Research graph
References from The transformative impact of ultra-rapid nanopore sequencing in precision medicine. Local targets link to admitted publications; unresolved targets remain external evidence.
Next-generation sequencing technology: current trends and advancements
10.3390/biology12070997 · 2023 · External reference
Sequencing technologies — the next generation
10.1038/nrg2626 · 2010 · External reference
The Oxford Nanopore MinION: delivery of nanopore sequencing to the genomics community
10.1186/s13059-016-1103-0 · 2016 · External reference
Nanopore sequencing technology, bioinformatics and applications
10.1038/s41587-021-01108-x · 2021 · External reference
Profiling the epigenome using long-read sequencing
10.1038/s41588-024-02038-5 · 2025 · External reference
Unresolved reference
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Toward same-day genome sequencing in the critical care setting
10.1056/nejmc2512825 · 2025 · External reference
Matching excellence: Oxford Nanopore Technologies’ rise to parity with Pacific Biosciences in genome reconstruction of non-model bacterium with high G+C content
10.1099/mgen.0.001316 · 2024 · External reference
Benchmarking reveals superiority of deep learning variant callers on bacterial nanopore sequence data
10.7554/elife.98300 · 2024 · External reference
An introduction to nanopore sequencing: past, present, and future considerations
10.3390/mi14020459 · 2023 · External reference
Unlocking the full potential of nanopore sequencing: tips, tricks, and advanced data analysis techniques
10.1093/nar/gkag023 · 2026 · External reference
Unresolved reference
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HLA/MHC and KIR characterization in humans and non-human primates using Oxford Nanopore Technologies and Pacific Biosciences sequencing platforms
10.1111/tan.14957 · 2023 · External reference
Complete sequences of six major histocompatibility complex haplotypes, including all the major MHC class II structures
10.1111/tan.15020 · 2023 · External reference
Piercing the dark matter: bioinformatics of long-range sequencing and mapping
10.1038/s41576-018-0003-4 · 2018 · External reference
Long-read human genome sequencing and its applications
10.1038/s41576-020-0236-x · 2020 · External reference
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
10.1038/s41587-020-0503-6 · 2020 · External reference
Nanopore sequencing data analysis using Microsoft Azure cloud computing service
10.17504/protocols.io.x54v9dj7pg3e/v1 · 2022 · External reference
Unresolved reference
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Exploring nanopore direct sequencing performance of forensic STRs, SNPs, InDels, and DNA methylation markers in a single assay
10.1016/j.fsigen.2024.103154 · 2025 · External reference
Targeted long-read sequencing identifies missing disease-causing variation
10.1016/j.ajhg.2021.06.006 · 2021 · External reference
Measuring X-chromosome inactivation skew for X-linked diseases with adaptive nanopore sequencing
10.1101/gr.279396.124 · 2024 · External reference
Implementation of nanopore sequencing as a pragmatic workflow for copy number variant confirmation in the clinic
10.1186/s12967-023-04243-y · 2023 · External reference
Clinical application of long-read nanopore sequencing in a preimplantation genetic testing pre-clinical workup to identify the junction for complex Xq chromosome rearrangement-related disease
10.1002/pd.6334 · 2023 · External reference
Rapid and comprehensive diagnostic method for repeat expansion diseases using nanopore sequencing
10.1038/s41525-022-00331-y · 2022 · External reference
Comprehensive genetic diagnosis of tandem repeat expansion disorders with programmable targeted nanopore sequencing
10.1126/sciadv.abm5386 · 2022 · External reference
Auditory neuropathy caused by a structural variation in the OTOF gene, identified using Oxford Nanopore adaptive sampling
10.3390/genes16020116 · 2025 · External reference
Adaptive sequencing using nanopores and deep learning of mitochondrial DNA
10.1093/bib/bbac251 · 2022 · External reference
Target enrichment long-read sequencing with adaptive sampling can determine the structure of the small supernumerary marker chromosomes
10.1038/s10038-021-01004-x · 2022 · External reference
Prospective, multicenter validation of a platform for rapid molecular profiling of central nervous system tumors
10.1038/s41591-025-03562-5 · 2025 · External reference
Nanopore adaptive sampling accurately detects nucleotide variants and improves the characterization of large-scale rearrangement for the diagnosis of cancer predisposition
10.1002/ctm2.70138 · 2025 · External reference
