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References from The quasi-universality of nestedness in the structure of quantitative plant-parasite interactions. Local targets link to admitted publications; unresolved targets remain external evidence.
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Tracking costs of virulence in natural populations of the wheat pathogen, Puccinia striiformis f.sp.tritici
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Specialization for resistance in wild host-pathogen interaction networks
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Genome-Wide Association Studies In Plant Pathosystems: Toward an Ecological Genomics Approach
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The nested assembly of plant-animal mutualistic networks
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Susceptibility of Algerian pepper cultivars (Capsicum annuum L) to Phytophthora capsici strains from different geographic areas
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Fast unfolding of communities in large networks
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NBS-LRR-mediated resistance triggered by aphids: viruses do not adapt; aphids adapt via different mechanisms
10.1186/s12870-016-0708-5 · 2016 · External reference
How specificity and epidemiology drive the coevolution of static trait diversity in hosts and parasites
10.1111/evo.12393 · 2014 · External reference
Durable Resistance of Crops to Disease: A Darwinian Perspective
10.1146/annurev-phyto-102313-045914 · 2015 · External reference
Plant-Parasite Coevolution: Bridging the Gap between Genetics and Ecology
10.1146/annurev-phyto-072910-095301 · 2011 · External reference
Nested species subsets, gaps, and discrepancy
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The jack of all trades is master of none: a pathogen's ability to infect a greater number of host genotypes comes at a cost of delayed reproduction
10.1111/evo.12461 · 2014 · External reference
Aggressiveness of eight Venturia inaequalis isolates virulent or avirulent to the major resistance gene Rvi6 on a non-Rvi6 apple cultivar
10.1111/j.1365-3059.2010.02345.x · 2010 · External reference
Erosion of quantitative host resistance in the apple ×Venturia inaequalis pathosystem
10.1016/j.meegid.2014.02.003 · 2014 · External reference
Slow erosion of a quantitative apple resistance to Venturia inaequalis based on an isolate-specific Quantitative Trait Locus
10.1016/j.meegid.2016.07.016 · 2016 · External reference
Selection and parasite evolution: a reproductive fitness cost associated with virulence in the parthenogenetic nematode Meloidogyne incognita
10.1007/s10682-006-9003-5 · 2006 · External reference
Finding community structure in very large networks
10.1103/physreve.70.066111 · 2004 · External reference
Adaptation of a plant pathogen to partial host resistance: selection for greater aggressiveness in grapevine downy mildew
10.1111/eva.12368 · 2016 · External reference
Increase in Zucchini yellow mosaic virus Symptom Severity in Tolerant Zucchini Cultivars Is Related to a Point Mutation in P3 Protein and Is Associated with a Loss of Relative Fitness on Susceptible Plants
10.1094/phyto.2003.93.12.1478 · 2003 · External reference
Identifying Causes of Patterns in Ecological Networks: Opportunities and Limitations
10.1146/annurev-ecolsys-110316-022928 · 2017 · External reference
Identifying the Molecular Basis of Host-Parasite Coevolution: Merging Models and Mechanisms
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Heterogeneity in ecological mutualistic networks dominantly determines community stability
10.1038/srep05912 · 2014 · External reference
Inverse‐Gene‐for‐Gene Infection Genetics and Coevolutionary Dynamics
10.1086/645087 · 2009 · External reference
