Research graph
References from Genomic Epidemiology of Salmonella enterica Serovar Hadar Strain Linked to Poultry-Associated Salmonellosis Outbreaks, United States. Local targets link to admitted publications; unresolved targets remain external evidence.
Estimate of burden and direct healthcare cost of infectious waterborne disease in the United States.
10.3201/eid2701.190676 · 2021 · External reference
Foodborne illness acquired in the United States—major pathogens, 2019.
2025 · External reference
2017 Infectious Diseases Society of America Clinical practice guidelines for the diagnosis and management of infectious diarrhea.
10.1093/cid/cix669 · 2017 · External reference
Salmonellosis due to Salmonella typhimurium with Easter chicks as likely source.
10.1001/jama.1955.02960130007003 · 1955 · External reference
Multistate outbreaks of Salmonella infections associated with live poultry—United States, 2007.
2009 · External reference
Unresolved reference
External reference
Multistate outbreaks of salmonellosis linked to contact with backyard poultry—United States, 2015–2022.
10.1111/zph.13134 · 2024 · External reference
Salmonella Hadar linked to two distinct transmission vehicles highlights challenges to enteric disease outbreak investigations.
10.1017/s0950268824000682 · 2024 · External reference
Backyard poultry: exploring non-intensive production systems.
10.1016/j.psj.2023.103284 · 2024 · External reference
Preventing human Salmonella infections resulting from live poultry contact through interventions at retail stores.
10.13031/jash.12756 · 2018 · External reference
Distribution and diversity of Salmonella strains in shipments of hatchling poultry, United States, 2013.
10.1111/zph.12157 · 2015 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Pangenome dynamics and population structure of the zoonotic pathogen Salmonella enterica serotype Hadar.
10.1038/s41467-025-68026-3 · 2026 · External reference
Reoccurring, emerging, and persisting (REP) strains: a framework for surveillance and investigation of pathogens of public health importance.
10.1016/j.jfp.2026.100739 · 2026 · External reference
Molecular characterization of circulating Salmonella Typhi strains in an urban informal settlement in Kenya.
10.1371/journal.pntd.0010704 · 2022 · External reference
Reoccurring Escherichia coli O157:H7 strain linked to leafy greens–associated outbreaks, 2016–2019.
10.3201/eid2909.230069 · 2023 · External reference
CTX-M-65 extended-spectrum β-lactamase–producing Salmonella enterica serotype Infantis, United States.
10.3201/eid2412.180500 · 2018 · External reference
Investigations of possible multistate outbreaks of Salmonella, Shiga toxin–producing Escherichia coli, and Listeria monocytogenes infections—United States, 2016.
10.15585/mmwr.ss6906a1 · 2020 · External reference
Evaluation of whole and core genome multilocus sequence typing allele schemes for Salmonella enterica outbreak detection in a national surveillance network, PulseNet USA.
10.3389/fmicb.2023.1254777 · 2023 · External reference
Unresolved reference
External reference
A genomic overview of the population structure of Salmonella.
10.1371/journal.pgen.1007261 · 2018 · External reference
An overview of PulseNet USA databases.
10.1089/fpd.2019.2637 · 2019 · External reference
A computational genomics pipeline for prokaryotic sequencing projects.
10.1093/bioinformatics/btq284 · 2010 · External reference
A comparative analysis of the Lyve-SET phylogenomics pipeline for genomic epidemiology of foodborne pathogens.
10.3389/fmicb.2017.00375 · 2017 · External reference
BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis.
10.1371/journal.pcbi.1006650 · 2019 · External reference
Mashtree: a rapid comparison of whole genome sequence files.
10.21105/joss.01762 · 2019 · External reference
Bakta: rapid and standardized annotation of bacterial genomes via alignment-free sequence identification.
10.1099/mgen.0.000685 · 2021 · External reference
Roary: rapid large-scale prokaryote pan genome analysis.
10.1093/bioinformatics/btv421 · 2015 · External reference
Rapid scoring of genes in microbial pan-genome-wide association studies with Scoary.
10.1186/s13059-016-1108-8 · 2016 · External reference
BLAT—the BLAST-like alignment tool.
2002 · External reference
Crystal structure of YihS in complex with D-mannose: structural annotation of Escherichia coli and Salmonella enterica yihS-encoded proteins to an aldose–ketose isomerase.
10.1016/j.jmb.2008.01.090 · 2008 · External reference
Sulfoglycolysis: catabolic pathways for metabolism of sulfoquinovose.
10.1039/d1cs00846c · 2021 · External reference
The O-antigen capsule of Salmonella enterica serovar Typhimurium facilitates serum resistance and surface expression of FliC.
10.1128/iai.00634-15 · 2015 · External reference
Salmonella produces an O-antigen capsule regulated by AgfD and important for environmental persistence.
10.1128/jb.00809-06 · 2006 · External reference
Emergence of a novel Salmonella enterica serotype reading clonal group is linked to its expansion in commercial turkey production, resulting in unanticipated human illness in North America.
10.1128/msphere.00056-20 · 2020 · External reference
Backyard poultry flocks and salmonellosis: a recurring, yet preventable public health challenge.
10.1093/cid/ciu067 · 2014 · External reference
