Research graph
References from A systems microbiology framework for reproducible multi-dataset omics integration with application to long COVID. Local targets link to admitted publications; unresolved targets remain external evidence.
Robust biomarker identification for cancer diagnosis with ensemble feature selection methods
10.1093/bioinformatics/btp630 · 2010 · External reference
Unresolved reference
External reference
Long covid involves activation of proinflammatory and immune exhaustion pathways
10.1038/s41590-025-02353-x · 2025 · External reference
Translating insights into therapies for long covid
10.1126/scitranslmed.ado2106 · 2024 · External reference
Multiple hypothesis testing for pre-screening of factor selection for classification of high-dimensional data
10.1016/j.jprocont.2025.103469 · 2025 · External reference
Controlling the false discovery rate: a practical and powerful approach to multiple testing
10.1111/j.2517-6161.1995.tb02031.x · 1995 · External reference
Antibiotic intervention affects maternal immunity during gestation in mice
10.3389/fimmu.2021.685742 · 2021 · External reference
Neural networks for pattern recognition
10.1093/oso/9780198538493.001.0001 · 1995 · External reference
Unresolved reference
2022 · External reference
Dgidb 5.0: rebuilding the drug–gene interaction database for precision medicine and drug discovery platforms
10.1093/nar/gkad1040 · 2024 · External reference
Oxaloacetate treatment for mental and physical fatigue in myalgic encephalomyelitis/chronic fatigue syndrome (me/cfs) and long-covid fatigue patients: a non-randomized controlled clinical trial
10.1186/s12967-022-03488-3 · 2022 · External reference
Unresolved reference
2026 · External reference
Registered clinical trials investigating treatment of long covid: a scoping review and recommendations for research
10.1080/23744235.2022.2043560 · 2022 · External reference
Graph convolutional network-based feature selection for high-dimensional and low-sample size data
10.1093/bioinformatics/btad135 · 2023 · External reference
Use of 1-mna to improve exercise tolerance and fatigue in patients after covid-19
10.3390/nu14153004 · 2022 · External reference
Unresolved reference
2021 · External reference
Long covid management: a mini review of current recommendations and underutilized modalities
10.3389/fmed.2024.1430444 · 2024 · External reference
Multiple comparisons among means
10.1080/01621459.1961.10482090 · 1961 · External reference
Immune exhaustion in me/cfs and long covid
10.1172/jci.insight.183810 · 2024 · External reference
Unresolved reference
External reference
Is antiviral treatment at the acute phase of covid-19 effective for decreasing the risk of long-covid? A systematic review
10.1007/s15010-023-02154-0 · 2024 · External reference
Echs1: pathogenic mechanisms, experimental models, and emerging therapeutic strategies
10.1186/s13023-025-03959-y · 2025 · External reference
Immune and metabolic signatures of covid-19 revealed by transcriptomics data reuse
10.3389/fimmu.2020.01636 · 2020 · External reference
Gene selection for cancer classification using support vector machines
10.1023/a:1012487302797 · 2002 · External reference
Global prevalence of long covid, its subtypes and risk factors: an updated systematic review and meta-analysis, medRxivPreprint, not peer-reviewed
10.1093/ofid/ofaf533 · 2025 · External reference
Unresolved reference
2011 · External reference
Atorvastatin versus placebo in patients with covid-19 in intensive care: randomized controlled trial
10.1136/bmj-2021-068407 · 2022 · External reference
Low-dose naltrexone and nad+ for the treatment of patients with persistent fatigue symptoms after covid-19
10.1016/j.bbih.2024.100733 · 2024 · External reference
Predictive factors for allergy at 4–6 years of age based on machine learning: a pilot study
10.1016/j.phanu.2022.100326 · 2023 · External reference
A robust mrna signature obtained via recursive ensemble feature selection predicts the responsiveness of omalizumab in moderate-to-severe asthma
10.1002/clt2.12306 · 2023 · External reference
Drugbank 6.0: the drugbank knowledgebase for 2024
10.1093/nar/gkad976 · 2024 · External reference
Long covid and its management
10.7150/ijbs.75056 · 2022 · External reference
Open targets: a platform for therapeutic target identification and validation
10.1093/nar/gkw1055 · 2017 · External reference
Boruta–a system for feature selection
10.3233/fi-2010-288 · 2010 · External reference
On the entropy of continuous probability distributions (corresp.)