Two-step infection processes can lead to coevolution between functionally independent infection and resistance pathways
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The Complementary Genic Systems in Flax and Flax Rust
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Statistical structure of host-phage interactions
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Multi-scale structure and geographic drivers of cross-infection within marine bacteria and phages
10.1038/ismej.2012.135 · 2013 · External reference
Adaptation to resistant hosts increases fitness on susceptible hosts in the plant parasitic nematodeGlobodera pallida
10.1002/ece3.2079 · 2016 · External reference
Rapid Genetic Diversification and High Fitness Penalties Associated with Pathogenicity Evolution in a Plant Virus
10.1093/molbev/msq327 · 2011 · External reference
Weighted-Interaction Nestedness Estimator (WINE): A new estimator to calculate over frequency matrices
10.1016/j.envsoft.2009.05.014 · 2009 · External reference
Evolution of Compatibility Range in the Rice−Magnaporthe oryzae System: An Uneven Distribution of R Genes Between Rice Subspecies
10.1094/phyto-07-15-0169-r · 2016 · External reference
Role of the Genetic Background in Resistance to Plant Viruses
10.3390/ijms19102856 · 2018 · External reference
Plant–parasite coevolution: A weak signature of local adaptation between Peruvian Globodera pallida populations and wild potatoes
10.1002/ece3.6248 · 2020 · External reference
Evidence for a Minor Gene–for–Minor Gene Interaction Explaining Nonhypersensitive Polygenic Partial Disease Resistance
10.1094/phyto-03-12-0056-r · 2012 · External reference
Unresolved reference
External reference
Mate Selection and the Evolution of Highly Polymorphic Self/Nonself Recognition Genes
10.1126/science.289.5487.2111 · 2000 · External reference
Fitness cost of virulence differs between the AvrLm1 and AvrLm4 loci in Leptosphaeria maculans (phoma stem canker of oilseed rape)
10.1007/s10658-009-9539-7 · 2010 · External reference
Coevolution and Hierarchical Interactions of Tomato mosaic virus and the Resistance Gene Tm-1
10.1371/journal.ppat.1002975 · 2012 · External reference
A Point Mutation in the Polymerase ofPotato virus YConfers Virulence Toward thePvr4Resistance of Pepper and a High Competitiveness Cost in Susceptible Cultivar
10.1094/mpmi-23-6-0823 · 2010 · External reference
A fitness cost for Turnip mosaic virus to overcome host resistance
10.1016/s0168-1702(02)00031-x · 2002 · External reference
Factors Determining Nestedness in Complex Networks
10.1371/journal.pone.0074025 · 2013 · External reference
Reciprocal specialization in ecological networks
10.1111/j.1461-0248.2009.01341.x · 2009 · External reference
Fitness penalty in susceptible host is associated with virulence ofSoybean mosaic virusonRsv1-genotype soybean: a consequence of perturbation of HC-Pro and not P3
10.1111/mpp.12054 · 2013 · External reference
The Red Queen Process does not Select for High Recombination Rates in Haplodiploid Hosts
10.1007/s11692-012-9221-4 · 2013 · External reference
Unresolved reference
External reference
Efficiency of pyramiding of three quantitative resistance loci to apple scab
10.1111/ppa.12581 · 2016 · External reference
Dissecting the Genetic Architecture of Host–Pathogen Specificity
10.1371/journal.ppat.1001019 · 2010 · External reference
Pathogen fitness penalty as a predictor of durability of disease resistance genes
10.1146/annurev.phyto.39.1.187 · 2001 · External reference
Isolate specificity of quantitative trait loci for partial resistance of barley to Puccinia hordei confirmed in mapping populations and near‐isogenic lines
10.1111/j.1469-8137.2007.02298.x · 2008 · External reference
Virus adaptation to quantitative plant resistance: erosion or breakdown?