Assessing the efficacy of target adaptive sampling long-read sequencing through hereditary cancer patient genomes
10.1038/s41525-024-00394-z · 2024 · External reference
Real-time genomic characterization of pediatric acute leukemia using adaptive sampling
10.1038/s41375-025-02565-y · 2025 · External reference
Comprehensive pathogen identification and antimicrobial resistance prediction from positive blood cultures using nanopore sequencing technology
10.1186/s13073-024-01416-2 · 2024 · External reference
A rapid bacterial pathogen and antimicrobial resistance diagnosis workflow using Oxford nanopore adaptive sequencing method
10.1093/bib/bbac453 · 2022 · External reference
Optimizing nanopore adaptive sampling for pneumococcal serotype surveillance in complex samples using the graph-based GNASTy algorithm
10.1101/gr.279435.124 · 2025 · External reference
Evaluating methods for genome sequencing of Chlamydia trachomatis and other sexually transmitted bacteria directly from clinical swabs
10.1099/mgen.0.001353 · 2025 · External reference
NASCarD (Nanopore Adaptive Sampling with Carrier DNA): a rapid, PCR-free method for SARS-CoV-2 whole-genome sequencing in clinical samples
10.3390/pathogens13010061 · 2024 · External reference
Rapid PCR-based nanopore adaptive sequencing improves sensitivity and timeliness of viral clinical detection and genome surveillance
10.3389/fmicb.2022.929241 · 2022 · External reference
Combined nanopore adaptive sequencing and enzyme-based host depletion efficiently enriched microbial sequences and identified missing respiratory pathogens
10.1186/s12864-021-08023-0 · 2021 · External reference
Evaluation of microbiome enrichment and host DNA depletion in human vaginal samples using Oxford Nanopore’s adaptive sequencing
10.52843/cassyni.7gr4xs · 2022 · External reference
Rapid detection of PML::RARA fusions in acute promyelocytic leukemia: CRISPR/Cas9 nanopore sequencing with adaptive sampling
10.3390/biom14121595 · 2024 · External reference
Evolutionary basis of HLA-DPB1 alleles affects acute GVHD in unrelated donor stem cell transplantation
10.1182/blood-2017-08-801449 · 2018 · External reference
Optimizing access to unrelated donors in Canada: re-examining the importance of donor factors on outcomes following hematopoietic cell transplantation
10.3390/curroncol31050190 · 2024 · External reference
Donor killer-cell immunoglobulin-like receptor B haplotypes, recipient HLA-C1 and HLA-C mismatch enhance the clinical benefit of unrelated transplantation for acute myelogenous leukemia
10.4049/jimmunol.1302517 · 2014 · External reference
Killer Ig-like receptors (KIRs): their role in NK cell modulation and developments leading to their clinical exploitation
10.3389/fimmu.2019.01179 · 2019 · External reference
LILRB3 genetic variation is associated with kidney transplant failure in African American recipients
10.1038/s41591-025-03568-z · 2025 · External reference
Advancements in HLA typing techniques and their impact on transplantation medicine
10.1159/000538176 · 2024 · External reference
Long-read nanopore sequencing validated for human leukocyte antigen class I typing in routine diagnostics
10.1016/j.jmoldx.2020.04.001 · 2020 · External reference
Nanopore-targeted sequencing improves the diagnosis and treatment of patients with serious infections
10.1128/mbio.03055-22 · 2023 · External reference
Legionella pneumophila subspecies fraseri infection after allogeneic hematopoietic stem cell transplant, China
10.3201/eid2804.211433 · 2022 · External reference
Exploring a prolonged enterovirus C104 infection in a severely ill patient using nanopore sequencing
10.1093/ve/veab109 · 2022 · External reference
Genome Canada precision medicine strategy for structured national implementation of epitope matching in renal transplantation
10.1016/j.humimm.2022.01.002 · 2022 · External reference
Rapid high-resolution HLA genotyping by MinION Oxford nanopore sequencing for deceased donor organ allocation
10.1111/tan.13901 · 2020 · External reference
High resolution HLA genotyping with third generation sequencing technology-a multicentre study
10.1111/tan.15632 · 2024 · External reference
Rapid, highly accurate and cost-effective open-source simultaneous complete HLA typing and phasing of class I and II alleles using nanopore sequencing
10.1111/tan.13926 · 2020 · External reference
Genomic characterization of HLA class I and class II genes in ethnically diverse sub-Saharan African populations: a report on novel HLA alleles
10.1111/tan.15035 · 2023 · External reference
Characterization of a novel HLA-A*11:335 allele resulting from a rare interlocus recombination involving HLA-A*11:01:01:01/126 and HLA-H*02:07/14/18 alleles with nanopore sequencing, in a volunteer from the China Marrow Donor Program