10.1109/tit.1978.1055832 · 1978 · External reference
Machine learning and systems genomics approaches for multi-omics data
10.1186/s40364-017-0082-y · 2017 · External reference
Unresolved reference
2017 · External reference
Automatic discovery of 100-mirna signature for cancer classification using ensemble feature selection
10.1186/s12859-019-3050-8 · 2019 · External reference
Machine learning-based ensemble recursive feature selection of circulating mirnas for cancer tumor classification
10.3390/cancers12071785 · 2020 · External reference
Unresolved reference
2017 · External reference
Inhalation of sodium pyruvate to reduce the symptoms and severity of respiratory diseases including covid-19, long covid, and pulmonary fibrosis
2021 · External reference
Double-blind placebo-controlled randomized clinical trial to assess the efficacy of montelukast in mild to moderate respiratory symptoms of patients with long covid: E-speranza covid project study protocol
10.1186/s13063-021-05951-w · 2022 · External reference
Recursive ensemble feature selection provides a robust mrna expression signature for myalgic encephalomyelitis/chronic fatigue syndrome
10.1038/s41598-021-83660-9 · 2021 · External reference
Beyond the limitation of targeted therapy: improve the application of targeted drugs combining genomic data with machine learning
10.1016/j.phrs.2020.104932 · 2020 · External reference
Host metabolic reprogramming in response to sars-cov-2 infection: a systems biology approach
10.1016/j.micpath.2021.105114 · 2021 · External reference
Machine learning-aided risk stratification in philadelphia chromosome-positive acute lymphoblastic leukemia
10.1186/s40364-021-00268-x · 2021 · External reference
Measuring the stability of feature selection
10.1007/978-3-319-46227-1_28 · 2016 · External reference
Large-scale multi-omic analysis of covid-19 severity
10.1016/j.cels.2020.10.003 · 2021 · External reference
Scikit-learn: machine learning in python
10.5555/1953048.2078195 · 2011 · External reference
A robust microbiome signature for autism spectrum disorder across different studies using machine learning
10.1038/s41598-023-50601-7 · 2024 · External reference
Comparison of multivariate anova-based approaches for the determination of relevant variables in experimentally designed metabolomic studies
10.3390/molecules27103304 · 2022 · External reference
Blood transcriptomic analyses do not support SARS-CoV-2 persistence in patients with post-COVID-19 condition with chronic fatigue syndrome
10.1016/j.lanmic.2024.101012 · 2025 · External reference
Statistical analysis of high-dimensional biomedical data: a gentle introduction to analytical goals, common approaches and challenges
10.1186/s12916-023-02858-y · 2023 · External reference
Long covid: an overview
10.1016/j.dsx.2021.04.007 · 2021 · External reference
Multi-objective evolutionary discretization of gene expression profiles: application to covid-19 severity prediction
10.1007/978-3-031-30229-9_45 · 2023 · External reference
Methodology for biomarker discovery with reproducibility in microbiome data using machine learning
10.1186/s12859-024-05639-3 · 2024 · External reference
Matthews correlation coefficient-based feature ranking in recursive ensemble feature selection for high-dimensional and low-sample size data
10.1016/j.mlwa.2025.100757 · External reference
Understanding parkinson’s: the microbiome and machine learning approach
10.1016/j.maturitas.2024.108185 · External reference
Unresolved reference
External reference
Unresolved reference
External reference
Measures of diagnostic accuracy: basic definitions
2009 · External reference
Pathway-based genomics prediction using generalized elastic net
10.1371/journal.pcbi.1004790 · 2016 · External reference
Regression shrinkage and selection via the lasso
10.1111/j.2517-6161.1996.tb02080.x · 1996 · External reference
Galgo: an r package for multivariate variable selection using genetic algorithms
10.1093/bioinformatics/btl074 · 2006 · External reference
Machine learning algorithm validation with a limited sample size
10.1371/journal.pone.0224365 · 2019 · External reference
Applications of machine learning in drug discovery and development
10.1038/s41573-019-0024-5 · 2019 · External reference
Some desirable properties of the bonferroni correction: is the bonferroni correction really so bad?
10.1093/aje/kwy250 · 2019 · External reference
Transcriptional and proteomic insights into the host response in fatal covid-19 cases
10.1073/pnas.2018030117 · 2020 · External reference
Increased interleukin-6 is associated with long covid-19: a systematic review and meta-analysis
10.1186/s40249-023-01086-z · 2023 · External reference
An overview of overfitting and its solutions
10.1088/1742-6596/1168/2/022022 · 2019 · External reference
Assessing and mitigating batch effects in large-scale omics studies
10.1186/s13059-024-03401-9 · 2024 · External reference
The clinicaltrials. gov results database—update and key issues
10.1056/nejmsa1012065 · 2011 · External reference
A machine learning-based model to predict pod24 in follicular lymphoma: a study by the chinese workshop on follicular lymphoma
10.1186/s40364-024-00716-4 · 2025 · External reference
Machine learning-based radiomics model: prognostic prediction and mechanism exploration in patients with endometrial cancer
10.1186/s40364-025-00836-5 · 2025 · External reference
Prediction of drug targets for specific diseases leveraging gene perturbation data: a machine learning approach
10.3390/pharmaceutics14020234 · 2022 · External reference
