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References from Diel changes in the expression of a marker gene and candidate genes for intracellular amorphous CaCO3 biomineralization in Microcystis. Local targets link to admitted publications; unresolved targets remain external evidence.
Cyanobacterial calcification and its rock-building potential during 3.5 billion years of Earth history
10.1111/j.1472-4669.2006.00076.x · 2006 · External reference
CO2 concentrating mechanisms in cyanobacteria: molecular components, their diversity and evolution
10.1093/jxb/erg076 · 2003 · External reference
The structures of the CutA1 proteins from<span class="italique">Thermus thermophilus</span>and<span class="italique">Pyrococcus horikoshii</span>: characterization of metal-binding sites and metal-induced assembly
10.1107/s2053230x14003422 · 2014 · External reference
A New Gene Family Diagnostic for Intracellular Biomineralization of Amorphous Ca Carbonates by Cyanobacteria
10.1093/gbe/evac026 · 2022 · External reference
Quantitative mapping of calcium cell reservoirs in cyanobacteria at the submicrometer scale
10.1016/j.elspec.2023.147369 · 2023 · External reference
Intracellular Ca-carbonate biomineralization is widespread in cyanobacteria
10.1073/pnas.1403510111 · 2014 · External reference
Impact of the cyanobacterium Gloeomargarita lithophora on the geochemical cycles of Sr and Ba
10.1016/j.chemgeo.2018.02.029 · 2018 · External reference
Amorphous Calcium Carbonate Granules Form Within an Intracellular Compartment in Calcifying Cyanobacteria
10.3389/fmicb.2018.01768 · 2018 · External reference
Biomineralization: an overview
10.1080/03008200390152007 · 2003 · External reference
Coccolithophore biomineralization: New questions, new answers
10.1016/j.semcdb.2015.10.027 · 2015 · External reference
Deciphering protein sequence information through hydrophobic cluster analysis (HCA): current status and perspectives
10.1007/s000180050082 · 1997 · External reference
Cyanobacterial formation of intracellular Ca-carbonates in undersaturated solutions
10.1111/gbi.12261 · 2018 · External reference
In vitro synthesis of amorphous Mg-, Ca-, Sr- and Ba-carbonates: What do we learn about intracellular calcification by cyanobacteria?
10.1016/j.gca.2015.04.003 · 2015 · External reference
Selective Uptake of Alkaline Earth Metals by Cyanobacteria Forming Intracellular Carbonates
10.1021/acs.est.6b02872 · 2016 · External reference
Carbonic anhydrase, coral calcification and a new model of stable isotope vital effects
10.1016/j.gca.2018.02.032 · 2018 · External reference
Structure of Pyrococcus horikoshii NikR: Nickel Sensing and Implications for the Regulation of DNA Recognition
10.1016/j.jmb.2005.03.017 · 2005 · External reference
Global proteome turnover analyses of the yeasts S. cerevisiae and S. pombe
10.1016/j.celrep.2014.10.065 · 2014 · External reference
Why do microbes make minerals?
10.5802/crgeos.107 · 2022 · External reference
An early-branching microbialite cyanobacterium forms intracellular carbonates
10.1126/science.1216171 · 2012 · External reference
GenoVi, an open-source automated circular genome visualizer for bacteria and archaea
10.1371/journal.pcbi.1010998 · 2023 · External reference
Evidence of high Ca uptake by cyanobacteria forming intracellular CaCO3 and impact on their growth
10.1111/gbi.12358 · 2019 · External reference
The genetic and ecophysiological diversity of Microcystis
10.1111/1462-2920.15615 · 2021 · External reference
Calcium binding proteins and calcium signaling in prokaryotes
10.1016/j.ceca.2014.12.006 · 2015 · External reference
Diel changes in the expression of a marker gene and candidate genes for intracellular amorphous CaCO3 biomineralization in Microcystis [Dataset v1]
10.5281/zenodo.14739956 · 2025 · External reference
DeepNOG: fast and accurate protein orthologous group assignment
10.1093/bioinformatics/btaa1051 · 2021 · External reference
Calculation of half-lives of proteins in vivo. Heterogeneity in the rate of degradation of yeast proteins
10.1007/bf00423096 · 1982 · External reference
AlphaFold2-guided description of CoBaHMA, a novel family of bacterial domains within the heavy-metal-associated superfamily
10.1002/prot.26668 · 2024 · External reference
Widespread formation of intracellular calcium carbonates by the bloom-forming cyanobacterium Microcystis
10.1111/1462-2920.16322 · 2023 · External reference
Biomineralization: Integrating mechanism and evolutionary history
10.1126/sciadv.abl9653 · 2022 · External reference
Effects of different metal ions (Ca, Cu, Pb, Cd) on formation of cyanobacterial blooms
10.1016/j.ecoenv.2019.109976 · 2020 · External reference
10.1007/s43939-020-00001-9 · 2020 · Admitted local publication
A review of the global ecology, genomics, and biogeography of the toxic cyanobacterium, Microcystis spp.