10.1186/s12920-022-01176-1 · 2022 · External reference
High-resolution sequencing identifies a novel HLA allele: HLA-B*35:20:03
10.1007/978-3-031-15070-8_57 · 2024 · External reference
Characterization of the novel HLA-A*36:15 allele by next-generation sequencing and Oxford Nanopore technology
10.1111/tan.15765 · 2024 · External reference
The utilization of nanopore targeted sequencing proves to be advantageous in the identification of infections present in deceased donors
10.3389/fmicb.2023.1238666 · 2023 · External reference
Mixed infection of cytomegalovirus and pulmonary nocardiosis caused by Nocardia elegans diagnosed using nanopore sequencing technology
10.2169/internalmedicine.7639-21 · 2022 · External reference
Using nanopore whole-transcriptome sequencing for human leukocyte antigen genotyping and correlating donor human leukocyte antigen expression with flow cytometric crossmatch results
10.1016/j.jmoldx.2019.09.005 · 2020 · External reference
Ultrarapid and high-resolution HLA class I typing using transposase-based nanopore sequencing applied in pharmacogenetic testing
10.3389/fgene.2023.1213457 · 2023 · External reference
A multiplex pharmacogenetics assay using the MinION nanopore sequencing device
10.1097/fpc.0000000000000385 · 2019 · External reference
A nanopore sequencing-based pharmacogenomic panel to personalize tuberculosis drug dosing
10.1164/rccm.202309-1583oc · 2024 · External reference
Approach for phased sequence-based genotyping of the critical pharmacogene dihydropyrimidine dehydrogenase (DPYD)
10.3390/ijms25147599 · 2024 · External reference
Nanopore sequencing of the pharmacogene CYP2D6 allows simultaneous haplotyping and detection of duplications
10.1101/576280 · 2019 · External reference
Identification of drug transporter genomic variants and inhibitors that protect against doxorubicin-induced cardiotoxicity
10.1161/circulationaha.121.055801 · 2022 · External reference
Targeted haplotyping in pharmacogenomics using Oxford Nanopore Technologies’ adaptive sampling
10.3389/fphar.2023.1286764 · 2023 · External reference
Comparative evaluation of Oxford Nanopore Technologies’ adaptive sampling and the Twist long-read PGx panel for pharmacogenomic profiling
10.3389/fphar.2025.1653999 · 2025 · External reference
Unveiling novel genetic variants in 370 challenging medically relevant genes using the long read sequencing data of 41 samples from 19 global populations
10.1007/s00438-024-02158-x · 2024 · External reference
Haplotype sequence collection of ABO blood group alleles by long-read sequencing reveals putative A1-diagnostic variants
10.1182/bloodadvances.2022007133 · 2023 · External reference
Beyond HLA: An adaptive nanopore sequencing assay for simultaneous HLA and blood group profiling in transplantation
10.1016/j.humimm.2026.111710 · 2026 · External reference
Haplotypic resolution of the challenging genomic regions of MHC and KIR using a combination of targeted sequencing and a novel assembly pipeline
10.1093/nar/gkaf441 · 2025 · External reference
Unresolved reference
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Long-read sequencing for 29 immune cell subsets reveals disease-linked isoforms
10.1038/s41467-024-48615-4 · 2024 · External reference
Global mortality associated with 33 bacterial pathogens in 2019: a systematic analysis for the Global Burden of Disease Study 2019
10.1016/s0140-6736(22)02185-7 · 2022 · External reference
Real-time, portable genome sequencing for Ebola surveillance
10.1038/nature16996 · 2016 · External reference
A nested cohort 5-year Canadian surveillance of Gram-negative antimicrobial resistance for optimized antimicrobial therapy
10.1038/s41598-023-40012-z · 2023 · External reference
Characterization of Klebsiella pneumoniae carbapenemase (KPC)-14, a KPC variant conferring resistance to ceftazidime-avibactam in the extensively drug-resistant ST463 Pseudomonas aeruginosa clinical isolate
10.1016/j.jgar.2025.03.004 · 2025 · External reference
KPC variants conferring resistance to ceftazidime-avibactam in Pseudomonas aeruginosa strains
10.1016/j.micres.2024.127893 · 2024 · External reference
Investigation of ceftriaxone-resistant Neisseria gonorrhoeae detected in Scotland, 2018-2024
10.1136/sextrans-2024-056405 · 2025 · External reference
The point mutation A1387G in the 16S rRNA gene confers aminoglycoside resistance in Campylobacter jejuni and Campylobacter coli
10.1128/aac.00833-24 · 2024 · External reference
A One Health approach for the genomic characterization of antibiotic-resistant Campylobacter isolates using Nanopore whole-genome sequencing
10.3389/fmicb.2025.1540210 · 2025 · External reference
Detection of NDM-1/5 and OXA-48 co-producing extensively drug-resistant hypervirulent Klebsiella pneumoniae in Northern Italy
