Research graph
References from Phenotype control and elimination of variables in Boolean networks. Local targets link to admitted publications; unresolved targets remain external evidence.
Integer programming-based approach to attractor detection and control of boolean networks
10.1587/transinf.e95.d.2960 · 2012 · External reference
Reducing Boolean networks with backward equivalence
10.1186/s12859-023-05326-9 · 2023 · External reference
Causal reasoning on Boolean control networks based on abduction: theory and application to cancer drug discovery
10.1109/tcbb.2018.2889102 · 2018 · External reference
Disclosing effects of Boolean network reduction on dynamical properties and control strategies
10.24072/pci.mcb.100318 · 2024 · External reference
Control strategy identification via trap spaces in Boolean networks
10.1007/978-3-030-60327-4_9 · 2020 · External reference
Control in Boolean networks with model checking
10.3389/fams.2022.838546 · 2022 · External reference
The logical analysis of continuous, non-linear biochemical control networks
10.1016/0022-5193(73)90208-7 · 1973 · External reference
A meta-analysis of Boolean network models reveals design principles of gene regulatory networks
10.1126/sciadv.adj0822 · 2024 · External reference
Minimal intervention strategies in logical signaling networks with ASP
10.1017/s1471068413000422 · 2013 · External reference
Approximating attractors of Boolean networks by iterative CTL model checking
10.3389/fbioe.2015.00130 · 2015 · External reference
Computational Complexity of Minimal Trap Spaces in Boolean Networks
10.48550/arxiv.2212.12756 · 2022 · External reference
A reduction of logical regulatory graphs preserving essential dynamical properties
10.1007/978-3-642-03845-7_18 · 2009 · External reference
Dynamically consistent reduction of logical regulatory graphs
10.1016/j.tcs.2010.10.021 · 2011 · External reference
Linear cuts in Boolean networks
10.1007/s11047-023-09945-2 · 2023 · External reference
10.24072/pcjournal.255 · 2023 · Admitted local publication
Reconciling qualitative, abstract, and scalable modeling of biological networks
10.1038/s41467-020-18112-5 · 2020 · External reference
Phenotype control techniques for Boolean gene regulatory networks
10.1007/s11538-023-01197-6 · 2023 · External reference
Review and assessment of Boolean approaches for inference of gene regulatory networks
10.1016/j.heliyon.2022.e10222 · 2022 · External reference
Tackling Universal Properties of Minimal Trap Spaces of Boolean Networks
10.1007/978-3-031-42697-1_11 · 2023 · External reference
Computing combinatorial intervention strategies and failure modes in signaling networks
10.1089/cmb.2009.0121 · 2010 · External reference
10.1016/j.csbj.2020.03.001 · 2020 · Admitted local publication
Reduction for asynchronous Boolean networks: elimination of negatively autoregulated components
10.46298/dmtcs.10930 · 2024 · External reference
Control of intracellular molecular networks using algebraic methods
10.1007/s11538-019-00679-w · 2020 · External reference
A dynamics-based approach for the target control of Boolean networks
10.1145/3388440.3412464 · 2020 · External reference
Sequential temporary and permanent control of Boolean networks
10.1007/978-3-030-60327-4_13 · 2020 · External reference
Attractor identification in asynchronous Boolean dynamics with network reduction
10.1007/978-3-031-42697-1_14 · 2023 · External reference
Minimal trap spaces of Logical models are maximal siphons of their Petri net encoding
10.1007/978-3-031-15034-0_8 · 2022 · External reference
Reduction of Boolean network models
10.1016/j.jtbi.2011.08.042 · 2011 · External reference
Steady state analysis of Boolean molecular network models via model reduction and computational algebra
10.1186/1471-2105-15-221 · 2014 · External reference
Cell Fate Reprogramming by Control of Intracellular Network Dynamics
10.1371/journal.pcbi.1004193 · 2015 · External reference
An effective network reduction approach to find the dynamical repertoire of discrete dynamic networks
10.1063/1.4809777 · 2013 · External reference
