool
10.1016/s0022-2836(05)80360-2 · 1990 · External reference
What Do We Really Know About Adaptation at Range Edges?
10.1146/annurev-ecolsys-012120-091002 · 2020 · External reference
Fruit tree Aphids and their natural enemies in Isparta region,Turkey
10.1007/s10340-005-0097-2 · 2005 · External reference
Evolution of Coalescence Times, Genetic Diversity and Structure during Colonization
10.1006/tpbi.1997.1302 · 1997 · External reference
IPM case studies: deciduous fruit tree aphids.
10.1079/9781780647098.0632 · 2007 · External reference
Indo-European origins: A computer-simulation test of five hypotheses
10.1002/ajpa.1330960202 · 1995 · External reference
Phylogenetic relationships of Dysaphis pyri (Boyer de Fonscolombe) and Dysaphis reaumuri (Mordvilko) (Hemiptera, Sternorrhyncha: Aphididae): COI and EF-1α evidence
10.1007/s13127-012-0095-1 · 2012 · External reference
ABC as a flexible framework to estimate demography over space and time: some cons, many pros
10.1111/j.1365-294x.2010.04690.x · 2010 · External reference
Unresolved reference
2000 · External reference
Founder effects and species introductions: A host versus parasite perspective
10.1111/eva.12868 · 2020 · External reference
Life history data of the rosy apple aphid Dysaphis plantaginea (Pass.) (Homopt., Aphididae) on plantain and as migrant to apple
10.1007/s10340-004-0046-5 · 2004 · External reference
Three roads diverged? Routes to phylogeographic inference
10.1016/j.tree.2010.08.010 · 2010 · External reference
Le puceron cendré du pommier (Dysaphis plantaginea Pass.). Morphologie et biologie. Méthodes de lutte
1959 · External reference
Worldwide Populations of the Aphid Aphis craccivora Are Infected with Diverse Facultative Bacterial Symbionts
10.1007/s00248-013-0314-0 · 2014 · External reference
10.1023/a:1010933404324
10.1023/a:1010933404324 · 2001 · External reference
Unresolved reference
1965 · External reference
Unresolved reference
2020 · External reference
Update on comparative genome mapping between Malus and Pyrus
10.1186/1756-0500-2-182 · 2009 · External reference
A young age of subspecific divergence in the desert locust inferred by ABC random forest
10.1111/mec.15663 · 2020 · External reference
Bayesian clustering algorithms ascertaining spatial population structure: a new computer program and a comparison study
10.1111/j.1471-8286.2007.01769.x · 2007 · External reference
Molecular phylogeny of Macrosiphini (Hemiptera: Aphididae): An evolutionary hypothesis for the Pterocomma-group habitat adaptation
10.1016/j.ympev.2017.12.021 · 2018 · External reference
A Multifaceted Overview of Apple Tree Domestication
10.1016/j.tplants.2019.05.007 · 2019 · External reference
Anthropogenic and natural drivers of gene flow in a temperate wild fruit tree: a basis for conservation and breeding programs in apples
10.1111/eva.12250 · 2015 · External reference
The domestication and evolutionary ecology of apples
10.1016/j.tig.2013.10.002 · 2014 · External reference
Description and Power Analysis of Two Tests for Detecting Recent Population Bottlenecks From Allele Frequency Data
10.1093/genetics/144.4.2001 · 1996 · External reference
abc: an R package for approximate Bayesian computation (ABC)
10.1111/j.2041-210x.2011.00179.x · 2012 · External reference
Approximate Bayesian Computation (ABC) in practice
10.1016/j.tree.2010.04.001 · 2010 · External reference
The effect of the Neolithic expansion on European molecular diversity
10.1098/rspb.2004.2999 · 2005 · External reference
Theade4Package: Implementing the Duality Diagram for Ecologists
10.18637/jss.v022.i04 · 2007 · External reference
Unresolved reference
2009 · External reference
Standard and generalized McDonald-Kreitman test: a website to detect selection by comparing different classes of DNA sites
10.1093/nar/gkn337 · 2008 · External reference
FROGS: Find, Rapidly, OTUs with Galaxy Solution
10.1093/bioinformatics/btx791 · 2018 · External reference
Reconstructing routes of invasion using genetic data: why, how and so what?