10.1016/j.jgar.2022.01.001 · 2022 · External reference
Development and comprehensive evaluation of culture-independent, long amplicon-based targeted next-generation sequencing methods for predicting antimicrobial resistance in tuberculosis
10.1021/acs.analchem.4c04166 · 2025 · External reference
Targeted sputum sequencing for rapid and broad drug resistance of Mycobacterium tuberculosis
10.1007/s15010-024-02463-y · 2025 · External reference
Potential of nanopore sequencing for tuberculosis diagnosis and drug resistance detection
10.1186/s12879-024-10378-0 · 2024 · External reference
Application of targeted next-generation sequencing assay on a portable sequencing platform for culture-free detection of drug-resistant tuberculosis from clinical samples
10.1128/jcm.00632-20 · 2020 · External reference
Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis
10.1186/s13073-015-0220-9 · 2015 · External reference
Streamlining whole genome sequencing for clinical diagnostics with ONT technology
10.1038/s41598-025-90127-8 · 2025 · External reference
Rapid inference of antibiotic susceptibility phenotype of uropathogens using metagenomic sequencing with neighbor typing
10.1128/spectrum.01366-24 · 2024 · External reference
Diverse new plasmid structures and antimicrobial resistance in strains isolated from perianal abscess patients
10.3389/fmicb.2024.1452795 · 2024 · External reference
The performance of nanopore sequencing in rapid detection of pathogens and antimicrobial resistance genes in blood cultures
10.1016/j.diagmicrobio.2025.116720 · 2025 · External reference
High intra-laboratory reproducibility of nanopore sequencing in bacterial species underscores advances in its accuracy
10.1099/mgen.0.001372 · 2025 · External reference
Contributions of long-read sequencing for the detection of antimicrobial resistance
10.3390/pathogens13090730 · 2024 · External reference
Evaluation of whole-genome sequencing protocols for detection of antimicrobial resistance, virulence factors and mobile genetic elements in antimicrobial-resistant bacteria
10.1099/jmm.0.001990 · 2025 · External reference
Culture and amplification-free nanopore sequencing for rapid detection of pathogens and antimicrobial resistance genes from urine
10.1007/s10096-024-04929-1 · 2024 · External reference
Microbiological analysis of tunneled hemodialysis catheters isolated from patients receiving hemodialysis in Saskatchewan
10.1080/17460913.2024.2359879 · 2024 · External reference
Detection of hidden antibiotic resistance through real-time genomics
10.1038/s41467-024-49851-4 · 2024 · External reference
Targeted sequencing of Enterobacterales bacteria using CRISPR-Cas9 enrichment and Oxford Nanopore Technologies
10.1128/msystems.01413-24 · 2025 · External reference
Leveraging innovative diagnostics as a tool to contain superbugs
10.1007/s10482-025-02075-y · 2025 · External reference
CRISPR-based diagnostics
10.1038/s41551-021-00760-7 · 2021 · External reference
Integrating sequencing methods with machine learning for antimicrobial susceptibility testing in pediatric infections: current advances and future insights
10.3389/fmicb.2025.1528696 · 2025 · External reference
Bridging classical methodologies in Salmonella investigation with modern technologies: a comprehensive review
10.3390/microorganisms12112249 · 2024 · External reference
Application of nanopore sequencing in the diagnosis and treatment of pulmonary infections
10.1007/s40291-023-00669-8 · 2023 · External reference
Nanopore-based metagenomic sequencing in respiratory tract infection: a developing diagnostic platform
10.1007/s00408-023-00612-y · 2023 · External reference
Diagnostic accuracy of nanopore sequencing for detecting Mycobacterium tuberculosis and drug-resistant strains: a systematic review and meta-analysis
10.1038/s41598-025-90089-x · 2025 · External reference
Long-reads-based metagenomics in clinical diagnosis with a special focus on fungal infections
10.3389/fmicb.2021.708550 · 2021 · External reference
Nanopore-only Microbial Isolate Sequencing Solution (NO-MISS) associated extraction protocolsOxf
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Nanopore sequencing and its application to the study of microbial communities
10.1016/j.csbj.2021.02.020 · 2021 · External reference
Application of nanopore sequencing technology in the clinical diagnosis of infectious diseases
10.3967/bes2022.054 · 2022 · External reference
Oxford nanopore sequencing in clinical microbiology and infection diagnostics
10.1093/bib/bbaa403 · 2021 · External reference
Species-resolved profiling of antibiotic resistance genes in complex metagenomes through long-read overlapping with Argo