10.1111/j.1420-9101.2012.02600.x · 2012 · External reference
Fitness costs associated with unnecessary virulence factors and life history traits: evolutionary insights from the potato late blight pathogen Phytophthora infestans
10.1186/1471-2148-10-283 · 2010 · External reference
The Relationship of Host Range, Physiology, and Genotype to Virulence on Cantaloupe in Pseudomonas syringae from Cantaloupe Blight Epidemics in France
10.1094/phyto.2000.90.6.636 · 2000 · External reference
The overlapping continuum of host range among strains in the Pseudomonas syringae complex
10.1186/s42483-018-0010-6 · 2019 · External reference
Revisiting the Concept of Host Range of Plant Pathogens
10.1146/annurev-phyto-082718-100034 · 2019 · External reference
Inferring the Evolutionary History of the Plant Pathogen Pseudomonas syringae from Its Biogeography in Headwaters of Rivers in North America, Europe, and New Zealand
10.1128/mbio.00107-10 · 2010 · External reference
Finding community structure in networks using the eigenvectors of matrices
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Finding and evaluating community structure in networks
10.1103/physreve.69.026113 · 2004 · External reference
Evidence of Differential Interaction in the Polygenic Hordeum vulgare-Puccinia hordei Relation during Epidemic Development
10.1094/phyto-67-776 · 1977 · External reference
Algorithm AS 159: An Efficient Method of Generating Random R × C Tables with Given Row and Column Totals
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Nested subsets and the structure of insular mammalian faunas and archipelagos
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Genetics of Variable Disease Expression Conferred by Inverse Gene-For-Gene Interactions in the Wheat-Parastagonospora nodorum Pathosystem
10.1104/pp.19.00149 · 2019 · External reference
Computing Communities in Large Networks Using Random Walks
10.7155/jgaa.00124 · 2006 · External reference
WhyRice yellow mottle virus, a rapidly evolving RNA plant virus, is not efficient at breakingrymv1-2resistance
10.1111/j.1364-3703.2009.00582.x · 2010 · External reference
Aggressiveness of Diverse French Aphanomyces euteiches Isolates on Pea Near Isogenic Lines Differing in Resistance Quantitative Trait Loci
10.1094/phyto-04-20-0147-r · 2021 · External reference
Genetic and Pathogenicity Diversity of Aphanomyces euteiches Populations From Pea-Growing Regions in France
10.3389/fpls.2018.01673 · 2018 · External reference
Near linear time algorithm to detect community structures in large-scale networks
10.1103/physreve.76.036106 · 2007 · External reference
Statistical mechanics of community detection
10.1103/physreve.74.016110 · 2006 · External reference
The evolution of virulence and pathogenicity in plant pathogen populations
10.1111/j.1364-3703.2007.00460.x · 2008 · External reference
Wheat receptor-kinase-like protein Stb6 controls gene-for-gene resistance to fungal pathogen Zymoseptoria tritici
10.1038/s41588-018-0051-x · 2018 · External reference
Host-parasite coevolution in a multilocus gene-for-gene system
10.1098/rspb.2000.1267 · 2000 · External reference
Interactions of Tomato and Botrytis cinerea Genetic Diversity: Parsing the Contributions of Host Differentiation, Domestication, and Pathogen Variation
10.1105/tpc.18.00857 · 2019 · External reference
The ghost of nestedness in ecological networks
10.1038/ncomms2422 · 2013 · External reference
Emergence of structural and dynamical properties of ecological mutualistic networks
10.1038/nature12438 · 2013 · External reference
Spatial heterogeneity, frequency-dependent selection and polymorphism in host-parasite interactions
10.1186/1471-2148-11-319 · 2011 · External reference
Epidemiological and Evolutionary Outcomes in Gene-for-Gene and Matching Allele Models
10.3389/fpls.2015.01084 · 2016 · External reference
Community detection in networks with positive and negative links
10.1103/physreve.80.036115 · 2009 · External reference
Spatially induced nestedness in a neutral model of phage-bacteria networks
10.1093/ve/vex021 · 2017 · External reference
The architecture of mutualistic networks as an evolutionary spandrel
10.1038/s41559-017-0383-4 · 2018 · External reference
Predicting durability of a disease resistance gene based on an assessment of the fitness loss and epidemiological consequences of avirulence gene mutation
10.1073/pnas.250271997 · 2000 · External reference
Two-way mixed-effects methods for joint association analysis using both host and pathogen genomes
10.1073/pnas.1710980115 · 2018 · External reference
Phage–bacteria infection networks
10.1016/j.tim.2012.11.003 · 2013 · External reference
Effector Genes ofXanthamonas axonopodispv.vesicatoriaPromote Transmission and Enhance Other Fitness Traits in the Field
10.1534/genetics.166.2.693 · 2004 · External reference
A small secreted protein in Zymoseptoria tritici is responsible for avirulence on wheat cultivars carrying the Stb6 resistance gene
10.1111/nph.14434 · 2017 · External reference