10.1111/j.1365-294x.2010.04773.x · 2010 · External reference
Model choice using Approximate Bayesian Computation and Random Forests: analyses based on model grouping to make inferences about the genetic history of Pygmy human populations
2018 · External reference
Detecting the number of clusters of individuals using the software structure: a simulation study
10.1111/j.1365-294x.2005.02553.x · 2005 · External reference
fastsimcoal: a continuous-time coalescent simulator of genomic diversity under arbitrarily complex evolutionary scenarios
10.1093/bioinformatics/btr124 · 2011 · External reference
Genetic Consequences of Range Expansions
10.1146/annurev.ecolsys.39.110707.173414 · 2009 · External reference
Arlequin suite ver 3.5: a new series of programs to perform population genetics analyses under Linux and Windows
10.1111/j.1755-0998.2010.02847.x · 2010 · External reference
Genetic origin and dispersal of the invasive soybean aphid inferred from population genetic analysis and approximate Bayesian computation
10.1111/1749-4877.12307 · 2018 · External reference
Biological and genetic features of introduced aphid populations in agroecosystems
10.1016/j.cois.2018.01.004 · 2018 · External reference
Gene Frequency Clines Produced by Kin-Structured Founder Effects
1997 · External reference
Europe as a bridgehead in the worldwide invasion history of grapevine downy mildew, Plasmopara viticola
10.1016/j.cub.2021.03.009 · 2021 · External reference
Adventive aphids (Hemiptera: Aphididae) of America north of Mexico
2006 · External reference
Symbionts protect aphids from parasitic wasps by attenuating herbivore-induced plant volatiles
10.1038/s41467-017-01935-0 · 2017 · External reference
Microbial symbionts of herbivorous species across the insect tree
10.1016/bs.aiip.2020.04.002 · 2020 · External reference
Deciphering the routes of invasion of Drosophila suzukii by means of ABC random forest
10.1093/molbev/msx050 · External reference
pophelper: an R package and web app to analyse and visualize population structure
10.1111/1755-0998.12509 · 2016 · External reference
Demographic History of European Populations of Arabidopsis thaliana
10.1371/journal.pgen.1000075 · 2008 · External reference
Statistical Tests of Neutrality of Mutations Against Population Growth, Hitchhiking and Background Selection
10.1093/genetics/147.2.915 · 1997 · External reference
Complex patterns of global spread in invasive insects: eco-evolutionary and management consequences
10.1007/s10530-016-1082-9 · 2016 · External reference
Detection of reduction in population size using data from microsatellite loci
10.1046/j.1365-294x.2001.01190.x · 2001 · External reference
Bacterial Communities Associated with Host-Adapted Populations of Pea Aphids Revealed by Deep Sequencing of 16S Ribosomal DNA
10.1371/journal.pone.0120664 · 2015 · External reference
Unresolved reference
2020 · External reference
Soybean aphid biotype 1 genome: Insights into the invasive biology and adaptive evolution of a major agricultural pest
10.1016/j.ibmb.2020.103334 · 2020 · External reference
The population biology of fungal invasions
10.1111/mec.13028 · 2015 · External reference
Fungal evolutionary genomics provides insight into the mechanisms of adaptive divergence in eukaryotes
10.1111/mec.12631 · 2014 · External reference
An evaluation of genetic distances for use with microsatellite loci.
