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References from Multiple Introductions and Cross-Sector Transmission of Salmonella e nterica Serovar Infantis Carrying bla CTX-M-65 Gene, South Korea, 2022–2024. Local targets link to admitted publications; unresolved targets remain external evidence.
The European Union One Health 2022 zoonoses report.
10.2903/j.efsa.2023.8442 · 2023 · External reference
Global monitoring of Salmonella serovar distribution from the World Health Organization Global Foodborne Infections Network Country Data Bank: results of quality assured laboratories from 2001 to 2007.
10.1089/fpd.2010.0787 · 2011 · External reference
Salmonella enterica serovar Infantis in broiler chickens: a systematic review and meta-analysis.
10.3390/ani14233453 · 2024 · External reference
A One Health perspective on Salmonella enterica serovar Infantis, an emerging human multidrug-resistant pathogen.
10.3201/eid3004.231031 · 2024 · External reference
A unique megaplasmid contributes to stress tolerance and pathogenicity of an emergent Salmonella enterica serovar Infantis strain.
10.1111/1462-2920.12351 · 2014 · External reference
Presence of extended-spectrum β-lactamase, CTX-M-65 in Salmonella enterica serovar Infantis isolated from children with diarrhea in Lima, Peru.
10.1055/s-0039-1685502 · 2019 · External reference
Comparative analysis of extended-spectrum-β-lactamase CTX-M-65–producing Salmonella enterica serovar Infantis isolates from humans, food animals, and retail chickens in the United States.
10.1128/aac.00488-17 · 2017 · External reference
Genomic characterisation of the population structure and antibiotic resistance of Salmonella enterica serovar Infantis in Chile, 2009–2022.
10.1016/j.lana.2024.100711 · 2024 · External reference
Trends in the serotype distribution of Salmonella enterica isolated from patients with diarrhea in the Republic of Korea from 2022 to 2024
10.56786/phwr.2025.18.45.2 · 2025 · External reference
Emergence and characteristics of multidrug-resistant Salmonella enterica subspecies enterica serovar Infantis harboring the pESI plasmid in chicken slaughterhouses in South Korea.
10.1128/spectrum.02955-24 · 2025 · External reference
Molecular epidemiology of pESI-carrying Salmonella Infantis in Korea: insights from a one health framework.
10.1080/22221751.2025.2565389 · 2025 · External reference
Unresolved reference
External reference
Trimmomatic: a flexible trimmer for Illumina sequence data.
10.1093/bioinformatics/btu170 · 2014 · External reference
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.
10.1089/cmb.2012.0021 · 2012 · External reference
Identification of acquired antimicrobial resistance genes.
10.1093/jac/dks261 · 2012 · External reference
Autocycler: long-read consensus assembly for bacterial genomes.
10.1093/bioinformatics/btaf474 · 2025 · External reference
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.
10.1371/journal.pcbi.1005595 · 2017 · External reference
Complete genome sequences and structural variants of pESI-like plasmids in multidrug-resistant Salmonella Infantis carrying blaCTX-M-65 from retail chicken meat in South Korea.
10.1016/j.jgar.2026.01.005 · 2026 · External reference
PHASTEST: faster than PHASTER, better than PHAST.
10.1093/nar/gkad382 · 2023 · External reference
MUMmer4: A fast and versatile genome alignment system.
10.1371/journal.pcbi.1005944 · 2018 · External reference
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins.
10.1093/nar/gku1196 · 2015 · External reference
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.
10.1093/molbev/msu300 · 2015 · External reference
FastTree 2—approximately maximum-likelihood trees for large alignments.
10.1371/journal.pone.0009490 · 2010 · External reference
Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen).
10.1093/ve/vew007 · 2016 · External reference
Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10.
10.1093/ve/vey016 · 2018 · External reference
ModelTest-NG: a new and scalable tool for the selection of DNA and protein evolutionary models.
10.1093/molbev/msz189 · 2020 · External reference
Improving marginal likelihood estimation for Bayesian phylogenetic model selection.
10.1093/sysbio/syq085 · 2011 · External reference
SpreaD3: interactive visualization of spatiotemporal history and trait evolutionary processes.
10.1093/molbev/msw082 · 2016 · External reference
Fast, accurate and simulation-free stochastic mapping.
10.1098/rstb.2008.0176 · 2008 · External reference
Emergence of multidrug-resistant Salmonella enterica subspecies enterica serovar Infantis of multilocus sequence type 2283 in German broiler farms.
10.3389/fmicb.2020.01741 · 2020 · External reference
Serotype distribution and antimicrobial resistance of Salmonella isolates in Korea between 2016 and 2017.
10.3343/alm.2022.42.2.268 · 2022 · External reference
Serotype distribution and antimicrobial resistance of Salmonella isolates in Seoul, 2020–2022.
10.4167/jbv.2023.53.2.131 · 2023 · External reference
A review of the global emergence of multidrug-resistant Salmonella enterica subsp. enterica serovar Infantis.
10.1016/j.ijfoodmicro.2023.110297 · 2023 · External reference
Antimicrobial resistance analysis and whole-genome sequencing of Salmonella isolates from environmental sewage—Guangzhou City, Guangdong Province, China, 2022–2023.
10.46234/ccdcw2024.050 · 2024 · External reference
Emergent Salmonella enterica serovar Infantis forms a monophyletic lineage shaped by geographic structuring.
10.1016/j.ijfoodmicro.2025.111536 · 2026 · External reference
Chromosome-borne CTX-M-65 extended-spectrum β-Lactamase–producing Salmonella enterica serovar Infantis, Taiwan.
10.3201/eid2908.230472 · 2023 · External reference
Clonal spread of blaCTX-M-65 producing Salmonella enterica serovars detected in poultry retail meat in North Carolina, USA.
10.1038/s41598-025-02972-2 · 2025 · External reference
Global spread of Salmonella Enteritidis via centralized sourcing and international trade of poultry breeding stocks.
10.1038/s41467-021-25319-7 · 2021 · External reference
Emergence of distinct Salmonella enterica serovar Enteritidis lineage since 2020, South Korea.
10.3201/eid3107.250043 · 2025 · External reference
Unresolved reference
External reference