10.1038/s41467-025-57088-y · 2025 · External reference
BALROG-MON: a high-throughput pipeline for Bacterial AntimicrobiaL Resistance annOtation of Genomes-Metagenomic Oxford Nanopore
10.17912/micropub.biology.001427 · 2025 · External reference
Real-time plasmid transmission detection pipeline
10.1128/spectrum.02100-24 · 2024 · External reference
Next-generation diagnostics of bloodstream infections enabled by rapid whole-genome sequencing of bacterial cells purified from blood cultures
10.1016/j.ebiom.2025.105633 · 2025 · External reference
Impact of rapid antibiotic susceptibility testing for Gram-negative bacteremia varies by pathogen type and resistance: a secondary analysis of the RAPIDS GN trial
10.1128/spectrum.01789-24 · 2025 · External reference
Application of rapid nanopore metagenomic cell-free DNA sequencing to diagnose bloodstream infections: a prospective observational study
10.1128/spectrum.03295-24 · 2025 · External reference
Development of a clinical metagenomics workflow for the diagnosis of wound infections
10.1186/s12920-024-02044-w · 2024 · External reference
A viral metagenomic protocol for nanopore sequencing of group A rotavirus
10.2139/ssrn.4157321 · 2023 · External reference
An Oxford Nanopore Technology-based hepatitis B virus sequencing protocol suitable for genomic surveillance within clinical diagnostic settings
10.3390/ijms252111702 · 2024 · External reference
MARVEL-minimising the emergence and dissemination of HIV-1 drug resistance in Portuguese-speaking African countries (PALOP): low-cost portable NGS platform for HIV-1 surveillance in Africa
10.1186/s12879-024-09803-1 · 2024 · External reference
Evaluating metagenomics and targeted approaches for diagnosis and surveillance of viruses
10.1186/s13073-024-01380-x · 2024 · External reference
Susceptibility to lenacapavir among newly diagnosed HIV-positive patients followed up in Mozambique that presented with primary antiretroviral resistance to other classes
10.1002/jmv.70317 · 2025 · External reference
Evaluation of a next generation sequencing assay for hepatitis B antiviral drug resistance on the Oxford Nanopore system
10.1016/j.jcv.2025.105762 · 2025 · External reference
High prevalence of reverse transcriptase inhibitors associated resistance mutations among people living with HIV on dolutegravir-based antiretroviral therapy in Francistown, Botswana
10.1093/jac/dkae472 · 2025 · External reference
Long-read RNA sequencing identifies polyadenylation elongation and differential transcript usage of host transcripts during SARS-CoV-2 in vitro infection
10.3389/fimmu.2022.832223 · 2022 · External reference
Long-read RNA sequencing of archival tissues reveals novel genes and transcripts associated with clear cell renal cell carcinoma recurrence and immune evasion
10.1101/gr.278801.123 · 2024 · External reference
Application of long read sequencing to determine expressed antigen diversity in Trypanosoma brucei infections
10.1371/journal.pntd.0007262 · 2019 · External reference
Genome drafting of nosocomial infection CRE Klebsiella pneumoniae confirming resistance to colistin and eravacycline, carrying bla NDM-1, mcr-1, and bla KPC-2, in neonatology from November to December 2023
10.3389/fcimb.2024.1528017 · 2024 · External reference
The rapid detection of a neonatal unit outbreak of a wild-type Klebsiella variicola using decentralized Oxford Nanopore sequencing
10.21203/rs.3.rs-5147341/v1 · 2025 · External reference
Nosocomial outbreak due to a novel sequence type of carbapenem-resistant Acinetobacter seifertii
10.1016/j.ajic.2024.11.019 · 2025 · External reference
Integrated analysis of patient networks and plasmid genomes to investigate a regional, multispecies outbreak of carbapenemase-producing Enterobacterales carrying both blaIMP and mcr-9 genes
10.1093/infdis/jiae019 · 2024 · External reference
Simultaneous clonal spread of NDM-1-producing Pseudomonas aeruginosa ST773 from Ukrainian patients in the Netherlands and Spain
10.1186/s13073-024-01412-6 · 2024 · External reference
Genomic surveillance of multidrug-resistant organisms based on long-read sequencing
10.1186/s13073-024-01412-6 · 2024 · External reference
Mycobacterium tuberculosis pseudo-outbreak due to laboratory cross-contamination: a molecular epidemiology outbreak investigation
10.14745/ccdr.v50i12da03 · 2024 · External reference
Field evaluation of nanopore targeted next-generation sequencing to predict drug-resistant tuberculosis from native sputum in South Africa and Zambia
10.1128/jcm.01390-24 · 2025 · External reference
Evaluating culture-free targeted next-generation sequencing for diagnosing drug-resistant tuberculosis: a multicentre clinical study of two end-to-end commercial workflows