10.1093/genetics/139.1.463 · 1995 · External reference
Weak Spatial and Temporal Population Genetic Structure in the Rosy Apple Aphid, Dysaphis plantaginea, in French Apple Orchards
10.1371/journal.pone.0021263 · 2011 · External reference
spagedi: a versatile computer program to analyse spatial genetic structure at the individual or population levels
10.1046/j.1471-8286.2002.00305.x · 2002 · External reference
Genetic clues to the origin of the apple
10.1016/s0168-9525(02)02689-6 · 2002 · External reference
Diversity of Bacteria Associated with Natural AphidPopulations
10.1128/aem.69.12.7216-7223.2003 · 2003 · External reference
Insect life history and the evolution of bacterial mutualism
10.1111/ele.12425 · 2015 · External reference
Phylogeography’s past, present, and future: 10 years after Avise, 2000
10.1016/j.ympev.2009.09.016 · 2010 · External reference
Biological invasions and natural colonisations: are they that different?
10.3897/neobiota.29.6959 · 2016 · External reference
10.1007/978-1-4020-8286-3
10.1007/978-1-4020-8286-3 · 2009 · External reference
MRBAYES: Bayesian inference of phylogenetic trees
10.1093/bioinformatics/17.8.754 · 2001 · External reference
CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
10.1093/bioinformatics/btm233 · 2007 · External reference
Unresolved reference
2015 · External reference
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
10.1186/1471-2156-11-94 · 2010 · External reference
Assessment of a 16S rRNA amplicon Illumina sequencing procedure for studying the microbiome of a symbiont-rich aphid genus
10.1111/1755-0998.12478 · 2016 · External reference
Fine-scale cospeciation between Brachycaudus and Buchnera aphidicola : bacterial genome helps define species and evolutionary relationships in aphids
10.1098/rspb.2008.0679 · 2009 · External reference
About the aphid fauna (Homoptera Aphididae) of West Tien-Shan (Kazakhstan part)
2002 · External reference
The computer program STRUCTURE does not reliably identify the main genetic clusters within species: simulations and implications for human population structure
10.1038/hdy.2010.95 · 2011 · External reference
Population genetics of the soybean aphid in North America and East Asia: test for introduction between native and introduced populations
10.1007/s10530-016-1299-7 · 2016 · External reference
Molecular genetics and genomics generate new insights into invertebrate pest invasions
10.1111/eva.12071 · 2013 · External reference
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
10.1128/aem.01043-13 · 2013 · External reference
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
10.1093/molbev/msw054 · 2016 · External reference
Ecological genetics of invasive alien species
10.1007/s10526-011-9386-2 · 2011 · External reference
A Link Between Communities of Protective Endosymbionts and Parasitoids of the Pea Aphid Revealed in Unmanipulated Agricultural Systems
10.3389/fevo.2021.618331 · 2021 · External reference
Diversity in symbiont consortia in the pea aphid complex is associated with large phenotypic variation in the insect host
10.1007/s10682-016-9856-1 · 2016 · External reference
Endosymbionts facilitate rapid evolution in a polyphagous herbivore
10.1111/jeb.13697 · 2020 · External reference
Spatial genetic structure of a tropical understory shrub, PSYCHOTRIA OFFICINALIS (RuBIACEAE)
10.1002/j.1537-2197.1995.tb12679.x · 1995 · External reference
Complementarity of statistical treatments to reconstruct worldwide routes of invasion: the case of the Asian ladybirdHarmonia axyridis
10.1111/mec.12989 · 2014 · External reference
The relative importance of short- and long-range movement of flying aphids
10.1111/j.1469-185x.1993.tb00998.x · 1993 · External reference
FLASH: fast length adjustment of short reads to improve genome assemblies
10.1093/bioinformatics/btr507 · 2011 · External reference
Swarm: robust and fast clustering method for amplicon-based studies
10.7717/peerj.593 · 2014 · External reference
Cutadapt removes adapter sequences from high-throughput sequencing reads
10.14806/ej.17.1.200 · 2011 · External reference
Adaptive protein evolution at the Adh locus in Drosophila
10.1038/351652a0 · 1991 · External reference
genotype and genodive: two programs for the analysis of genetic diversity of asexual organisms
10.1111/j.1471-8286.2004.00770.x · External reference
Synthetic Maps of Human Gene Frequencies in Europeans
10.1126/science.356262 · 1978 · External reference