10.1016/j.hal.2015.12.007 · 2016 · External reference
CAX1, an H+/Ca2+ antiporter from Arabidopsis.
10.1073/pnas.93.16.8782 · 1996 · External reference
The circadian rhythms of photosynthesis, ATP content and cell division in Microcystisaeruginosa PCC7820
10.1007/s11738-014-1699-1 · 2014 · External reference
Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
10.1126/science.1168978 · 2009 · External reference
Biomineralization and evolutionary history
10.2113/0540329 · 2003 · External reference
Adapting from Low to High: An Update to CO2-Concentrating Mechanisms of Cyanobacteria and Microalgae
10.3390/plants12071569 · 2023 · External reference
DiCoExpress: a tool to process multifactorial RNAseq experiments from quality controls to co-expression analysis through differential analysis based on contrasts inside GLM models
10.1186/s13007-020-00611-7 · 2020 · External reference
The evolution of metazoan α-carbonic anhydrases and their roles in calcium carbonate biomineralization
10.1186/s12983-014-0075-8 · 2014 · External reference
Biomineralization patterns of intracellular carbonatogenesis in cyanobacteria: molecular hypotheses
10.3390/min6010010 · 2016 · External reference
A Novel Magnetotactic Alphaproteobacterium Producing Intracellular Magnetite and Calcium-Bearing Minerals
10.1128/aem.01556-21 · 2021 · External reference
Key gene networks that control magnetosome biomineralization in magnetotactic bacteria
10.1093/nsr/nwac238 · 2023 · External reference
FactoMineR: an R package for multivariate analysis
10.18637/jss.v025.i01 · 2008 · External reference
Expression of biomineralization-related ion transport genes in Emiliania huxleyi
10.1111/j.1462-2920.2011.02561.x · 2011 · External reference
Comparing bioinformatic gene expression profiling methods: microarray and RNA-Seq
10.12659/msmbr.892101 · 2014 · External reference
Skeletal matrices, muci, and the origin of invertebrate calcification.
10.1073/pnas.93.4.1554 · 1996 · External reference
Mucins and molluscan calcification: molecular characterization of mucoperlin, a novel mucin-like protein from the nacreous shell layer of the fan mussel Pinna nobilis (Bivalvia, pteriomorphia)
10.1074/jbc.m003006200 · 2000 · External reference
Molluscan shell proteins
10.1016/j.crpv.2004.07.009 · 2004 · External reference
Sequestration of radionuclides Radium-226 and Strontium-90 by cyanobacteria forming intracellular calcium carbonates
10.1021/acs.est.9b03982 · 2019 · External reference
Cyanobacteria Accumulate Radium (226Ra) within Intracellular Amorphous Calcium Carbonate Inclusions
10.1021/acsestwater.1c00473 · 2022 · External reference
Detection of biogenic amorphous calcium carbonate (ACC) formed by bacteria using FTIR spectroscopy
10.1016/j.saa.2022.121262 · 2022 · External reference
Calcium speciation and coordination environment in intracellular amorphous calcium carbonate (ACC) formed by cyanobacteria
10.1016/j.chemgeo.2023.121765 · 2023 · External reference
ColabFold: making protein folding accessible to all
10.1038/s41592-022-01488-1 · 2022 · External reference
Intracellular amorphous Ca-carbonate and magnetite biomineralization by a magnetotactic bacterium affiliated to the Alphaproteobacteria
10.1038/s41396-020-00747-3 · 2021 · External reference
Genomic study of a novel magnetotactic Alphaproteobacteria uncovers the multiple ancestry of magnetotaxis
10.1111/1462-2920.14364 · 2018 · External reference
Why marine phytoplankton calcify
10.1126/sciadv.1501822 · 2016 · External reference
Salmon provides fast and bias-aware quantification of transcript expression
10.1038/nmeth.4197 · 2017 · External reference
The cyanobacterial clock and metabolism
10.1016/j.mib.2014.02.010 · 2014 · External reference
InterPro in 2022
10.1093/nar/gkac993 · 2023 · External reference
UCSF Chimera—A visualization system for exploratory research and analysis