10.1016/s1473-3099(24)00586-3 · 2025 · External reference
Progress in malaria genomic surveillance using long-read sequencing
10.1016/j.pt.2024.10.001 · 2024 · External reference
A retrospective genomic characterisation of the 2022 mpox outbreak in Belgium, and in vitro assessment of three antiviral compounds
10.1016/j.ebiom.2024.105488 · 2024 · External reference
Analyses of early ZIKV genomes are consistent with viral spread from Northeast Brazil to the Americas
10.20944/preprints202304.0343.v1 · 2023 · External reference
Genomic diversity of SARS-CoV-2 in Oxford during United Kingdom’s first national lockdown
10.1038/s41598-021-01022-x · 2021 · External reference
A high scale SARS-CoV-2 profiling by its whole-genome sequencing using Oxford Nanopore Technology in Kazakhstan
10.3389/fgene.2022.906318 · 2022 · External reference
Molecular and genomic investigation of an urban outbreak of dengue virus serotype 2 in Angola, 2017-2019
10.1371/journal.pntd.0010255 · 2022 · External reference
Characterization of Vibrio cholerae from the Jukskei River in Johannesburg, South Africa
10.1016/j.ijid.2024.107662 · 2025 · External reference
Air monitoring by nanopore sequencing
10.1093/ismeco/ycae099 · 2024 · External reference
‘Longing’ for the next generation of liquid biopsy: The diagnostic potential of long cell-free DNA in oncology and prenatal testing
10.1007/s40291-023-00661-2 · 2023 · External reference
Cancer liquid biopsies by Oxford Nanopore Technologies sequencing of cell-free DNA: From basic research to clinical applications
10.1186/s12943-024-02178-6 · 2024 · External reference
Applications of Nanopore sequencing in precision cancer medicine
10.1002/ijc.35100 · 2024 · External reference
Oxford Nanopore Technology and its application in liquid biopsies
10.2174/0113892029286632231127055733 · 2023 · External reference
Improved structural variant interpretation for hereditary cancer susceptibility using long-read sequencing
10.1038/s41436-020-0880-8 · 2020 · External reference
Nanopore targeted sequencing for rapid gene mutations detection in acute myeloid leukemia
10.3390/genes10121026 · 2019 · External reference
High resolution copy number inference in cancer using short-molecule nanopore sequencing
10.1093/nar/gkab812 · 2021 · External reference
TP53 gene mutation analysis in chronic lymphocytic leukemia by nanopore MinION sequencing
10.1186/s13000-016-0550-y · 2016 · External reference
Design and MinION testing of a nanopore targeted gene sequencing panel for chronic lymphocytic leukemia
10.1038/s41598-018-30330-y · 2018 · External reference
Nanopore sequencing sheds a light on the FLT3 gene mutations complexity in acute promyelocytic leukemia
10.1080/10428194.2020.1856838 · 2021 · External reference
Diagnosing intravascular B-cell lymphoma using nanopore sequencing of cell-free DNA from cerebrospinal fluid
10.1016/j.esmoop.2024.103974 · 2024 · External reference
Nanopore sequencing approach for immunoglobulin gene analysis in chronic lymphocytic leukemia
10.1038/s41598-021-97198-3 · 2021 · External reference
Nanopore sequencing of clonal IGH rearrangements in cell-free DNA as a biomarker for acute lymphoblastic leukemia
10.3389/fonc.2022.958673 · 2022 · External reference
Genomic BCR-ABL1 breakpoint characterization by a multi-strategy approach for “personalized monitoring” of residual disease in chronic myeloid leukemia patients
10.18632/oncotarget.23971 · 2018 · External reference
Acute leukemia classification using transcriptional profiles from low-cost nanopore mRNA sequencing
10.1200/po.21.00326 · 2022 · External reference
Nanopore sequencing as a scalable, cost-effective platform for analyzing polyclonal vector integration sites following clinical T cell therapy
10.1136/jitc-2019-000299 · 2020 · External reference
A comprehensive overview of FCGR3A gene variability by full-length gene sequencing including the identification of V158F polymorphism
10.1038/s41598-018-34258-1 · 2018 · External reference
Electronic DNA analysis of CSF cell-free tumor DNA to quantify multi-gene molecular response in pediatric high-grade glioma
10.1158/1078-0432.ccr-20-2066 · 2020 · External reference
Same-day genomic and epigenomic diagnosis of brain tumors using real-time nanopore sequencing
10.1007/s00401-017-1743-5 · 2017 · External reference
Defining the heterogeneity of unbalanced structural variation underlying breast cancer susceptibility by nanopore genome sequencing
10.1038/s41431-023-01284-1 · 2023 · External reference
Multi-dimensional cell-free DNA-based liquid biopsy for sensitive early detection of gastric cancer
10.1186/s13073-024-01352-1 · 2024 · External reference
Accurate detection of circulating tumor DNA using nanopore consensus sequencing