Taxonomic Classification of Bacterial 16S rRNA Genes Using Short Sequencing Reads: Evaluation of Effective Study Designs
10.1371/journal.pone.0053608 · 2013 · External reference
Contrasting population structure and demographic history of cereal aphids in different environmental and agricultural landscapes
10.1002/ece3.6565 · 2020 · External reference
10.7312/nei-92038
10.7312/nei-92038 · 1987 · External reference
Facultative Symbionts in Aphids and the Horizontal Transfer of Ecologically Important Traits
10.1146/annurev-ento-112408-085305 · 2009 · External reference
Host range expansion of an introduced insect pest through multiple colonizations of specialized clones
10.1111/j.1365-294x.2008.03949.x · 2008 · External reference
Regular or covert sex defines two lineages and worldwide superclones within the leaf-curl plum aphid (Brachycaudus helichrysi, Kaltenbach)
10.1111/mec.12371 · 2013 · External reference
Computer note. BOTTLENECK: a computer program for detecting recent reductions in the effective size using allele frequency data
10.1093/jhered/90.4.502 · 1999 · External reference
Large-scale phylogeographic study of the cosmopolitan aphid pestBrachycaudus helichrysireveals host plant associated lineages that evolved in allopatry
10.1111/bij.12869 · 2016 · External reference
Intraspecific gene genealogies: trees grafting into networks
10.1016/s0169-5347(00)02026-7 · 2001 · External reference
Inference of Population Structure Using Multilocus Genotype Data
10.1534/genetics.116.195164 · 2000 · External reference
Geography predicts neutral genetic diversity of human populations
10.1016/j.cub.2005.02.038 · 2005 · External reference
Reliable ABC model choice via random forests
10.1093/bioinformatics/btv684 · 2016 · External reference
The programstructuredoes not reliably recover the correct population structure when sampling is uneven: subsampling and new estimators alleviate the problem
10.1111/1755-0998.12512 · 2016 · External reference
ABC random forests for Bayesian parameter inference
10.1093/bioinformatics/bty867 · 2019 · External reference
Reconstructing the macroevolutionary patterns of aphids (Hemiptera: Aphididae) using nuclear and mitochondrial DNA sequences
10.1093/biolinnean/blx020 · 2017 · External reference
The R Project in Statistical Computing
10.11120/msor.2001.01010023 · 2001 · External reference
The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest
10.1186/s12915-020-00820-5 · 2020 · External reference
How important is intraspecific genetic admixture to the success of colonising populations?
10.1016/j.tree.2014.02.003 · 2014 · External reference
VSEARCH: a versatile open source tool for metagenomics
10.7717/peerj.2584 · 2016 · External reference
genepop’007: a complete re-implementation of the genepop software for Windows and Linux
10.1111/j.1471-8286.2007.01931.x · 2008 · External reference
Inferring the mode of origin of polyploid species from next-generation sequence data
10.1111/mec.13078 · 2015 · External reference
DnaSP 6: DNA Sequence Polymorphism Analysis of Large Data Sets
10.1093/molbev/msx248 · 2017 · External reference
Uncovering symbiont-driven genetic diversity across North American pea aphids
10.1111/mec.12211 · 2013 · External reference
Ecology and evolution of sex in aphids
10.1016/s0169-5347(01)02331-x · 2002 · External reference
Evolutionary and functional insights into reproductive strategies of aphids
10.1016/j.crvi.2010.03.003 · 2010 · External reference
Deciphering host-parasitoid interactions and parasitism rates of crop pests using DNA metabarcoding
10.1038/s41598-019-40243-z · 2019 · External reference
Origins of the Apple: The Role of Megafaunal Mutualism in the Domestication of Malus and Rosaceous Trees
10.3389/fpls.2019.00617 · 2019 · External reference
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
10.1093/bioinformatics/btu033 · 2014 · External reference
Aphids of the genus Dysaphis Börner (Homoptera, Aphididae) living on plants of the family polygonaceae
10.1134/s0013873806070049 · 2006 · External reference
The Role of Hybridization in the Evolution and Emergence of New Fungal Plant Pathogens
10.1094/phyto-08-15-0184-rvw · 2016 · External reference
The Origins of Plant Pathogens in Agro-Ecosystems
10.1146/annurev.phyto.010708.154114 · 2008 · External reference
ADZE: a rarefaction approach for counting alleles private to combinations of populations
10.1093/bioinformatics/btn478 · 2008 · External reference
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.