10.1002/jcc.20084 · 2004 · External reference
The cyanobacterial bicarbonate transporter BicA: its physiological role and the implications of structural similarities with human SLC26 transporters
10.1139/o10-136 · 2011 · External reference
16S rDNA-based analysis reveals cosmopolitan occurrence but limited diversity of two cyanobacterial lineages with contrasted patterns of intracellular carbonate mineralization
10.3389/fmicb.2014.00331 · 2014 · External reference
Protein synthesis rates and ribosome occupancies reveal determinants of translation elongation rates
10.1073/pnas.1817299116 · 2019 · External reference
Generic assignments, strain histories and properties of pure cultures of cyanobacteria
10.1099/00221287-111-1-1 · 1979 · External reference
Carbonate and Phosphate Precipitation by Chromohalobacter marismortui
10.1080/01490450500533882 · 2006 · External reference
Amorphous Ca-phosphate precursors for Ca-carbonate biominerals mediated by Chromohalobacter marismortui
10.1038/ismej.2010.17 · 2010 · External reference
A scaling normalization method for differential expression analysis of RNA-seq data
10.1186/gb-2010-11-3-r25 · 2010 · External reference
Changes in gene expression, cell physiology and toxicity of the harmful cyanobacterium Microcystis aeruginosa at elevated CO2
10.3389/fmicb.2015.00401 · 2015 · External reference
Global quantification of mammalian gene expression control
10.1038/nature10098 · 2011 · External reference
Identification of three distinct phylogenetic groups of CAX cation/proton antiporters
10.1007/s00239-006-0048-4 · 2006 · External reference
A day in the life of Microcystis aeruginosa strain PCC 7806 as revealed by a transcriptomic analysis
10.1371/journal.pone.0016208 · 2011 · External reference
Comparative Genomic Analysis Revealed Distinct Molecular Components and Organization of CO2-Concentrating Mechanism in Thermophilic Cyanobacteria
10.3389/fmicb.2022.876272 · 2022 · External reference
Recent advances in studies on magnetosome-associated proteins composing the bacterial geomagnetic sensor organelle
10.1111/1348-0421.13062 · 2023 · External reference
Magnetosome biogenesis in magnetotactic bacteria
10.1038/nrmicro.2016.99 · 2016 · External reference
Fast and accurate protein structure search with Foldseek
10.1038/s41587-023-01773-0 · 2023 · External reference
Halotolerant Cyanobacterium Aphanothece halophyticaContains an Na+/H+ Antiporter, Homologous to Eukaryotic Ones, with Novel Ion Specificity Affected by C-terminal Tail*
10.1074/jbc.m103650200 · 2001 · External reference
Isolation and Functional Characterization of Ca2+/H+ Antiporters from Cyanobacteria
10.1074/jbc.m310282200 · 2004 · External reference
Structural basis for alternating access of a eukaryotic calcium/proton exchanger
10.1038/nature12233 · 2013 · External reference
Calcium impacts carbon and nitrogen balance in the filamentous cyanobacterium Anabaena sp. PCC 7120
10.1093/jxb/erw112 · 2016 · External reference
RNA-Seq: a revolutionary tool for transcriptomics
10.1038/nrg2484 · 2009 · External reference
A Hard Day’s Night: cyanobacteria in diel cycles
10.1016/j.tim.2018.11.002 · 2019 · External reference
Widespread diminishing anthropogenic effects on calcium in freshwaters
10.1038/s41598-019-46838-w · 2019 · External reference
Intracellular calcite and sulfur dynamics of Achromatium cells observed in a lab-based enrichment and aerobic incubation experiment
10.1007/s10482-018-1153-2 · 2019 · External reference
Comparison of RNA-Seq and microarray in transcriptome profiling of activated T cells
10.1371/journal.pone.0078644 · 2014 · External reference
Choreography of the transcriptome, photophysiology, and cell cycle of a minimal photoautotroph, Prochlorococcus
10.1371/journal.pone.0005135 · 2009 · External reference