10.1038/s41525-021-00272-y · 2021 · External reference
Tissue and plasma-based highly sensitive blocker displacement amplicon nanopore sequencing for EGFR mutations in lung cancer
10.4143/crt.2023.1108 · 2024 · External reference
Genome-wide mutational signatures in low-coverage whole genome sequencing of cell-free DNA
10.1038/s41467-022-32598-1 · 2022 · External reference
Nanopore sequencing from liquid biopsy: Analysis of copy number variations from cell-free DNA of lung cancer patients
10.1186/s12943-021-01327-5 · 2021 · External reference
Classification of brain tumors by nanopore sequencing of cell-free DNA from cerebrospinal fluid
10.1093/clinchem/hvad115 · 2024 · External reference
Real-time analysis of the cancer genome and fragmentome from plasma and urine cell-free DNA using nanopore sequencing
10.1101/2022.08.11.22278674 · 2023 · External reference
Nanopore-based consensus sequencing enables accurate multimodal tumor cell-free DNA profiling
10.1101/gr.279144.124 · 2025 · External reference
Detecting cell-of-origin and cancer-specific methylation features of cell-free DNA from nanopore sequencing
10.1186/s13059-022-02710-1 · 2022 · External reference
Comparison of single molecule, real-time sequencing and nanopore sequencing for analysis of the size, end-motif, and tissue-of-origin of long cell-free DNA in plasma
10.1093/clinchem/hvac180 · 2023 · External reference
Single-molecule methylation profiles of cell-free DNA in cancer with nanopore sequencing
10.1186/s13073-023-01178-3 · 2023 · External reference
SpecHLA enables full-resolution HLA typing from sequencing data
10.1016/j.crmeth.2023.100589 · 2023 · External reference
Using long-read CAGE sequencing to profile cryptic-promoter-derived transcripts and their contribution to the immunopeptidome
10.1101/gr.277061.122 · 2023 · External reference
Unresolved reference
2024 · External reference
Integrative genotyping of cancer and immune phenotypes by long-read sequencing
10.1038/s41467-023-44137-7 · 2024 · External reference
Ultra-rapid somatic variant detection via real-time targeted amplicon sequencing
10.1038/s42003-022-03657-6 · 2022 · External reference
Rapid brain tumor classification from sparse epigenomic data
10.1038/s41591-024-03435-3 · 2025 · External reference
Ultra-fast deep-learned CNS tumour classification during surgery
10.1038/s41586-023-06615-2 · 2023 · External reference
Solving the unsolved rare diseases in Europe
10.1038/s41431-021-00924-8 · 2021 · External reference
Unraveling structural rearrangements of the CFH gene cluster in atypical hemolytic uremic syndrome patients using molecular combing and long-fragment targeted sequencing
10.1016/j.jmoldx.2022.02.006 · 2022 · External reference
Long-read genome sequencing identifies causal structural variation in a Mendelian disease
10.1038/gim.2017.86 · 2018 · External reference
Evaluation of the detection of GBA missense mutations and other variants using the Oxford Nanopore MinION
10.1002/mgg3.564 · 2019 · External reference
Targeted long-read sequencing as a single assay improves the diagnosis of spastic-ataxia disorders
10.1101/2024.09.04.24312938 · 2025 · External reference
Nanopore-based single molecule sequencing of the D4Z4 array responsible for facioscapulohumeral muscular dystrophy
10.1016/j.jns.2017.08.3500 · 2017 · External reference
Molecular dissection of structural variations involved in antithrombin deficiency
10.1016/j.jmoldx.2022.01.009 · 2022 · External reference
Advancing long-read nanopore genome assembly and accurate variant calling for rare disease detection
10.1016/j.ajhg.2025.01.002 · 2025 · External reference
Long read sequencing enhances pathogenic and novel variation discovery in patients with rare diseases
10.1038/s41467-025-57695-9 · 2025 · External reference
The implementation of genome sequencing in rare genetic diseases diagnosis: A pilot study from the Hong Kong genome project
10.1016/j.lanwpc.2025.101473 · 2025 · External reference
Scalable nanopore sequencing of human genomes provides a comprehensive view of haplotype-resolved variation and methylation
10.1038/s41592-023-01993-x · 2023 · External reference
The additional diagnostic yield of long-read sequencing in undiagnosed rare diseases
10.1101/gr.279970.124 · 2025 · External reference
Ultrarapid nanopore genome sequencing in a critical care setting
10.1056/nejmc2112090 · 2022 · External reference
Accelerated identification of disease-causing variants with ultra-rapid nanopore genome sequencing
10.1038/s41587-022-01221-5 · 2022 · External reference
Clinical epigenomics: genome-wide DNA methylation analysis for the diagnosis of Mendelian disorders
10.1038/s41436-020-01096-4 · 2021 · External reference