10.1093/genetics/123.3.585 · 1989 · External reference
Ethnobotany of the crab apple tree (Malus sylvestris (L.) Mill., Rosaceae) in Spain
10.1007/s10722-020-01026-y · 2021 · External reference
Diversity and geographic distribution of secondary endosymbiotic bacteria in natural populations of the pea aphid, Acyrthosiphon pisum
10.1046/j.1365-294x.2002.01606.x · 2002 · External reference
The eco-evolutionary impacts of domestication and agricultural practices on wild species
10.1098/rstb.2016.0033 · 2017 · External reference
New insights from fine-scale spatial genetic structure analyses in plant populations
10.1046/j.1365-294x.2004.02076.x · 2004 · External reference
Environmentally related patterns of reproductive modes in the aphidMyzus persicaeand the predominance of two ‘superclones’ in Victoria, Australia
10.1046/j.1365-294x.2003.01998.x · 2003 · External reference
High Spatial Genetic Structure and Genetic Diversity in Chinese Populations ofSitobion miscanthi(Hemiptera: Aphididae)
10.1093/jee/tov294 · 2015 · External reference
Acibenzolar-S-Methyl Reprograms Apple Transcriptome Toward Resistance to Rosy Apple Aphid
10.3389/fpls.2018.01795 · 2018 · External reference
On the number of segregating sites in genetical models without recombination
10.1016/0040-5809(75)90020-9 · 1975 · External reference
The homozygosity test of neutrality
10.1093/genetics/88.2.405 · 1978 · External reference
ABCtoolbox: a versatile toolkit for approximate Bayesian computations
10.1186/1471-2105-11-116 · 2010 · External reference
Migration and population genetics of the grain aphid Macrosiphum miscanti (Takahashi) in relation to the geographic distance and gene flow*
10.1080/10020070512331343176 · 2005 · External reference
Estimating F-Statistics for the Analysis of Population Structure
10.2307/2408641 · 1984 · External reference
The influence of feeding of the rosy apple aphid, Dysaphis plantaginea (Pass.) (Homoptera: Aphididae) on the growth of apple fruits
1993 · External reference
Evolution of Rosaceae Fruit Types Based on Nuclear Phylogeny in the Context of Geological Times and Genome Duplication
10.1093/molbev/msw242 · 2017 · External reference
The invasion route for an insect pest species: the tobacco aphid in the New World
10.1111/j.1365-294x.2010.04857.x · 2010 · External reference
Low bacterial community diversity in two introduced aphid pests revealed with 16S rRNA amplicon sequencing
10.7717/peerj.4725 · 2018 · External reference
A multi-genome analysis approach enables tracking of the invasion of a single Russian wheat aphid (Diuraphis noxia) clone throughout the New World
10.1111/mec.12714 · 2014 · External reference
Invasion Genetics of Woolly Apple Aphid (Hemiptera: Aphididae) in China
10.1093/jee/tov074 · 2015 · External reference
The natural occurrence of secondary bacterial symbionts in aphids
10.1111/een.12281 · 2015 · External reference