Novel diagnostic DNA methylation episignatures expand and refine the epigenetic landscapes of Mendelian disorders
10.1016/j.xhgg.2021.100075 · 2022 · External reference
3-hour genome sequencing and targeted analysis to rapidly assess genetic risk
10.1016/j.gimo.2024.101833 · 2024 · External reference
Diagnosis of genetic diseases in seriously ill children by rapid whole-genome sequencing and automated phenotyping and interpretation
10.1126/scitranslmed.aat6177 · 2019 · External reference
Singleton rapid long-read genome sequencing as first tier genetic test for critically ill children with suspected genetic diseases
10.1038/s41431-025-01818-9 · 2025 · External reference
Rapid sequencing-based diagnosis of thiamine metabolism dysfunction syndrome
10.1056/nejmc2100365 · 2021 · External reference
Benchmarking nanopore sequencing and rapid genomics feasibility: validation at a quaternary hospital in New Zealand
10.1038/s41525-024-00445-5 · 2024 · External reference
Analysis of preimplantation and clinical outcomes of two cases by Oxford Nanopore sequencing
10.1007/s43032-024-01470-6 · 2024 · External reference
Long-read sequencing identified a causal structural variant in an exome-negative case and enabled preimplantation genetic diagnosis
10.1186/s41065-018-0069-1 · 2018 · External reference
Rapid short-read sequencing and aneuploidy detection using MinION nanopore technology
10.1534/genetics.115.182311 · 2016 · External reference
Nanopore sequencing with T2T-CHM13 for accurate detection and preventing the transmission of structural rearrangements in highly repetitive heterochromatin regions in human embryos
10.1002/ctm2.1612 · 2024 · External reference
Long-read sequencing identifies novel pathogenic intronic variants in Gitelman syndrome
10.1681/asn.2022050627 · 2023 · External reference
Detection and annotation of transposable element insertions and deletions on the human genome using nanopore sequencing
10.1016/j.isci.2023.108214 · 2023 · External reference
Nanopore long-read next-generation sequencing for detection of mitochondrial DNA large-scale deletions
10.3389/fgene.2023.1089956 · 2023 · External reference
Multiple GYPB gene deletions associated with the U- phenotype in those of African ancestry
10.1111/trf.15839 · 2020 · External reference
Nanopore-based technologies beyond DNA sequencing
10.1038/s41565-022-01193-2 · 2022 · External reference
Nanopore DNA sequencing technologies and their applications towards single-molecule proteomics
10.1038/s41557-023-01322-x · 2024 · External reference
Comparative analysis of metagenomic classifiers for long-read sequencing datasets
10.1186/s12859-024-05634-8 · 2024 · External reference
Method of the year 2022: long-read sequencing
10.1038/s41592-022-01759-x · 2023 · External reference
Oxford Nanopore R10.4 long-read sequencing enables the generation of near-finished bacterial genomes from pure cultures and metagenomes without short-read or reference polishing
10.1038/s41592-022-01539-7 · 2022 · External reference
Benchmarking of Nanopore R10.4 and R9.4.1 flow cells in single-cell whole-genome amplification and whole-genome shotgun sequencing
10.1016/j.csbj.2023.03.038 · 2023 · External reference
The newest Oxford Nanopore R10.4.1 full-length 16S rRNA sequencing enables the accurate resolution of species-level microbial community profiling
10.1128/aem.00605-23 · 2023 · External reference
Revolutionising high resolution HLA genotyping for transplant assessment: validation, implementation and challenges of Oxford Nanopore Technologies’ Q20+ sequencing
10.1111/tan.15725 · 2024 · External reference
Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction
10.1099/mgen.0.000910 · 2023 · External reference
Adoption of cloud computing as innovation in the organization
10.1177/18479790221093992 · 2022 · External reference
Nanopore sequencing of 1000 Genomes Project samples to build a comprehensive catalog of human genetic variation
10.1101/gr.279273.124 · 2024 · External reference
Long-read sequencing of an advanced cancer cohort resolves rearrangements, unravels haplotypes, and reveals methylation landscapes
10.1016/j.xgen.2024.100674 · 2024 · External reference
Personalized pangenome references
10.1038/s41592-024-02407-2 · 2024 · External reference
Utility of long-read sequencing for All of Us
10.1038/s41467-024-44804-3 · 2024 · External reference
Unresolved reference
2025 · External reference
A very big challenge”: a qualitative study to explore the early barriers and enablers to implementing a national genomic medicine service in England
10.3389/fgene.2023.1282034 · 2024 · External reference
Genomic data in the All of Us Research Program
10.1038/s41586-023-06957-x · 2024 · External reference
